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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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|
Keyword
|
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|
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HOW TO USE
tRNA gene List
[ODFP] human metagenome; G_DNA_Anterior nares
HIT:
109 sequence(s).
Download Sequence
View ClustalW result
The reliable tRNA genes
All candidate tRNA genes
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
>WENV180711584
ODFP01005350
[ODFP] human metagenome; G_DNA_Anterior nares
6
78
+
Thr
TGT
[ENA]
¢þ
>WENV180711558
ODFP01001237
[ODFP] human metagenome; G_DNA_Anterior nares
20
94
+
Leu
CAA
[ENA]
¢þ
>WENV180711605
ODFP01011645
[ODFP] human metagenome; G_DNA_Anterior nares
34
108
+
Ile
GAT
[ENA]
¢þ
>WENV180711509
ODFP01000005
[ODFP] human metagenome; G_DNA_Anterior nares
66
142
+
Val
TAC
[ENA]
¢þ
>WENV180711588
ODFP01005416
[ODFP] human metagenome; G_DNA_Anterior nares
69
142
+
Asn
GTT
[ENA]
¢þ
>WENV180711614
ODFP01015991
[ODFP] human metagenome; G_DNA_Anterior nares
77
3
-
Asn
GTT
[ENA]
¢þ
>WENV180711615
ODFP01018020
[ODFP] human metagenome; G_DNA_Anterior nares
79
6
-
Ala
TGC
[ENA]
¢þ
>WENV180711598
ODFP01009707
[ODFP] human metagenome; G_DNA_Anterior nares
85
11
-
Leu
TAA
[ENA]
¢þ
>WENV180711603
ODFP01010620
[ODFP] human metagenome; G_DNA_Anterior nares
92
164
+
Gln
CTG
[ENA]
¢þ
>WENV180711585
ODFP01005350
[ODFP] human metagenome; G_DNA_Anterior nares
94
165
+
Gly
GCC
[ENA]
¢þ
>WENV180711589
ODFP01005992
[ODFP] human metagenome; G_DNA_Anterior nares
94
184
+
Ser
GCT
[ENA]
¢þ
>WENV180711591
ODFP01006239
[ODFP] human metagenome; G_DNA_Anterior nares
96
167
+
Gln
TTG
[ENA]
¢þ
>WENV180711565
ODFP01002460
[ODFP] human metagenome; G_DNA_Anterior nares
100
173
+
Gly
CCC
[ENA]
¢þ
>WENV180711595
ODFP01008465
[ODFP] human metagenome; G_DNA_Anterior nares
101
28
-
Glu
CTC
[ENA]
¢þ
>WENV180711593
ODFP01007691
[ODFP] human metagenome; G_DNA_Anterior nares
104
178
+
Ile2
CAT
[ENA]
¢þ
>WENV180711610
ODFP01013138
[ODFP] human metagenome; G_DNA_Anterior nares
105
32
-
Lys
TTT
[ENA]
¢þ
>WENV180711609
ODFP01012977
[ODFP] human metagenome; G_DNA_Anterior nares
109
21
-
Ser
CGA
[ENA]
¢þ
>WENV180711548
ODFP01000558
[ODFP] human metagenome; G_DNA_Anterior nares
109
33
-
Ile
GAT
[ENA]
¢þ
>WENV180711577
ODFP01003932
[ODFP] human metagenome; G_DNA_Anterior nares
109
36
-
Gly
GCC
[ENA]
¢þ
>WENV180711525
ODFP01000123
[ODFP] human metagenome; G_DNA_Anterior nares
109
182
+
Pro
TGG
[ENA]
¢þ
>WENV180711612
ODFP01013391
[ODFP] human metagenome; G_DNA_Anterior nares
116
29
-
Ser
TGA
[ENA]
¢þ
>WENV180711566
ODFP01002524
[ODFP] human metagenome; G_DNA_Anterior nares
116
41
-
Arg
TCT
[ENA]
¢þ
>WENV180711611
ODFP01013200
[ODFP] human metagenome; G_DNA_Anterior nares
118
36
-
Val
TAC
[ENA]
¢þ
>WENV180711608
ODFP01012361
[ODFP] human metagenome; G_DNA_Anterior nares
119
193
+
Ala
TGC
[ENA]
¢þ
>WENV180711581
ODFP01004336
[ODFP] human metagenome; G_DNA_Anterior nares
134
59
-
Val
TAC
[ENA]
¢þ
>WENV180711613
ODFP01015086
[ODFP] human metagenome; G_DNA_Anterior nares
138
57
-
Leu
TAG
[ENA]
¢þ
>WENV180711604
ODFP01011012
[ODFP] human metagenome; G_DNA_Anterior nares
146
72
-
Ala
TGC
[ENA]
¢þ
>WENV180711597
ODFP01009427
[ODFP] human metagenome; G_DNA_Anterior nares
146
219
+
Ala
CGC
[ENA]
¢þ
>WENV180711510
ODFP01000005
[ODFP] human metagenome; G_DNA_Anterior nares
149
221
+
Lys
TTT
[ENA]
¢þ
>WENV180711606
ODFP01011795
[ODFP] human metagenome; G_DNA_Anterior nares
157
231
+
Arg
CCG
[ENA]
¢þ
>WENV180711601
ODFP01010402
[ODFP] human metagenome; G_DNA_Anterior nares
158
75
-
Leu
TAG
[ENA]
¢þ
>WENV180711607
ODFP01011878
[ODFP] human metagenome; G_DNA_Anterior nares
159
69
-
Ser
GCT
[ENA]
¢þ
>WENV180711599
ODFP01010044
[ODFP] human metagenome; G_DNA_Anterior nares
159
85
-
Arg
CCG
[ENA]
¢þ
>WENV180711580
ODFP01004332
[ODFP] human metagenome; G_DNA_Anterior nares
178
253
+
Arg
TCG
[ENA]
¢þ
>WENV180711518
ODFP01000041
[ODFP] human metagenome; G_DNA_Anterior nares
178
266
+
Ser
GGA
[ENA]
¢þ
>WENV180711602
ODFP01010427
[ODFP] human metagenome; G_DNA_Anterior nares
179
104
-
Lys
TTT
[ENA]
¢þ
>WENV180711582
ODFP01005165
[ODFP] human metagenome; G_DNA_Anterior nares
180
256
+
Pro
TGG
[ENA]
¢þ
>WENV180711555
ODFP01000869
[ODFP] human metagenome; G_DNA_Anterior nares
187
114
-
Lys
CTT
[ENA]
¢þ
>WENV180711575
ODFP01003732
[ODFP] human metagenome; G_DNA_Anterior nares
190
117
-
Phe
GAA
[ENA]
¢þ
>WENV180711596
ODFP01008773
[ODFP] human metagenome; G_DNA_Anterior nares
194
122
-
Val
CAC
[ENA]
¢þ
>WENV180711586
ODFP01005350
[ODFP] human metagenome; G_DNA_Anterior nares
194
280
+
Leu
TAA
[ENA]
¢þ
>WENV180711526
ODFP01000123
[ODFP] human metagenome; G_DNA_Anterior nares
201
276
+
Met
CAT
[ENA]
¢þ
>WENV180711594
ODFP01008465
[ODFP] human metagenome; G_DNA_Anterior nares
211
139
-
Gln
CTG
[ENA]
¢þ
>WENV180711600
ODFP01010133
[ODFP] human metagenome; G_DNA_Anterior nares
233
151
-
Tyr
GTA
[ENA]
¢þ
>WENV180711583
ODFP01005292
[ODFP] human metagenome; G_DNA_Anterior nares
238
162
-
Pro
CGG
[ENA]
¢þ
>WENV180711592
ODFP01007688
[ODFP] human metagenome; G_DNA_Anterior nares
244
173
-
Gly
TCC
[ENA]
¢þ
>WENV180711511
ODFP01000005
[ODFP] human metagenome; G_DNA_Anterior nares
245
319
+
Arg
TCG
[ENA]
¢þ
>WENV180711563
ODFP01001964
[ODFP] human metagenome; G_DNA_Anterior nares
247
161
-
Leu
GAG
[ENA]
¢þ
>WENV180711590
ODFP01006170
[ODFP] human metagenome; G_DNA_Anterior nares
252
179
-
Thr
TGT
[ENA]
¢þ
>WENV180711578
ODFP01004150
[ODFP] human metagenome; G_DNA_Anterior nares
254
327
+
Thr
GGT
[ENA]
¢þ
>WENV180711574
ODFP01003732
[ODFP] human metagenome; G_DNA_Anterior nares
283
209
-
Asp
GTC
[ENA]
¢þ
>WENV180711579
ODFP01004165
[ODFP] human metagenome; G_DNA_Anterior nares
286
362
+
fMet
CAT
[ENA]
¢þ
>WENV180711559
ODFP01001259
[ODFP] human metagenome; G_DNA_Anterior nares
287
198
-
Ser
GCT
[ENA]
¢þ
>WENV180711587
ODFP01005350
[ODFP] human metagenome; G_DNA_Anterior nares
289
364
+
Arg
ACG
[ENA]
¢þ
>WENV180711527
ODFP01000123
[ODFP] human metagenome; G_DNA_Anterior nares
294
367
+
Ile2
CAT
[ENA]
¢þ
>WENV180711562
ODFP01001848
[ODFP] human metagenome; G_DNA_Anterior nares
295
220
-
Thr
CGT
[ENA]
¢þ
>WENV180711569
ODFP01002763
[ODFP] human metagenome; G_DNA_Anterior nares
300
373
+
Gly
CCC
[ENA]
¢þ
>WENV180711567
ODFP01002575
[ODFP] human metagenome; G_DNA_Anterior nares
315
241
-
Val
CAC
[ENA]
¢þ
>WENV180711564
ODFP01002253
[ODFP] human metagenome; G_DNA_Anterior nares
317
244
-
Ala
GGC
[ENA]
¢þ
>WENV180711571
ODFP01003188
[ODFP] human metagenome; G_DNA_Anterior nares
317
392
+
Trp
CCA
[ENA]
¢þ
>WENV180711568
ODFP01002600
[ODFP] human metagenome; G_DNA_Anterior nares
324
249
-
His
GTG
[ENA]
¢þ
>WENV180711560
ODFP01001669
[ODFP] human metagenome; G_DNA_Anterior nares
349
275
-
Pro
TGG
[ENA]
¢þ
>WENV180711550
ODFP01000627
[ODFP] human metagenome; G_DNA_Anterior nares
349
424
+
Thr
GGT
[ENA]
¢þ
>WENV180711572
ODFP01003697
[ODFP] human metagenome; G_DNA_Anterior nares
362
444
+
Leu
TAG
[ENA]
¢þ
>WENV180711570
ODFP01002884
[ODFP] human metagenome; G_DNA_Anterior nares
368
286
-
Leu
TAG
[ENA]
¢þ
>WENV180711556
ODFP01001022
[ODFP] human metagenome; G_DNA_Anterior nares
376
461
+
Leu
CAG
[ENA]
¢þ
>WENV180711573
ODFP01003732
[ODFP] human metagenome; G_DNA_Anterior nares
387
314
-
Glu
TTC
[ENA]
¢þ
>WENV180711576
ODFP01003759
[ODFP] human metagenome; G_DNA_Anterior nares
389
316
-
Arg
TCT
[ENA]
¢þ
>WENV180711528
ODFP01000123
[ODFP] human metagenome; G_DNA_Anterior nares
420
490
+
Gly
TCC
[ENA]
¢þ
>WENV180711551
ODFP01000627
[ODFP] human metagenome; G_DNA_Anterior nares
473
546
+
Met
CAT
[ENA]
¢þ
>WENV180711529
ODFP01000123
[ODFP] human metagenome; G_DNA_Anterior nares
501
574
+
Ile
GAT
[ENA]
¢þ
>WENV180711561
ODFP01001755
[ODFP] human metagenome; G_DNA_Anterior nares
523
605
+
Tyr
GTA
[ENA]
¢þ
>WENV180711549
ODFP01000575
[ODFP] human metagenome; G_DNA_Anterior nares
580
506
-
Leu
CAA
[ENA]
¢þ
>WENV180711530
ODFP01000123
[ODFP] human metagenome; G_DNA_Anterior nares
591
662
+
Glu
TTC
[ENA]
¢þ
>WENV180711531
ODFP01000123
[ODFP] human metagenome; G_DNA_Anterior nares
675
764
+
Ser
TGA
[ENA]
¢þ
>WENV180711552
ODFP01000627
[ODFP] human metagenome; G_DNA_Anterior nares
682
755
+
Trp
CCA
[ENA]
¢þ
>WENV180711547
ODFP01000557
[ODFP] human metagenome; G_DNA_Anterior nares
693
766
+
Ala
GGC
[ENA]
¢þ
>WENV180711557
ODFP01001100
[ODFP] human metagenome; G_DNA_Anterior nares
750
675
-
Thr
CGT
[ENA]
¢þ
>WENV180711546
ODFP01000431
[ODFP] human metagenome; G_DNA_Anterior nares
782
708
-
Gly
TCC
[ENA]
¢þ
>WENV180711545
ODFP01000401
[ODFP] human metagenome; G_DNA_Anterior nares
824
752
-
Gln
TTG
[ENA]
¢þ
>WENV180711532
ODFP01000123
[ODFP] human metagenome; G_DNA_Anterior nares
867
942
+
Asp
GTC
[ENA]
¢þ
>WENV180711554
ODFP01000722
[ODFP] human metagenome; G_DNA_Anterior nares
877
802
-
His
GTG
[ENA]
¢þ
>WENV180711519
ODFP01000043
[ODFP] human metagenome; G_DNA_Anterior nares
904
977
+
Arg
ACG
[ENA]
¢þ
>WENV180711553
ODFP01000651
[ODFP] human metagenome; G_DNA_Anterior nares
910
822
-
Ser
GGA
[ENA]
¢þ
>WENV180711544
ODFP01000334
[ODFP] human metagenome; G_DNA_Anterior nares
946
872
-
Pro
CGG
[ENA]
¢þ
>WENV180711533
ODFP01000123
[ODFP] human metagenome; G_DNA_Anterior nares
948
1022
+
Phe
GAA
[ENA]
¢þ
>WENV180711543
ODFP01000276
[ODFP] human metagenome; G_DNA_Anterior nares
989
1077
+
Ser
GCT
[ENA]
¢þ
>WENV180711541
ODFP01000154
[ODFP] human metagenome; G_DNA_Anterior nares
990
1064
+
Pro
TGG
[ENA]
¢þ
>WENV180711534
ODFP01000123
[ODFP] human metagenome; G_DNA_Anterior nares
1039
1121
+
Tyr
GTA
[ENA]
¢þ
>WENV180711520
ODFP01000058
[ODFP] human metagenome; G_DNA_Anterior nares
1044
1118
+
Ile
GAT
[ENA]
¢þ
>WENV180711540
ODFP01000139
[ODFP] human metagenome; G_DNA_Anterior nares
1079
1005
-
Ile2
CAT
[ENA]
¢þ
>WENV180711535
ODFP01000123
[ODFP] human metagenome; G_DNA_Anterior nares
1124
1196
+
Trp
CCA
[ENA]
¢þ
>WENV180711521
ODFP01000058
[ODFP] human metagenome; G_DNA_Anterior nares
1131
1204
+
Ala
TGC
[ENA]
¢þ
>WENV180711536
ODFP01000123
[ODFP] human metagenome; G_DNA_Anterior nares
1206
1280
+
His
GTG
[ENA]
¢þ
>WENV180711542
ODFP01000256
[ODFP] human metagenome; G_DNA_Anterior nares
1217
1141
-
fMet
CAT
[ENA]
¢þ
>WENV180711537
ODFP01000123
[ODFP] human metagenome; G_DNA_Anterior nares
1295
1368
+
Gln
TTG
[ENA]
¢þ
>WENV180711523
ODFP01000066
[ODFP] human metagenome; G_DNA_Anterior nares
1340
1413
+
Asn
GTT
[ENA]
¢þ
>WENV180711538
ODFP01000123
[ODFP] human metagenome; G_DNA_Anterior nares
1380
1452
+
Cys
GCA
[ENA]
¢þ
>WENV180711539
ODFP01000123
[ODFP] human metagenome; G_DNA_Anterior nares
1480
1564
+
Leu
CAA
[ENA]
¢þ
>WENV180711524
ODFP01000102
[ODFP] human metagenome; G_DNA_Anterior nares
1565
1490
-
Arg
CCT
[ENA]
¢þ
>WENV180711522
ODFP01000061
[ODFP] human metagenome; G_DNA_Anterior nares
2131
2046
-
Ser
TGA
[ENA]
¢þ
>WENV180711517
ODFP01000021
[ODFP] human metagenome; G_DNA_Anterior nares
27206
27290
+
Leu
GAG
[ENA]
¢þ
>WENV180711507
ODFP01000001
[ODFP] human metagenome; G_DNA_Anterior nares
27510
27598
+
Ser
GGA
[ENA]
¢þ
>WENV180711516
ODFP01000005
[ODFP] human metagenome; G_DNA_Anterior nares
45823
45726
-
SeC
TCA
[ENA]
¢þ
>WENV180711508
ODFP01000001
[ODFP] human metagenome; G_DNA_Anterior nares
89358
89284
-
Arg
TCT
[ENA]
¢þ
>WENV180711512
ODFP01000005
[ODFP] human metagenome; G_DNA_Anterior nares
104361
104432
+
Glu
TTC
[ENA]
¢þ
>WENV180711513
ODFP01000005
[ODFP] human metagenome; G_DNA_Anterior nares
104437
104520
+
Tyr
GTA
[ENA]
¢þ
>WENV180711514
ODFP01000005
[ODFP] human metagenome; G_DNA_Anterior nares
104524
104597
+
Gln
TTG
[ENA]
¢þ
>WENV180711515
ODFP01000005
[ODFP] human metagenome; G_DNA_Anterior nares
109943
110016
+
Thr
GGT
[ENA]
¢þ
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
View ClustalW result
BACK