This is the navigation skips to jump to main contents
Jump to main contents.
tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
Top
|
Keyword
|
BLAST
|
Download
|
HOW TO USE
tRNA gene List
[LSQA] termite gut metagenome; viral DNA filtered from gut of termites from termite colony 3
HIT:
100 sequence(s).
Download Sequence
View ClustalW result
The reliable tRNA genes
All candidate tRNA genes
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
>WENV170716458
LSQA01009174
[LSQA] termite gut metagenome; viral DNA filtered from gut of termites from termite colony 3
52
126
+
Met
CAT
[ENA]
¢þ
>WENV170716459
LSQA01009174
[LSQA] termite gut metagenome; viral DNA filtered from gut of termites from termite colony 3
175
249
+
Met
CAT
[ENA]
¢þ
>WENV170716419
LSQA01000867
[LSQA] termite gut metagenome; viral DNA filtered from gut of termites from termite colony 3
188
260
+
Glu
TTC
[ENA]
¢þ
>WENV170716446
LSQA01004074
[LSQA] termite gut metagenome; viral DNA filtered from gut of termites from termite colony 3
215
140
-
Thr
CGT
[ENA]
¢þ
>WENV170716444
LSQA01003810
[LSQA] termite gut metagenome; viral DNA filtered from gut of termites from termite colony 3
215
289
+
Glu
TTC
[ENA]
¢þ
>WENV170716457
LSQA01008810
[LSQA] termite gut metagenome; viral DNA filtered from gut of termites from termite colony 3
219
146
-
Arg
ACG
[ENA]
¢þ
>WENV170716449
LSQA01004852
[LSQA] termite gut metagenome; viral DNA filtered from gut of termites from termite colony 3
230
146
-
Leu
GAG
[ENA]
¢þ
>WENV170716456
LSQA01008565
[LSQA] termite gut metagenome; viral DNA filtered from gut of termites from termite colony 3
240
156
-
Leu
TAG
[ENA]
¢þ
>WENV170716439
LSQA01003417
[LSQA] termite gut metagenome; viral DNA filtered from gut of termites from termite colony 3
263
188
-
Asn
GTT
[ENA]
¢þ
>WENV170716416
LSQA01000753
[LSQA] termite gut metagenome; viral DNA filtered from gut of termites from termite colony 3
263
338
+
Pro
TGG
[ENA]
¢þ
>WENV170716436
LSQA01002832
[LSQA] termite gut metagenome; viral DNA filtered from gut of termites from termite colony 3
272
194
-
Pro
TGG
[ENA]
¢þ
>WENV170716453
LSQA01007536
[LSQA] termite gut metagenome; viral DNA filtered from gut of termites from termite colony 3
272
196
-
Ala
CGC
[ENA]
¢þ
>WENV170716441
LSQA01003690
[LSQA] termite gut metagenome; viral DNA filtered from gut of termites from termite colony 3
280
354
+
Glu
TTC
[ENA]
¢þ
>WENV170716454
LSQA01008144
[LSQA] termite gut metagenome; viral DNA filtered from gut of termites from termite colony 3
286
358
+
Pro
TGG
[ENA]
¢þ
>WENV170716447
LSQA01004285
[LSQA] termite gut metagenome; viral DNA filtered from gut of termites from termite colony 3
308
233
-
Arg
TCT
[ENA]
¢þ
>WENV170716455
LSQA01008410
[LSQA] termite gut metagenome; viral DNA filtered from gut of termites from termite colony 3
317
245
-
Glu
CTC
[ENA]
¢þ
>WENV170716440
LSQA01003652
[LSQA] termite gut metagenome; viral DNA filtered from gut of termites from termite colony 3
356
281
-
Met
CAT
[ENA]
¢þ
>WENV170716442
LSQA01003690
[LSQA] termite gut metagenome; viral DNA filtered from gut of termites from termite colony 3
361
436
+
Met
CAT
[ENA]
¢þ
>WENV170716451
LSQA01006656
[LSQA] termite gut metagenome; viral DNA filtered from gut of termites from termite colony 3
366
292
-
Asn
GTT
[ENA]
¢þ
>WENV170716430
LSQA01001305
[LSQA] termite gut metagenome; viral DNA filtered from gut of termites from termite colony 3
367
293
-
His
GTG
[ENA]
¢þ
>WENV170716448
LSQA01004745
[LSQA] termite gut metagenome; viral DNA filtered from gut of termites from termite colony 3
377
292
-
Asn
GTT
[ENA]
¢þ
>WENV170716445
LSQA01003810
[LSQA] termite gut metagenome; viral DNA filtered from gut of termites from termite colony 3
380
454
+
Asp
GTC
[ENA]
¢þ
>WENV170716452
LSQA01006801
[LSQA] termite gut metagenome; viral DNA filtered from gut of termites from termite colony 3
408
481
+
Asp
GTC
[ENA]
¢þ
>WENV170716450
LSQA01005124
[LSQA] termite gut metagenome; viral DNA filtered from gut of termites from termite colony 3
433
509
+
Pro
TGG
[ENA]
¢þ
>WENV170716438
LSQA01003173
[LSQA] termite gut metagenome; viral DNA filtered from gut of termites from termite colony 3
456
530
+
Met
CAT
[ENA]
¢þ
>WENV170716435
LSQA01002587
[LSQA] termite gut metagenome; viral DNA filtered from gut of termites from termite colony 3
494
568
+
Thr
TGT
[ENA]
¢þ
>WENV170716443
LSQA01003690
[LSQA] termite gut metagenome; viral DNA filtered from gut of termites from termite colony 3
520
596
+
Ile
TAT
[ENA]
¢þ
>WENV170716423
LSQA01001091
[LSQA] termite gut metagenome; viral DNA filtered from gut of termites from termite colony 3
565
643
+
Ile
GAT
[ENA]
¢þ
>WENV170716420
LSQA01000867
[LSQA] termite gut metagenome; viral DNA filtered from gut of termites from termite colony 3
584
671
+
Ser
TGA
[ENA]
¢þ
>WENV170716428
LSQA01001093
[LSQA] termite gut metagenome; viral DNA filtered from gut of termites from termite colony 3
645
571
-
Ile
GAT
[ENA]
¢þ
>WENV170716437
LSQA01002985
[LSQA] termite gut metagenome; viral DNA filtered from gut of termites from termite colony 3
653
578
-
Arg
TCT
[ENA]
¢þ
>WENV170716424
LSQA01001091
[LSQA] termite gut metagenome; viral DNA filtered from gut of termites from termite colony 3
653
729
+
Asp
GTC
[ENA]
¢þ
>WENV170716431
LSQA01001576
[LSQA] termite gut metagenome; viral DNA filtered from gut of termites from termite colony 3
687
604
-
Leu
TAA
[ENA]
¢þ
>WENV170716432
LSQA01001678
[LSQA] termite gut metagenome; viral DNA filtered from gut of termites from termite colony 3
728
653
-
Met
CAT
[ENA]
¢þ
>WENV170716433
LSQA01001971
[LSQA] termite gut metagenome; viral DNA filtered from gut of termites from termite colony 3
745
672
-
Gly
TCC
[ENA]
¢þ
>WENV170716434
LSQA01002399
[LSQA] termite gut metagenome; viral DNA filtered from gut of termites from termite colony 3
774
846
+
Glu
TTC
[ENA]
¢þ
>WENV170716429
LSQA01001180
[LSQA] termite gut metagenome; viral DNA filtered from gut of termites from termite colony 3
939
1015
+
Val
GAC
[ENA]
¢þ
>WENV170716415
LSQA01000373
[LSQA] termite gut metagenome; viral DNA filtered from gut of termites from termite colony 3
972
900
-
Gln
TTG
[ENA]
¢þ
>WENV170716417
LSQA01000753
[LSQA] termite gut metagenome; viral DNA filtered from gut of termites from termite colony 3
1139
1220
+
Leu
TAG
[ENA]
¢þ
>WENV170716422
LSQA01001021
[LSQA] termite gut metagenome; viral DNA filtered from gut of termites from termite colony 3
1265
1191
-
Gln
TTG
[ENA]
¢þ
>WENV170716418
LSQA01000753
[LSQA] termite gut metagenome; viral DNA filtered from gut of termites from termite colony 3
1297
1371
+
Glu
TTC
[ENA]
¢þ
>WENV170716427
LSQA01001093
[LSQA] termite gut metagenome; viral DNA filtered from gut of termites from termite colony 3
1311
1236
-
Thr
TGT
[ENA]
¢þ
>WENV170716426
LSQA01001093
[LSQA] termite gut metagenome; viral DNA filtered from gut of termites from termite colony 3
1485
1401
-
Leu
TAG
[ENA]
¢þ
>WENV170716425
LSQA01001093
[LSQA] termite gut metagenome; viral DNA filtered from gut of termites from termite colony 3
1564
1489
-
Phe
GAA
[ENA]
¢þ
>WENV170716421
LSQA01000906
[LSQA] termite gut metagenome; viral DNA filtered from gut of termites from termite colony 3
1750
1826
+
Arg
TCT
[ENA]
¢þ
>WENV170716414
LSQA01000214
[LSQA] termite gut metagenome; viral DNA filtered from gut of termites from termite colony 3
2526
2600
+
Met
CAT
[ENA]
¢þ
>WENV170716398
LSQA01000021
[LSQA] termite gut metagenome; viral DNA filtered from gut of termites from termite colony 3
3851
3775
-
Leu
TAA
[ENA]
¢þ
>WENV170716412
LSQA01000157
[LSQA] termite gut metagenome; viral DNA filtered from gut of termites from termite colony 3
4932
5019
+
Ser
TGA
[ENA]
¢þ
>WENV170716413
LSQA01000157
[LSQA] termite gut metagenome; viral DNA filtered from gut of termites from termite colony 3
5185
5260
+
Thr
TGT
[ENA]
¢þ
>WENV170716397
LSQA01000021
[LSQA] termite gut metagenome; viral DNA filtered from gut of termites from termite colony 3
8523
8448
-
Glu
TTC
[ENA]
¢þ
>WENV170716396
LSQA01000021
[LSQA] termite gut metagenome; viral DNA filtered from gut of termites from termite colony 3
8601
8527
-
His
GTG
[ENA]
¢þ
>WENV170716395
LSQA01000021
[LSQA] termite gut metagenome; viral DNA filtered from gut of termites from termite colony 3
8681
8606
-
Phe
GAA
[ENA]
¢þ
>WENV170716394
LSQA01000021
[LSQA] termite gut metagenome; viral DNA filtered from gut of termites from termite colony 3
8761
8686
-
Leu
TAG
[ENA]
¢þ
>WENV170716393
LSQA01000021
[LSQA] termite gut metagenome; viral DNA filtered from gut of termites from termite colony 3
8934
8858
-
Cys
GCA
[ENA]
¢þ
>WENV170716392
LSQA01000021
[LSQA] termite gut metagenome; viral DNA filtered from gut of termites from termite colony 3
9012
8936
-
Arg
ACG
[ENA]
¢þ
>WENV170716391
LSQA01000021
[LSQA] termite gut metagenome; viral DNA filtered from gut of termites from termite colony 3
9409
9333
-
Met
CAT
[ENA]
¢þ
>WENV170716390
LSQA01000021
[LSQA] termite gut metagenome; viral DNA filtered from gut of termites from termite colony 3
9489
9413
-
Arg
TCT
[ENA]
¢þ
>WENV170716409
LSQA01000077
[LSQA] termite gut metagenome; viral DNA filtered from gut of termites from termite colony 3
9578
9505
-
Gln
TTG
[ENA]
¢þ
>WENV170716389
LSQA01000021
[LSQA] termite gut metagenome; viral DNA filtered from gut of termites from termite colony 3
9686
9610
-
Ile
GAT
[ENA]
¢þ
>WENV170716411
LSQA01000134
[LSQA] termite gut metagenome; viral DNA filtered from gut of termites from termite colony 3
10253
10177
-
Ala
TGC
[ENA]
¢þ
>WENV170716406
LSQA01000075
[LSQA] termite gut metagenome; viral DNA filtered from gut of termites from termite colony 3
10300
10375
+
Arg
ACG
[ENA]
¢þ
>WENV170716410
LSQA01000134
[LSQA] termite gut metagenome; viral DNA filtered from gut of termites from termite colony 3
10340
10264
-
Ile
GAT
[ENA]
¢þ
>WENV170716407
LSQA01000075
[LSQA] termite gut metagenome; viral DNA filtered from gut of termites from termite colony 3
10379
10449
+
Gly
TCC
[ENA]
¢þ
>WENV170716365
LSQA01000002
[LSQA] termite gut metagenome; viral DNA filtered from gut of termites from termite colony 3
10616
10688
+
Asn
GTT
[ENA]
¢þ
>WENV170716366
LSQA01000002
[LSQA] termite gut metagenome; viral DNA filtered from gut of termites from termite colony 3
10792
10865
+
Ile
GAT
[ENA]
¢þ
>WENV170716367
LSQA01000002
[LSQA] termite gut metagenome; viral DNA filtered from gut of termites from termite colony 3
13518
13589
+
Gly
TCC
[ENA]
¢þ
>WENV170716408
LSQA01000075
[LSQA] termite gut metagenome; viral DNA filtered from gut of termites from termite colony 3
14784
14856
+
Pro
TGG
[ENA]
¢þ
>WENV170716399
LSQA01000025
[LSQA] termite gut metagenome; viral DNA filtered from gut of termites from termite colony 3
15918
15845
-
Gln
TTG
[ENA]
¢þ
>WENV170716388
LSQA01000021
[LSQA] termite gut metagenome; viral DNA filtered from gut of termites from termite colony 3
16144
16070
-
Gln
TTG
[ENA]
¢þ
>WENV170716376
LSQA01000020
[LSQA] termite gut metagenome; viral DNA filtered from gut of termites from termite colony 3
18581
18670
+
Ser
GCT
[ENA]
¢þ
>WENV170716387
LSQA01000021
[LSQA] termite gut metagenome; viral DNA filtered from gut of termites from termite colony 3
20160
20069
-
Ser
GCT
[ENA]
¢þ
>WENV170716374
LSQA01000003
[LSQA] termite gut metagenome; viral DNA filtered from gut of termites from termite colony 3
20688
20600
-
Leu
AAG
[ENA]
¢þ
>WENV170716373
LSQA01000003
[LSQA] termite gut metagenome; viral DNA filtered from gut of termites from termite colony 3
21229
21151
-
Pro
TGG
[ENA]
¢þ
>WENV170716372
LSQA01000003
[LSQA] termite gut metagenome; viral DNA filtered from gut of termites from termite colony 3
21493
21418
-
Gln
CTG
[ENA]
¢þ
>WENV170716371
LSQA01000003
[LSQA] termite gut metagenome; viral DNA filtered from gut of termites from termite colony 3
21583
21497
-
Gln
TTG
[ENA]
¢þ
>WENV170716386
LSQA01000021
[LSQA] termite gut metagenome; viral DNA filtered from gut of termites from termite colony 3
23236
23160
-
Thr
TGT
[ENA]
¢þ
>WENV170716385
LSQA01000021
[LSQA] termite gut metagenome; viral DNA filtered from gut of termites from termite colony 3
23999
23924
-
Lys
TTT
[ENA]
¢þ
>WENV170716384
LSQA01000021
[LSQA] termite gut metagenome; viral DNA filtered from gut of termites from termite colony 3
24758
24683
-
Ala
TGC
[ENA]
¢þ
>WENV170716405
LSQA01000036
[LSQA] termite gut metagenome; viral DNA filtered from gut of termites from termite colony 3
24798
24725
-
Leu
TAG
[ENA]
¢þ
>WENV170716383
LSQA01000021
[LSQA] termite gut metagenome; viral DNA filtered from gut of termites from termite colony 3
24839
24764
-
Pro
TGG
[ENA]
¢þ
>WENV170716404
LSQA01000036
[LSQA] termite gut metagenome; viral DNA filtered from gut of termites from termite colony 3
24883
24799
-
Leu
TAA
[ENA]
¢þ
>WENV170716382
LSQA01000021
[LSQA] termite gut metagenome; viral DNA filtered from gut of termites from termite colony 3
24987
24913
-
Gly
TCC
[ENA]
¢þ
>WENV170716381
LSQA01000021
[LSQA] termite gut metagenome; viral DNA filtered from gut of termites from termite colony 3
25204
25129
-
Trp
CCA
[ENA]
¢þ
>WENV170716403
LSQA01000036
[LSQA] termite gut metagenome; viral DNA filtered from gut of termites from termite colony 3
25272
25200
-
Asp
GTC
[ENA]
¢þ
>WENV170716402
LSQA01000036
[LSQA] termite gut metagenome; viral DNA filtered from gut of termites from termite colony 3
25535
25462
-
Asn
GTT
[ENA]
¢þ
>WENV170716401
LSQA01000036
[LSQA] termite gut metagenome; viral DNA filtered from gut of termites from termite colony 3
25649
25575
-
Thr
TGT
[ENA]
¢þ
>WENV170716380
LSQA01000021
[LSQA] termite gut metagenome; viral DNA filtered from gut of termites from termite colony 3
25691
25615
-
Asp
GTC
[ENA]
¢þ
>WENV170716400
LSQA01000036
[LSQA] termite gut metagenome; viral DNA filtered from gut of termites from termite colony 3
25776
25691
-
Ser
GCT
[ENA]
¢þ
>WENV170716379
LSQA01000021
[LSQA] termite gut metagenome; viral DNA filtered from gut of termites from termite colony 3
26218
26143
-
Val
TAC
[ENA]
¢þ
>WENV170716370
LSQA01000003
[LSQA] termite gut metagenome; viral DNA filtered from gut of termites from termite colony 3
26309
26232
-
Arg
TCT
[ENA]
¢þ
>WENV170716369
LSQA01000003
[LSQA] termite gut metagenome; viral DNA filtered from gut of termites from termite colony 3
26466
26394
-
Met
CAT
[ENA]
¢þ
>WENV170716378
LSQA01000021
[LSQA] termite gut metagenome; viral DNA filtered from gut of termites from termite colony 3
26670
26599
-
Ser
ACT
[ENA]
¢þ
>WENV170716377
LSQA01000021
[LSQA] termite gut metagenome; viral DNA filtered from gut of termites from termite colony 3
29234
29159
-
Asn
GTT
[ENA]
¢þ
>WENV170716368
LSQA01000002
[LSQA] termite gut metagenome; viral DNA filtered from gut of termites from termite colony 3
45725
45813
+
Sup
CTA
[ENA]
¢þ
>WENV170716360
LSQA01000001
[LSQA] termite gut metagenome; viral DNA filtered from gut of termites from termite colony 3
58834
58905
+
Gln
TTG
[ENA]
¢þ
>WENV170716375
LSQA01000004
[LSQA] termite gut metagenome; viral DNA filtered from gut of termites from termite colony 3
66598
66673
+
Pro
TGG
[ENA]
¢þ
>WENV170716364
LSQA01000001
[LSQA] termite gut metagenome; viral DNA filtered from gut of termites from termite colony 3
213871
213800
-
Arg
TCT
[ENA]
¢þ
>WENV170716363
LSQA01000001
[LSQA] termite gut metagenome; viral DNA filtered from gut of termites from termite colony 3
230673
230580
-
Ser
TGA
[ENA]
¢þ
>WENV170716362
LSQA01000001
[LSQA] termite gut metagenome; viral DNA filtered from gut of termites from termite colony 3
230836
230763
-
Glu
TTC
[ENA]
¢þ
>WENV170716361
LSQA01000001
[LSQA] termite gut metagenome; viral DNA filtered from gut of termites from termite colony 3
245762
245834
+
Pro
TGG
[ENA]
¢þ
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
View ClustalW result
BACK