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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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|
Keyword
|
BLAST
|
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HOW TO USE
tRNA gene List
[ODHR] human metagenome; G_DNA_Anterior nares
HIT:
83 sequence(s).
Download Sequence
View ClustalW result
The reliable tRNA genes
All candidate tRNA genes
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
>WENV180749731
ODHR01003751
[ODHR] human metagenome; G_DNA_Anterior nares
49
123
+
Pro
TGG
[ENA]
¢þ
>WENV180749730
ODHR01003541
[ODHR] human metagenome; G_DNA_Anterior nares
73
-1
-
Arg
CCG
[ENA]
¢þ
>WENV180749722
ODHR01002168
[ODHR] human metagenome; G_DNA_Anterior nares
88
15
-
Ala
CGC
[ENA]
¢þ
>WENV180749729
ODHR01003395
[ODHR] human metagenome; G_DNA_Anterior nares
100
25
-
Asp
GTC
[ENA]
¢þ
>WENV180749733
ODHR01003874
[ODHR] human metagenome; G_DNA_Anterior nares
114
189
+
Trp
CCA
[ENA]
¢þ
>WENV180749719
ODHR01001755
[ODHR] human metagenome; G_DNA_Anterior nares
133
57
-
Ile
GAT
[ENA]
¢þ
>WENV180749705
ODHR01001079
[ODHR] human metagenome; G_DNA_Anterior nares
134
61
-
Ala
GGC
[ENA]
¢þ
>WENV180749732
ODHR01003751
[ODHR] human metagenome; G_DNA_Anterior nares
137
212
+
Ala
TGC
[ENA]
¢þ
>WENV180749727
ODHR01002629
[ODHR] human metagenome; G_DNA_Anterior nares
140
66
-
Lys
TTT
[ENA]
¢þ
>WENV180749691
ODHR01000584
[ODHR] human metagenome; G_DNA_Anterior nares
144
60
-
Leu
CAG
[ENA]
¢þ
>WENV180749735
ODHR01003907
[ODHR] human metagenome; G_DNA_Anterior nares
144
73
-
Gln
TTG
[ENA]
¢þ
>WENV180749698
ODHR01000718
[ODHR] human metagenome; G_DNA_Anterior nares
151
239
+
Ser
TGA
[ENA]
¢þ
>WENV180749715
ODHR01001339
[ODHR] human metagenome; G_DNA_Anterior nares
183
258
+
Thr
CGT
[ENA]
¢þ
>WENV180749699
ODHR01000722
[ODHR] human metagenome; G_DNA_Anterior nares
186
259
+
Arg
ACG
[ENA]
¢þ
>WENV180749714
ODHR01001306
[ODHR] human metagenome; G_DNA_Anterior nares
188
262
+
Leu
TAA
[ENA]
¢þ
>WENV180749696
ODHR01000666
[ODHR] human metagenome; G_DNA_Anterior nares
190
262
+
Gln
CTG
[ENA]
¢þ
>WENV180749728
ODHR01003395
[ODHR] human metagenome; G_DNA_Anterior nares
198
107
-
Ser
TGA
[ENA]
¢þ
>WENV180749713
ODHR01001192
[ODHR] human metagenome; G_DNA_Anterior nares
201
128
-
Ala
CGC
[ENA]
¢þ
>WENV180749704
ODHR01001051
[ODHR] human metagenome; G_DNA_Anterior nares
204
130
-
fMet
CAT
[ENA]
¢þ
>WENV180749679
ODHR01000295
[ODHR] human metagenome; G_DNA_Anterior nares
206
279
+
Asn
GTT
[ENA]
¢þ
>WENV180749703
ODHR01001030
[ODHR] human metagenome; G_DNA_Anterior nares
212
286
+
Leu
CAA
[ENA]
¢þ
>WENV180749726
ODHR01002629
[ODHR] human metagenome; G_DNA_Anterior nares
221
146
-
Thr
TGT
[ENA]
¢þ
>WENV180749734
ODHR01003907
[ODHR] human metagenome; G_DNA_Anterior nares
228
155
-
His
GTG
[ENA]
¢þ
>WENV180749701
ODHR01000909
[ODHR] human metagenome; G_DNA_Anterior nares
238
313
+
His
GTG
[ENA]
¢þ
>WENV180749702
ODHR01000977
[ODHR] human metagenome; G_DNA_Anterior nares
246
319
+
Arg
CCT
[ENA]
¢þ
>WENV180749687
ODHR01000440
[ODHR] human metagenome; G_DNA_Anterior nares
254
328
+
Leu
TAA
[ENA]
¢þ
>WENV180749688
ODHR01000505
[ODHR] human metagenome; G_DNA_Anterior nares
290
379
+
Ser
CGA
[ENA]
¢þ
>WENV180749725
ODHR01002629
[ODHR] human metagenome; G_DNA_Anterior nares
303
228
-
Val
TAC
[ENA]
¢þ
>WENV180749724
ODHR01002455
[ODHR] human metagenome; G_DNA_Anterior nares
313
231
-
Tyr
GTA
[ENA]
¢þ
>WENV180749697
ODHR01000666
[ODHR] human metagenome; G_DNA_Anterior nares
368
443
+
Glu
CTC
[ENA]
¢þ
>WENV180749692
ODHR01000607
[ODHR] human metagenome; G_DNA_Anterior nares
424
509
+
Ser
TGA
[ENA]
¢þ
>WENV180749723
ODHR01002258
[ODHR] human metagenome; G_DNA_Anterior nares
462
388
-
Met
CAT
[ENA]
¢þ
>WENV180749683
ODHR01000402
[ODHR] human metagenome; G_DNA_Anterior nares
493
568
+
Pro
TGG
[ENA]
¢þ
>WENV180749718
ODHR01001627
[ODHR] human metagenome; G_DNA_Anterior nares
550
637
+
Leu
GAG
[ENA]
¢þ
>WENV180749709
ODHR01001091
[ODHR] human metagenome; G_DNA_Anterior nares
564
492
-
Val
CAC
[ENA]
¢þ
>WENV180749721
ODHR01001874
[ODHR] human metagenome; G_DNA_Anterior nares
574
501
-
Asn
GTT
[ENA]
¢þ
>WENV180749720
ODHR01001767
[ODHR] human metagenome; G_DNA_Anterior nares
578
652
+
Lys
TTT
[ENA]
¢þ
>WENV180749717
ODHR01001580
[ODHR] human metagenome; G_DNA_Anterior nares
606
533
-
Arg
TCT
[ENA]
¢þ
>WENV180749716
ODHR01001502
[ODHR] human metagenome; G_DNA_Anterior nares
618
691
+
His
GTG
[ENA]
¢þ
>WENV180749677
ODHR01000284
[ODHR] human metagenome; G_DNA_Anterior nares
618
692
+
Ile
GAT
[ENA]
¢þ
>WENV180749711
ODHR01001176
[ODHR] human metagenome; G_DNA_Anterior nares
694
776
+
Tyr
GTA
[ENA]
¢þ
>WENV180749676
ODHR01000281
[ODHR] human metagenome; G_DNA_Anterior nares
843
767
-
fMet
CAT
[ENA]
¢þ
>WENV180749667
ODHR01000174
[ODHR] human metagenome; G_DNA_Anterior nares
861
779
-
Leu
TAG
[ENA]
¢þ
>WENV180749700
ODHR01000883
[ODHR] human metagenome; G_DNA_Anterior nares
887
815
-
Gln
TTG
[ENA]
¢þ
>WENV180749706
ODHR01001091
[ODHR] human metagenome; G_DNA_Anterior nares
955
1030
+
Gly
GCC
[ENA]
¢þ
>WENV180749712
ODHR01001176
[ODHR] human metagenome; G_DNA_Anterior nares
977
1050
+
Thr
GGT
[ENA]
¢þ
>WENV180749707
ODHR01001091
[ODHR] human metagenome; G_DNA_Anterior nares
1047
1118
+
Cys
GCA
[ENA]
¢þ
>WENV180749690
ODHR01000539
[ODHR] human metagenome; G_DNA_Anterior nares
1050
1134
+
Leu
CAA
[ENA]
¢þ
>WENV180749680
ODHR01000381
[ODHR] human metagenome; G_DNA_Anterior nares
1075
1149
+
Glu
TTC
[ENA]
¢þ
>WENV180749708
ODHR01001091
[ODHR] human metagenome; G_DNA_Anterior nares
1136
1210
+
Val
GAC
[ENA]
¢þ
>WENV180749710
ODHR01001116
[ODHR] human metagenome; G_DNA_Anterior nares
1234
1159
-
Arg
CCG
[ENA]
¢þ
>WENV180749689
ODHR01000528
[ODHR] human metagenome; G_DNA_Anterior nares
1275
1364
+
Leu
GAG
[ENA]
¢þ
>WENV180749658
ODHR01000043
[ODHR] human metagenome; G_DNA_Anterior nares
1309
1236
-
Gly
CCC
[ENA]
¢þ
>WENV180749694
ODHR01000661
[ODHR] human metagenome; G_DNA_Anterior nares
1333
1258
-
Ala
TGC
[ENA]
¢þ
>WENV180749693
ODHR01000633
[ODHR] human metagenome; G_DNA_Anterior nares
1523
1450
-
Lys
CTT
[ENA]
¢þ
>WENV180749669
ODHR01000243
[ODHR] human metagenome; G_DNA_Anterior nares
1549
1476
-
Trp
CCA
[ENA]
¢þ
>WENV180749681
ODHR01000381
[ODHR] human metagenome; G_DNA_Anterior nares
1561
1635
+
Asp
GTC
[ENA]
¢þ
>WENV180749656
ODHR01000031
[ODHR] human metagenome; G_DNA_Anterior nares
1610
1536
-
Pro
GGG
[ENA]
¢þ
>WENV180749682
ODHR01000381
[ODHR] human metagenome; G_DNA_Anterior nares
1696
1771
+
Phe
GAA
[ENA]
¢þ
>WENV180749695
ODHR01000664
[ODHR] human metagenome; G_DNA_Anterior nares
1820
1747
-
Lys
TTT
[ENA]
¢þ
>WENV180749666
ODHR01000169
[ODHR] human metagenome; G_DNA_Anterior nares
1877
1949
+
Arg
CCG
[ENA]
¢þ
>WENV180749678
ODHR01000285
[ODHR] human metagenome; G_DNA_Anterior nares
1926
1850
-
Pro
CGG
[ENA]
¢þ
>WENV180749670
ODHR01000258
[ODHR] human metagenome; G_DNA_Anterior nares
1931
1858
-
Gly
TCC
[ENA]
¢þ
>WENV180749674
ODHR01000268
[ODHR] human metagenome; G_DNA_Anterior nares
2173
2101
-
Gly
TCC
[ENA]
¢þ
>WENV180749657
ODHR01000034
[ODHR] human metagenome; G_DNA_Anterior nares
2189
2279
+
Ser
GGA
[ENA]
¢þ
>WENV180749675
ODHR01000275
[ODHR] human metagenome; G_DNA_Anterior nares
2230
2303
+
Gly
CCC
[ENA]
¢þ
>WENV180749659
ODHR01000053
[ODHR] human metagenome; G_DNA_Anterior nares
2244
2317
+
Arg
CCT
[ENA]
¢þ
>WENV180749671
ODHR01000264
[ODHR] human metagenome; G_DNA_Anterior nares
2297
2369
+
Gln
CTG
[ENA]
¢þ
>WENV180749673
ODHR01000268
[ODHR] human metagenome; G_DNA_Anterior nares
2315
2391
+
Pro
TGG
[ENA]
¢þ
>WENV180749685
ODHR01000403
[ODHR] human metagenome; G_DNA_Anterior nares
2316
2241
-
Asp
GTC
[ENA]
¢þ
>WENV180749684
ODHR01000403
[ODHR] human metagenome; G_DNA_Anterior nares
2393
2318
-
Glu
TTC
[ENA]
¢þ
>WENV180749686
ODHR01000405
[ODHR] human metagenome; G_DNA_Anterior nares
2457
2531
+
Val
TAC
[ENA]
¢þ
>WENV180749672
ODHR01000264
[ODHR] human metagenome; G_DNA_Anterior nares
2505
2580
+
Glu
CTC
[ENA]
¢þ
>WENV180749660
ODHR01000075
[ODHR] human metagenome; G_DNA_Anterior nares
2773
2694
-
Gln
TTG
[ENA]
¢þ
>WENV180749668
ODHR01000237
[ODHR] human metagenome; G_DNA_Anterior nares
3214
3301
+
Ser
CGA
[ENA]
¢þ
>WENV180749664
ODHR01000103
[ODHR] human metagenome; G_DNA_Anterior nares
3709
3636
-
Val
CAC
[ENA]
¢þ
>WENV180749665
ODHR01000112
[ODHR] human metagenome; G_DNA_Anterior nares
4018
3943
-
Thr
TGT
[ENA]
¢þ
>WENV180749661
ODHR01000103
[ODHR] human metagenome; G_DNA_Anterior nares
4088
4161
+
Gly
GCC
[ENA]
¢þ
>WENV180749662
ODHR01000103
[ODHR] human metagenome; G_DNA_Anterior nares
4189
4260
+
Cys
GCA
[ENA]
¢þ
>WENV180749663
ODHR01000103
[ODHR] human metagenome; G_DNA_Anterior nares
4261
4333
+
Val
GAC
[ENA]
¢þ
>WENV180749654
ODHR01000011
[ODHR] human metagenome; G_DNA_Anterior nares
5141
5214
+
Ala
GGC
[ENA]
¢þ
>WENV180749653
ODHR01000007
[ODHR] human metagenome; G_DNA_Anterior nares
6020
6103
+
Leu
CAG
[ENA]
¢þ
>WENV180749655
ODHR01000015
[ODHR] human metagenome; G_DNA_Anterior nares
7073
7158
+
Ser
GGA
[ENA]
¢þ
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
View ClustalW result
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