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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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HOW TO USE
Anticodon table
[OHVX] human gut metagenome; feces
Number of tRNA genes
T
C
A
G
T
phe
AAA
0
Ser
AGA
0
Tyr
ATA
0
Cys
ACA
0
T
GAA
10
GGA
10
GTA
15
GCA
12
C
Leu
TAA
18
TGA
13
ochre
TTA
0
opal Sec
TCA
4
A
CAA
14
CGA
16
amber
CTA
0
Trp
CCA
17
G
C
Leu
AAG
5
Pro
AGG
2
His
ATG
0
Arg
ACG
15
T
GAG
9
GGG
8
GTG
15
GCG
0
C
TAG
16
TGG
18
Gln
TTG
15
TCG
0
A
CAG
12
CGG
15
CTG
13
CCG
11
G
A
Ile
AAT
0
Thr
AGT
0
Asn
ATT
0
Ser
ACT
0
T
GAT
13
GGT
13
GTT
13
GCT
16
C
TAT
2
TGT
13
Lys
TTT
12
Arg
TCT
10
A
Met
CAT
40
CGT
14
CTT
13
CCT
14
G
G
Val
AAC
0
Ala
AGC
0
Asp
ATC
0
Gly
ACC
0
T
GAC
8
GGC
7
GTC
12
GCC
12
C
TAC
13
TGC
15
Glu
TTC
14
TCC
14
A
CAC
6
CGC
6
CTC
12
CCC
13
G
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