This is the navigation skips to jump to main contents
Jump to main contents.
tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
Top
|
Keyword
|
BLAST
|
Download
|
HOW TO USE
tRNA gene List
[ODJV] human metagenome; G_DNA_Posterior fornix
HIT:
84 sequence(s).
Download Sequence
View ClustalW result
The reliable tRNA genes
All candidate tRNA genes
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
>WENV180822788
ODJV01002928
[ODJV] human metagenome; G_DNA_Posterior fornix
58
130
+
Thr
GGT
[ENA]
¢þ
>WENV180822762
ODJV01000683
[ODJV] human metagenome; G_DNA_Posterior fornix
99
172
+
Ile
GAT
[ENA]
¢þ
>WENV180822791
ODJV01004743
[ODJV] human metagenome; G_DNA_Posterior fornix
100
24
-
Asp
GTC
[ENA]
¢þ
>WENV180822794
ODJV01004955
[ODJV] human metagenome; G_DNA_Posterior fornix
108
35
-
Asn
GTT
[ENA]
¢þ
>WENV180822793
ODJV01004923
[ODJV] human metagenome; G_DNA_Posterior fornix
139
67
-
Gln
CTG
[ENA]
¢þ
>WENV180822780
ODJV01001397
[ODJV] human metagenome; G_DNA_Posterior fornix
145
71
-
Arg
CCT
[ENA]
¢þ
>WENV180822787
ODJV01002847
[ODJV] human metagenome; G_DNA_Posterior fornix
147
62
-
Leu
TAA
[ENA]
¢þ
>WENV180822775
ODJV01000985
[ODJV] human metagenome; G_DNA_Posterior fornix
151
75
-
fMet
CAT
[ENA]
¢þ
>WENV180822737
ODJV01000040
[ODJV] human metagenome; G_DNA_Posterior fornix
154
78
-
Ile
GAT
[ENA]
¢þ
>WENV180822725
ODJV01000004
[ODJV] human metagenome; G_DNA_Posterior fornix
172
263
+
Ser
GGA
[ENA]
¢þ
>WENV180822789
ODJV01004302
[ODJV] human metagenome; G_DNA_Posterior fornix
178
252
+
Glu
CTC
[ENA]
¢þ
>WENV180822790
ODJV01004743
[ODJV] human metagenome; G_DNA_Posterior fornix
179
104
-
fMet
CAT
[ENA]
¢þ
>WENV180822763
ODJV01000683
[ODJV] human metagenome; G_DNA_Posterior fornix
200
274
+
Ala
TGC
[ENA]
¢þ
>WENV180822792
ODJV01004923
[ODJV] human metagenome; G_DNA_Posterior fornix
218
144
-
Glu
CTC
[ENA]
¢þ
>WENV180822786
ODJV01002847
[ODJV] human metagenome; G_DNA_Posterior fornix
282
208
-
Lys
TTT
[ENA]
¢þ
>WENV180822774
ODJV01000985
[ODJV] human metagenome; G_DNA_Posterior fornix
301
209
-
Ser
TGA
[ENA]
¢þ
>WENV180822726
ODJV01000004
[ODJV] human metagenome; G_DNA_Posterior fornix
361
434
+
Glu
TTC
[ENA]
¢þ
>WENV180822764
ODJV01000851
[ODJV] human metagenome; G_DNA_Posterior fornix
406
332
-
Gln
CTG
[ENA]
¢þ
>WENV180822785
ODJV01002847
[ODJV] human metagenome; G_DNA_Posterior fornix
424
350
-
Gln
TTG
[ENA]
¢þ
>WENV180822727
ODJV01000004
[ODJV] human metagenome; G_DNA_Posterior fornix
437
511
+
Val
TAC
[ENA]
¢þ
>WENV180822773
ODJV01000985
[ODJV] human metagenome; G_DNA_Posterior fornix
447
370
-
Ile2
CAT
[ENA]
¢þ
>WENV180822784
ODJV01002369
[ODJV] human metagenome; G_DNA_Posterior fornix
488
414
-
Ala
TGC
[ENA]
¢þ
>WENV180822772
ODJV01000985
[ODJV] human metagenome; G_DNA_Posterior fornix
526
450
-
Met
CAT
[ENA]
¢þ
>WENV180822783
ODJV01001513
[ODJV] human metagenome; G_DNA_Posterior fornix
563
491
-
Thr
GGT
[ENA]
¢þ
>WENV180822782
ODJV01001477
[ODJV] human metagenome; G_DNA_Posterior fornix
565
636
+
Glu
TTC
[ENA]
¢þ
>WENV180822777
ODJV01001188
[ODJV] human metagenome; G_DNA_Posterior fornix
570
497
-
Asn
GTT
[ENA]
¢þ
>WENV180822771
ODJV01000985
[ODJV] human metagenome; G_DNA_Posterior fornix
607
531
-
Pro
TGG
[ENA]
¢þ
>WENV180822760
ODJV01000579
[ODJV] human metagenome; G_DNA_Posterior fornix
641
714
+
Pro
TGG
[ENA]
¢þ
>WENV180822778
ODJV01001297
[ODJV] human metagenome; G_DNA_Posterior fornix
692
764
+
Thr
CGT
[ENA]
¢þ
>WENV180822779
ODJV01001380
[ODJV] human metagenome; G_DNA_Posterior fornix
708
623
-
Leu
CAG
[ENA]
¢þ
>WENV180822770
ODJV01000985
[ODJV] human metagenome; G_DNA_Posterior fornix
731
655
-
Arg
ACG
[ENA]
¢þ
>WENV180822781
ODJV01001444
[ODJV] human metagenome; G_DNA_Posterior fornix
743
813
+
Gly
CCC
[ENA]
¢þ
>WENV180822768
ODJV01000875
[ODJV] human metagenome; G_DNA_Posterior fornix
805
722
-
Leu
TAG
[ENA]
¢þ
>WENV180822756
ODJV01000201
[ODJV] human metagenome; G_DNA_Posterior fornix
809
718
-
Ser
GCT
[ENA]
¢þ
>WENV180822769
ODJV01000985
[ODJV] human metagenome; G_DNA_Posterior fornix
809
735
-
Cys
GCA
[ENA]
¢þ
>WENV180822767
ODJV01000875
[ODJV] human metagenome; G_DNA_Posterior fornix
885
810
-
Lys
CTT
[ENA]
¢þ
>WENV180822755
ODJV01000201
[ODJV] human metagenome; G_DNA_Posterior fornix
885
810
-
Ile
GAT
[ENA]
¢þ
>WENV180822776
ODJV01000996
[ODJV] human metagenome; G_DNA_Posterior fornix
944
858
-
Leu
CAA
[ENA]
¢þ
>WENV180822766
ODJV01000875
[ODJV] human metagenome; G_DNA_Posterior fornix
1032
957
-
Thr
TGT
[ENA]
¢þ
>WENV180822754
ODJV01000201
[ODJV] human metagenome; G_DNA_Posterior fornix
1048
974
-
Phe
GAA
[ENA]
¢þ
>WENV180822761
ODJV01000596
[ODJV] human metagenome; G_DNA_Posterior fornix
1062
1137
+
Arg
CCT
[ENA]
¢þ
>WENV180822765
ODJV01000875
[ODJV] human metagenome; G_DNA_Posterior fornix
1109
1034
-
Val
TAC
[ENA]
¢þ
>WENV180822759
ODJV01000575
[ODJV] human metagenome; G_DNA_Posterior fornix
1126
1052
-
Thr
CGT
[ENA]
¢þ
>WENV180822757
ODJV01000212
[ODJV] human metagenome; G_DNA_Posterior fornix
1145
1226
+
Leu
CAA
[ENA]
¢þ
>WENV180822758
ODJV01000256
[ODJV] human metagenome; G_DNA_Posterior fornix
1162
1077
-
Leu
CAG
[ENA]
¢þ
>WENV180822753
ODJV01000201
[ODJV] human metagenome; G_DNA_Posterior fornix
1203
1128
-
fMet
CAT
[ENA]
¢þ
>WENV180822752
ODJV01000201
[ODJV] human metagenome; G_DNA_Posterior fornix
1313
1238
-
Ile2
CAT
[ENA]
¢þ
>WENV180822738
ODJV01000047
[ODJV] human metagenome; G_DNA_Posterior fornix
1398
1474
+
Arg
TCT
[ENA]
¢þ
>WENV180822751
ODJV01000201
[ODJV] human metagenome; G_DNA_Posterior fornix
1400
1325
-
Met
CAT
[ENA]
¢þ
>WENV180822750
ODJV01000201
[ODJV] human metagenome; G_DNA_Posterior fornix
1500
1427
-
Pro
TGG
[ENA]
¢þ
>WENV180822739
ODJV01000047
[ODJV] human metagenome; G_DNA_Posterior fornix
1550
1626
+
Arg
TCG
[ENA]
¢þ
>WENV180822741
ODJV01000068
[ODJV] human metagenome; G_DNA_Posterior fornix
1572
1499
-
Gly
GCC
[ENA]
¢þ
>WENV180822749
ODJV01000201
[ODJV] human metagenome; G_DNA_Posterior fornix
1580
1504
-
Arg
ACG
[ENA]
¢þ
>WENV180822748
ODJV01000201
[ODJV] human metagenome; G_DNA_Posterior fornix
1676
1589
-
Leu
TAA
[ENA]
¢þ
>WENV180822747
ODJV01000201
[ODJV] human metagenome; G_DNA_Posterior fornix
1759
1688
-
Gly
GCC
[ENA]
¢þ
>WENV180822746
ODJV01000201
[ODJV] human metagenome; G_DNA_Posterior fornix
1837
1764
-
Thr
TGT
[ENA]
¢þ
>WENV180822745
ODJV01000201
[ODJV] human metagenome; G_DNA_Posterior fornix
1952
1869
-
Leu
TAG
[ENA]
¢þ
>WENV180822744
ODJV01000201
[ODJV] human metagenome; G_DNA_Posterior fornix
2039
1967
-
Lys
TTT
[ENA]
¢þ
>WENV180822743
ODJV01000201
[ODJV] human metagenome; G_DNA_Posterior fornix
2115
2040
-
Val
TAC
[ENA]
¢þ
>WENV180822742
ODJV01000075
[ODJV] human metagenome; G_DNA_Posterior fornix
3493
3571
+
His
GTG
[ENA]
¢þ
>WENV180822740
ODJV01000062
[ODJV] human metagenome; G_DNA_Posterior fornix
3706
3781
+
Trp
CCA
[ENA]
¢þ
>WENV180822721
ODJV01000002
[ODJV] human metagenome; G_DNA_Posterior fornix
5306
5234
-
Arg
CCT
[ENA]
¢þ
>WENV180822736
ODJV01000030
[ODJV] human metagenome; G_DNA_Posterior fornix
5645
5560
-
Leu
CAA
[ENA]
¢þ
>WENV180822735
ODJV01000030
[ODJV] human metagenome; G_DNA_Posterior fornix
5748
5678
-
Cys
GCA
[ENA]
¢þ
>WENV180822734
ODJV01000030
[ODJV] human metagenome; G_DNA_Posterior fornix
5844
5771
-
Gln
TTG
[ENA]
¢þ
>WENV180822733
ODJV01000030
[ODJV] human metagenome; G_DNA_Posterior fornix
5923
5850
-
His
GTG
[ENA]
¢þ
>WENV180822732
ODJV01000030
[ODJV] human metagenome; G_DNA_Posterior fornix
6009
5937
-
Trp
CCA
[ENA]
¢þ
>WENV180822728
ODJV01000004
[ODJV] human metagenome; G_DNA_Posterior fornix
17662
17579
-
Leu
CAG
[ENA]
¢þ
>WENV180822731
ODJV01000008
[ODJV] human metagenome; G_DNA_Posterior fornix
33380
33308
-
Thr
AGT
[ENA]
¢þ
>WENV180822730
ODJV01000007
[ODJV] human metagenome; G_DNA_Posterior fornix
41223
41149
-
Lys
CTT
[ENA]
¢þ
>WENV180822729
ODJV01000006
[ODJV] human metagenome; G_DNA_Posterior fornix
47789
47717
-
Thr
GGT
[ENA]
¢þ
>WENV180822718
ODJV01000001
[ODJV] human metagenome; G_DNA_Posterior fornix
48459
48388
-
Arg
CCG
[ENA]
¢þ
>WENV180822724
ODJV01000003
[ODJV] human metagenome; G_DNA_Posterior fornix
50169
50097
-
Gly
CCC
[ENA]
¢þ
>WENV180822719
ODJV01000002
[ODJV] human metagenome; G_DNA_Posterior fornix
64598
64671
+
Arg
TCT
[ENA]
¢þ
>WENV180822711
ODJV01000001
[ODJV] human metagenome; G_DNA_Posterior fornix
72223
72296
+
Gln
TTG
[ENA]
¢þ
>WENV180822712
ODJV01000001
[ODJV] human metagenome; G_DNA_Posterior fornix
73428
73511
+
Tyr
GTA
[ENA]
¢þ
>WENV180822713
ODJV01000001
[ODJV] human metagenome; G_DNA_Posterior fornix
73517
73590
+
Gln
TTG
[ENA]
¢þ
>WENV180822720
ODJV01000002
[ODJV] human metagenome; G_DNA_Posterior fornix
77876
77962
+
Ser
CGA
[ENA]
¢þ
>WENV180822714
ODJV01000001
[ODJV] human metagenome; G_DNA_Posterior fornix
88291
88376
+
Leu
AAG
[ENA]
¢þ
>WENV180822722
ODJV01000003
[ODJV] human metagenome; G_DNA_Posterior fornix
162682
162753
+
Gly
GCC
[ENA]
¢þ
>WENV180822723
ODJV01000003
[ODJV] human metagenome; G_DNA_Posterior fornix
162791
162866
+
Pro
CGG
[ENA]
¢þ
>WENV180822715
ODJV01000001
[ODJV] human metagenome; G_DNA_Posterior fornix
177762
177836
+
Thr
CGT
[ENA]
¢þ
>WENV180822717
ODJV01000001
[ODJV] human metagenome; G_DNA_Posterior fornix
193678
193606
-
Gln
CTG
[ENA]
¢þ
>WENV180822716
ODJV01000001
[ODJV] human metagenome; G_DNA_Posterior fornix
193755
193682
-
Glu
CTC
[ENA]
¢þ
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
View ClustalW result
BACK