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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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HOW TO USE
tRNA gene List
[ODEY] human metagenome; G_DNA_Buccal mucosa
HIT:
62 sequence(s).
Download Sequence
View ClustalW result
The reliable tRNA genes
All candidate tRNA genes
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
>WENV180707030
ODEY01006125
[ODEY] human metagenome; G_DNA_Buccal mucosa
31
104
+
Val
CAC
[ENA]
¢þ
>WENV180707040
ODEY01009834
[ODEY] human metagenome; G_DNA_Buccal mucosa
33
106
+
Gln
TTG
[ENA]
¢þ
>WENV180707022
ODEY01002415
[ODEY] human metagenome; G_DNA_Buccal mucosa
36
108
+
Val
GAC
[ENA]
¢þ
>WENV180707032
ODEY01006723
[ODEY] human metagenome; G_DNA_Buccal mucosa
43
117
+
Glu
TTC
[ENA]
¢þ
>WENV180707007
ODEY01001199
[ODEY] human metagenome; G_DNA_Buccal mucosa
75
157
+
Tyr
GTA
[ENA]
¢þ
>WENV180707017
ODEY01001582
[ODEY] human metagenome; G_DNA_Buccal mucosa
81
7
-
Val
TAC
[ENA]
¢þ
>WENV180707037
ODEY01008646
[ODEY] human metagenome; G_DNA_Buccal mucosa
92
167
+
Thr
CGT
[ENA]
¢þ
>WENV180707039
ODEY01009597
[ODEY] human metagenome; G_DNA_Buccal mucosa
101
25
-
fMet
CAT
[ENA]
¢þ
>WENV180707025
ODEY01002634
[ODEY] human metagenome; G_DNA_Buccal mucosa
101
28
-
Arg
ACG
[ENA]
¢þ
>WENV180707036
ODEY01008183
[ODEY] human metagenome; G_DNA_Buccal mucosa
110
34
-
Arg
ACG
[ENA]
¢þ
>WENV180707041
ODEY01009834
[ODEY] human metagenome; G_DNA_Buccal mucosa
118
190
+
Cys
GCA
[ENA]
¢þ
>WENV180707003
ODEY01000726
[ODEY] human metagenome; G_DNA_Buccal mucosa
120
45
-
Glu
TTC
[ENA]
¢þ
>WENV180707033
ODEY01006723
[ODEY] human metagenome; G_DNA_Buccal mucosa
122
197
+
Val
TAC
[ENA]
¢þ
>WENV180707012
ODEY01001346
[ODEY] human metagenome; G_DNA_Buccal mucosa
129
58
-
Cys
GCA
[ENA]
¢þ
>WENV180706980
ODEY01000023
[ODEY] human metagenome; G_DNA_Buccal mucosa
135
207
+
Asn
GTT
[ENA]
¢þ
>WENV180707034
ODEY01007775
[ODEY] human metagenome; G_DNA_Buccal mucosa
138
64
-
Pro
GGG
[ENA]
¢þ
>WENV180707038
ODEY01008728
[ODEY] human metagenome; G_DNA_Buccal mucosa
146
73
-
Gly
TCC
[ENA]
¢þ
>WENV180707019
ODEY01001721
[ODEY] human metagenome; G_DNA_Buccal mucosa
173
247
+
Ala
TGC
[ENA]
¢þ
>WENV180707024
ODEY01002602
[ODEY] human metagenome; G_DNA_Buccal mucosa
178
253
+
Thr
TGT
[ENA]
¢þ
>WENV180707031
ODEY01006503
[ODEY] human metagenome; G_DNA_Buccal mucosa
180
88
-
Ser
TGA
[ENA]
¢þ
>WENV180706995
ODEY01000429
[ODEY] human metagenome; G_DNA_Buccal mucosa
196
122
-
Ala
TGC
[ENA]
¢þ
>WENV180707035
ODEY01008183
[ODEY] human metagenome; G_DNA_Buccal mucosa
211
123
-
Leu
TAA
[ENA]
¢þ
>WENV180707005
ODEY01001032
[ODEY] human metagenome; G_DNA_Buccal mucosa
217
290
+
Trp
CCA
[ENA]
¢þ
>WENV180707029
ODEY01003947
[ODEY] human metagenome; G_DNA_Buccal mucosa
226
142
-
Leu
TAG
[ENA]
¢þ
>WENV180707011
ODEY01001346
[ODEY] human metagenome; G_DNA_Buccal mucosa
230
157
-
Gly
GCC
[ENA]
¢þ
>WENV180707027
ODEY01003389
[ODEY] human metagenome; G_DNA_Buccal mucosa
231
303
+
Thr
GGT
[ENA]
¢þ
>WENV180707028
ODEY01003907
[ODEY] human metagenome; G_DNA_Buccal mucosa
234
310
+
Ile2
CAT
[ENA]
¢þ
>WENV180707014
ODEY01001403
[ODEY] human metagenome; G_DNA_Buccal mucosa
244
169
-
Glu
CTC
[ENA]
¢þ
>WENV180707015
ODEY01001408
[ODEY] human metagenome; G_DNA_Buccal mucosa
263
346
+
Leu
CAG
[ENA]
¢þ
>WENV180707002
ODEY01000726
[ODEY] human metagenome; G_DNA_Buccal mucosa
274
199
-
Ala
GGC
[ENA]
¢þ
>WENV180707023
ODEY01002487
[ODEY] human metagenome; G_DNA_Buccal mucosa
279
364
+
Ser
TGA
[ENA]
¢þ
>WENV180707026
ODEY01002917
[ODEY] human metagenome; G_DNA_Buccal mucosa
296
370
+
Lys
CTT
[ENA]
¢þ
>WENV180707001
ODEY01000693
[ODEY] human metagenome; G_DNA_Buccal mucosa
315
239
-
Pro
CGG
[ENA]
¢þ
>WENV180707021
ODEY01001853
[ODEY] human metagenome; G_DNA_Buccal mucosa
334
249
-
Ser
TGA
[ENA]
¢þ
>WENV180707008
ODEY01001199
[ODEY] human metagenome; G_DNA_Buccal mucosa
358
431
+
Thr
GGT
[ENA]
¢þ
>WENV180707010
ODEY01001268
[ODEY] human metagenome; G_DNA_Buccal mucosa
366
441
+
Trp
CCA
[ENA]
¢þ
>WENV180706985
ODEY01000061
[ODEY] human metagenome; G_DNA_Buccal mucosa
381
311
-
Met
CAT
[ENA]
¢þ
>WENV180706990
ODEY01000316
[ODEY] human metagenome; G_DNA_Buccal mucosa
384
458
+
Asp
GTC
[ENA]
¢þ
>WENV180707020
ODEY01001853
[ODEY] human metagenome; G_DNA_Buccal mucosa
440
358
-
Tyr
GTA
[ENA]
¢þ
>WENV180707013
ODEY01001403
[ODEY] human metagenome; G_DNA_Buccal mucosa
452
380
-
Gln
CTG
[ENA]
¢þ
>WENV180707004
ODEY01001011
[ODEY] human metagenome; G_DNA_Buccal mucosa
469
393
-
fMet
CAT
[ENA]
¢þ
>WENV180707006
ODEY01001097
[ODEY] human metagenome; G_DNA_Buccal mucosa
484
557
+
Asn
GTT
[ENA]
¢þ
>WENV180707018
ODEY01001663
[ODEY] human metagenome; G_DNA_Buccal mucosa
492
407
-
Ser
GGA
[ENA]
¢þ
>WENV180707009
ODEY01001199
[ODEY] human metagenome; G_DNA_Buccal mucosa
496
570
+
Met
CAT
[ENA]
¢þ
>WENV180706991
ODEY01000316
[ODEY] human metagenome; G_DNA_Buccal mucosa
519
594
+
Phe
GAA
[ENA]
¢þ
>WENV180706993
ODEY01000353
[ODEY] human metagenome; G_DNA_Buccal mucosa
529
604
+
Lys
TTT
[ENA]
¢þ
>WENV180707016
ODEY01001520
[ODEY] human metagenome; G_DNA_Buccal mucosa
545
470
-
Asn
GTT
[ENA]
¢þ
>WENV180706983
ODEY01000059
[ODEY] human metagenome; G_DNA_Buccal mucosa
548
618
+
Val
TAC
[ENA]
¢þ
>WENV180707000
ODEY01000587
[ODEY] human metagenome; G_DNA_Buccal mucosa
555
481
-
Lys
TTT
[ENA]
¢þ
>WENV180706998
ODEY01000538
[ODEY] human metagenome; G_DNA_Buccal mucosa
632
715
+
Leu
TAG
[ENA]
¢þ
>WENV180706997
ODEY01000494
[ODEY] human metagenome; G_DNA_Buccal mucosa
709
782
+
Ala
GGC
[ENA]
¢þ
>WENV180706999
ODEY01000553
[ODEY] human metagenome; G_DNA_Buccal mucosa
815
890
+
His
GTG
[ENA]
¢þ
>WENV180706988
ODEY01000151
[ODEY] human metagenome; G_DNA_Buccal mucosa
941
1016
+
Arg
TCT
[ENA]
¢þ
>WENV180706996
ODEY01000482
[ODEY] human metagenome; G_DNA_Buccal mucosa
1069
996
-
Arg
CCT
[ENA]
¢þ
>WENV180706994
ODEY01000353
[ODEY] human metagenome; G_DNA_Buccal mucosa
1209
1136
-
Thr
TGT
[ENA]
¢þ
>WENV180706992
ODEY01000318
[ODEY] human metagenome; G_DNA_Buccal mucosa
1263
1188
-
Ala
TGC
[ENA]
¢þ
>WENV180706989
ODEY01000219
[ODEY] human metagenome; G_DNA_Buccal mucosa
1359
1284
-
Thr
CGT
[ENA]
¢þ
>WENV180706984
ODEY01000061
[ODEY] human metagenome; G_DNA_Buccal mucosa
1607
1680
+
His
GTG
[ENA]
¢þ
>WENV180706981
ODEY01000038
[ODEY] human metagenome; G_DNA_Buccal mucosa
1632
1716
+
Leu
TAG
[ENA]
¢þ
>WENV180706987
ODEY01000143
[ODEY] human metagenome; G_DNA_Buccal mucosa
1643
1570
-
Gly
TCC
[ENA]
¢þ
>WENV180706986
ODEY01000063
[ODEY] human metagenome; G_DNA_Buccal mucosa
1966
2053
+
Ser
CGA
[ENA]
¢þ
>WENV180706982
ODEY01000038
[ODEY] human metagenome; G_DNA_Buccal mucosa
2093
2168
+
Arg
TCG
[ENA]
¢þ
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
View ClustalW result
BACK