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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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|
Keyword
|
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|
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HOW TO USE
tRNA gene List
[ODKP] human metagenome; G_DNA_Anterior nares
HIT:
101 sequence(s).
Download Sequence
View ClustalW result
The reliable tRNA genes
All candidate tRNA genes
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
>WENV180844923
ODKP01030125
[ODKP] human metagenome; G_DNA_Anterior nares
1
72
+
Glu
TTC
[ENA]
¢þ
>WENV180844914
ODKP01024924
[ODKP] human metagenome; G_DNA_Anterior nares
1
91
+
Ser
GCT
[ENA]
¢þ
>WENV180844823
ODKP01000001
[ODKP] human metagenome; G_DNA_Anterior nares
5
78
+
Asn
GTT
[ENA]
¢þ
>WENV180844863
ODKP01005199
[ODKP] human metagenome; G_DNA_Anterior nares
12
98
+
Ser
TGA
[ENA]
¢þ
>WENV180844907
ODKP01022586
[ODKP] human metagenome; G_DNA_Anterior nares
19
95
+
Leu
CAA
[ENA]
¢þ
>WENV180844905
ODKP01021917
[ODKP] human metagenome; G_DNA_Anterior nares
21
95
+
Arg
CCG
[ENA]
¢þ
>WENV180844920
ODKP01027827
[ODKP] human metagenome; G_DNA_Anterior nares
33
106
+
Thr
CGT
[ENA]
¢þ
>WENV180844888
ODKP01013000
[ODKP] human metagenome; G_DNA_Anterior nares
34
110
+
Pro
CGG
[ENA]
¢þ
>WENV180844860
ODKP01002060
[ODKP] human metagenome; G_DNA_Anterior nares
41
113
+
Gln
TTG
[ENA]
¢þ
>WENV180844870
ODKP01007134
[ODKP] human metagenome; G_DNA_Anterior nares
45
118
+
Trp
CCA
[ENA]
¢þ
>WENV180844917
ODKP01025523
[ODKP] human metagenome; G_DNA_Anterior nares
47
121
+
Ile
GAT
[ENA]
¢þ
>WENV180844862
ODKP01004354
[ODKP] human metagenome; G_DNA_Anterior nares
49
122
+
Lys
CTT
[ENA]
¢þ
>WENV180844847
ODKP01000663
[ODKP] human metagenome; G_DNA_Anterior nares
50
123
+
fMet
CAT
[ENA]
¢þ
>WENV180844834
ODKP01000350
[ODKP] human metagenome; G_DNA_Anterior nares
61
133
+
Lys
TTT
[ENA]
¢þ
>WENV180844865
ODKP01005639
[ODKP] human metagenome; G_DNA_Anterior nares
62
135
+
Arg
TCT
[ENA]
¢þ
>WENV180844921
ODKP01027888
[ODKP] human metagenome; G_DNA_Anterior nares
67
142
+
Ala
TGC
[ENA]
¢þ
>WENV180844879
ODKP01009000
[ODKP] human metagenome; G_DNA_Anterior nares
68
142
+
Ala
TGC
[ENA]
¢þ
>WENV180844876
ODKP01008760
[ODKP] human metagenome; G_DNA_Anterior nares
70
145
+
Lys
CTT
[ENA]
¢þ
>WENV180844916
ODKP01025216
[ODKP] human metagenome; G_DNA_Anterior nares
72
145
+
Gly
GCC
[ENA]
¢þ
>WENV180844830
ODKP01000253
[ODKP] human metagenome; G_DNA_Anterior nares
77
3
-
Ala
TGC
[ENA]
¢þ
>WENV180844898
ODKP01019444
[ODKP] human metagenome; G_DNA_Anterior nares
83
170
+
Ser
CGA
[ENA]
¢þ
>WENV180844902
ODKP01021386
[ODKP] human metagenome; G_DNA_Anterior nares
89
14
-
His
GTG
[ENA]
¢þ
>WENV180844872
ODKP01007433
[ODKP] human metagenome; G_DNA_Anterior nares
91
19
-
Glu
TTC
[ENA]
¢þ
>WENV180844894
ODKP01016456
[ODKP] human metagenome; G_DNA_Anterior nares
91
164
+
Arg
CCG
[ENA]
¢þ
>WENV180844883
ODKP01010148
[ODKP] human metagenome; G_DNA_Anterior nares
101
174
+
Glu
TTC
[ENA]
¢þ
>WENV180844904
ODKP01021622
[ODKP] human metagenome; G_DNA_Anterior nares
101
174
+
Arg
ACG
[ENA]
¢þ
>WENV180844874
ODKP01008439
[ODKP] human metagenome; G_DNA_Anterior nares
101
177
+
Ile
GAT
[ENA]
¢þ
>WENV180844896
ODKP01016874
[ODKP] human metagenome; G_DNA_Anterior nares
102
30
-
Trp
CCA
[ENA]
¢þ
>WENV180844908
ODKP01023063
[ODKP] human metagenome; G_DNA_Anterior nares
107
22
-
Leu
GAG
[ENA]
¢þ
>WENV180844884
ODKP01011329
[ODKP] human metagenome; G_DNA_Anterior nares
109
36
-
Trp
CCA
[ENA]
¢þ
>WENV180844912
ODKP01023490
[ODKP] human metagenome; G_DNA_Anterior nares
109
184
+
Ile2
CAT
[ENA]
¢þ
>WENV180844867
ODKP01006494
[ODKP] human metagenome; G_DNA_Anterior nares
111
200
+
Ser
GGA
[ENA]
¢þ
>WENV180844892
ODKP01015584
[ODKP] human metagenome; G_DNA_Anterior nares
112
184
+
Thr
GGT
[ENA]
¢þ
>WENV180844901
ODKP01020885
[ODKP] human metagenome; G_DNA_Anterior nares
112
188
+
Arg
TCT
[ENA]
¢þ
>WENV180844915
ODKP01025175
[ODKP] human metagenome; G_DNA_Anterior nares
118
44
-
Thr
TGT
[ENA]
¢þ
>WENV180844911
ODKP01023366
[ODKP] human metagenome; G_DNA_Anterior nares
119
44
-
fMet
CAT
[ENA]
¢þ
>WENV180844873
ODKP01007574
[ODKP] human metagenome; G_DNA_Anterior nares
120
193
+
Lys
CTT
[ENA]
¢þ
>WENV180844918
ODKP01026139
[ODKP] human metagenome; G_DNA_Anterior nares
123
52
-
Cys
GCA
[ENA]
¢þ
>WENV180844871
ODKP01007410
[ODKP] human metagenome; G_DNA_Anterior nares
126
51
-
Val
TAC
[ENA]
¢þ
>WENV180844869
ODKP01006886
[ODKP] human metagenome; G_DNA_Anterior nares
126
52
-
Asn
GTT
[ENA]
¢þ
>WENV180844848
ODKP01000663
[ODKP] human metagenome; G_DNA_Anterior nares
126
200
+
Phe
GAA
[ENA]
¢þ
>WENV180844844
ODKP01000427
[ODKP] human metagenome; G_DNA_Anterior nares
129
56
-
Glu
TTC
[ENA]
¢þ
>WENV180844909
ODKP01023146
[ODKP] human metagenome; G_DNA_Anterior nares
132
50
-
Leu
TAA
[ENA]
¢þ
>WENV180844866
ODKP01005929
[ODKP] human metagenome; G_DNA_Anterior nares
133
59
-
Asp
GTC
[ENA]
¢þ
>WENV180844890
ODKP01014136
[ODKP] human metagenome; G_DNA_Anterior nares
134
209
+
Ile
GAT
[ENA]
¢þ
>WENV180844889
ODKP01013228
[ODKP] human metagenome; G_DNA_Anterior nares
136
60
-
Ile
GAT
[ENA]
¢þ
>WENV180844903
ODKP01021451
[ODKP] human metagenome; G_DNA_Anterior nares
136
61
-
Ala
TGC
[ENA]
¢þ
>WENV180844885
ODKP01011726
[ODKP] human metagenome; G_DNA_Anterior nares
136
62
-
Asp
GTC
[ENA]
¢þ
>WENV180844900
ODKP01020475
[ODKP] human metagenome; G_DNA_Anterior nares
137
212
+
Arg
CCT
[ENA]
¢þ
>WENV180844835
ODKP01000350
[ODKP] human metagenome; G_DNA_Anterior nares
138
221
+
Leu
TAG
[ENA]
¢þ
>WENV180844899
ODKP01020127
[ODKP] human metagenome; G_DNA_Anterior nares
144
218
+
Arg
CCG
[ENA]
¢þ
>WENV180844897
ODKP01018626
[ODKP] human metagenome; G_DNA_Anterior nares
154
82
-
Lys
TTT
[ENA]
¢þ
>WENV180844922
ODKP01028620
[ODKP] human metagenome; G_DNA_Anterior nares
157
85
-
Glu
CTC
[ENA]
¢þ
>WENV180844893
ODKP01016377
[ODKP] human metagenome; G_DNA_Anterior nares
158
84
-
Arg
TCT
[ENA]
¢þ
>WENV180844887
ODKP01012815
[ODKP] human metagenome; G_DNA_Anterior nares
158
84
-
Ala
TGC
[ENA]
¢þ
>WENV180844919
ODKP01027528
[ODKP] human metagenome; G_DNA_Anterior nares
162
86
-
Arg
CCT
[ENA]
¢þ
>WENV180844877
ODKP01008765
[ODKP] human metagenome; G_DNA_Anterior nares
162
234
+
Thr
CGT
[ENA]
¢þ
>WENV180844886
ODKP01012221
[ODKP] human metagenome; G_DNA_Anterior nares
167
240
+
Cys
GCA
[ENA]
¢þ
>WENV180844825
ODKP01000127
[ODKP] human metagenome; G_DNA_Anterior nares
167
241
+
Ile
GAT
[ENA]
¢þ
>WENV180844882
ODKP01009898
[ODKP] human metagenome; G_DNA_Anterior nares
168
94
-
Met
CAT
[ENA]
¢þ
>WENV180844861
ODKP01002231
[ODKP] human metagenome; G_DNA_Anterior nares
172
85
-
Ser
GCT
[ENA]
¢þ
>WENV180844895
ODKP01016769
[ODKP] human metagenome; G_DNA_Anterior nares
174
100
-
Pro
TGG
[ENA]
¢þ
>WENV180844906
ODKP01022128
[ODKP] human metagenome; G_DNA_Anterior nares
175
104
-
Gly
TCC
[ENA]
¢þ
>WENV180844913
ODKP01024432
[ODKP] human metagenome; G_DNA_Anterior nares
195
125
-
Val
TAC
[ENA]
¢þ
>WENV180844878
ODKP01008922
[ODKP] human metagenome; G_DNA_Anterior nares
203
129
-
Leu
TAA
[ENA]
¢þ
>WENV180844875
ODKP01008439
[ODKP] human metagenome; G_DNA_Anterior nares
203
279
+
Val
TAC
[ENA]
¢þ
>WENV180844880
ODKP01009186
[ODKP] human metagenome; G_DNA_Anterior nares
206
134
-
Arg
CCT
[ENA]
¢þ
>WENV180844910
ODKP01023366
[ODKP] human metagenome; G_DNA_Anterior nares
209
125
-
Tyr
GTA
[ENA]
¢þ
>WENV180844827
ODKP01000211
[ODKP] human metagenome; G_DNA_Anterior nares
209
134
-
Lys
CTT
[ENA]
¢þ
>WENV180844849
ODKP01000663
[ODKP] human metagenome; G_DNA_Anterior nares
213
295
+
Tyr
GTA
[ENA]
¢þ
>WENV180844843
ODKP01000427
[ODKP] human metagenome; G_DNA_Anterior nares
218
143
-
Ile
GAT
[ENA]
¢þ
>WENV180844859
ODKP01001067
[ODKP] human metagenome; G_DNA_Anterior nares
222
151
-
Gln
TTG
[ENA]
¢þ
>WENV180844836
ODKP01000350
[ODKP] human metagenome; G_DNA_Anterior nares
239
311
+
Thr
TGT
[ENA]
¢þ
>WENV180844881
ODKP01009340
[ODKP] human metagenome; G_DNA_Anterior nares
240
150
-
Ser
CGA
[ENA]
¢þ
>WENV180844868
ODKP01006549
[ODKP] human metagenome; G_DNA_Anterior nares
246
172
-
Met
CAT
[ENA]
¢þ
>WENV180844891
ODKP01015001
[ODKP] human metagenome; G_DNA_Anterior nares
249
175
-
Asp
GTC
[ENA]
¢þ
>WENV180844826
ODKP01000127
[ODKP] human metagenome; G_DNA_Anterior nares
257
331
+
Ala
TGC
[ENA]
¢þ
>WENV180844864
ODKP01005247
[ODKP] human metagenome; G_DNA_Anterior nares
278
360
+
Leu
CAG
[ENA]
¢þ
>WENV180844850
ODKP01000663
[ODKP] human metagenome; G_DNA_Anterior nares
298
370
+
Trp
CCA
[ENA]
¢þ
>WENV180844833
ODKP01000279
[ODKP] human metagenome; G_DNA_Anterior nares
303
376
+
Ala
TGC
[ENA]
¢þ
>WENV180844842
ODKP01000427
[ODKP] human metagenome; G_DNA_Anterior nares
323
251
-
Gly
TCC
[ENA]
¢þ
>WENV180844837
ODKP01000350
[ODKP] human metagenome; G_DNA_Anterior nares
334
405
+
Gly
GCC
[ENA]
¢þ
>WENV180844828
ODKP01000244
[ODKP] human metagenome; G_DNA_Anterior nares
337
410
+
Pro
TGG
[ENA]
¢þ
>WENV180844854
ODKP01000732
[ODKP] human metagenome; G_DNA_Anterior nares
358
430
+
Gln
CTG
[ENA]
¢þ
>WENV180844858
ODKP01000884
[ODKP] human metagenome; G_DNA_Anterior nares
360
275
-
Ser
TGA
[ENA]
¢þ
>WENV180844851
ODKP01000663
[ODKP] human metagenome; G_DNA_Anterior nares
383
457
+
His
GTG
[ENA]
¢þ
>WENV180844846
ODKP01000611
[ODKP] human metagenome; G_DNA_Anterior nares
389
304
-
Ser
GGA
[ENA]
¢þ
>WENV180844841
ODKP01000427
[ODKP] human metagenome; G_DNA_Anterior nares
400
328
-
Val
TAC
[ENA]
¢þ
>WENV180844838
ODKP01000350
[ODKP] human metagenome; G_DNA_Anterior nares
413
498
+
Leu
TAA
[ENA]
¢þ
>WENV180844855
ODKP01000732
[ODKP] human metagenome; G_DNA_Anterior nares
450
523
+
Glu
CTC
[ENA]
¢þ
>WENV180844856
ODKP01000826
[ODKP] human metagenome; G_DNA_Anterior nares
451
534
+
Tyr
GTA
[ENA]
¢þ
>WENV180844852
ODKP01000663
[ODKP] human metagenome; G_DNA_Anterior nares
469
542
+
Gln
TTG
[ENA]
¢þ
>WENV180844839
ODKP01000350
[ODKP] human metagenome; G_DNA_Anterior nares
510
583
+
Arg
ACG
[ENA]
¢þ
>WENV180844857
ODKP01000835
[ODKP] human metagenome; G_DNA_Anterior nares
525
607
+
Leu
TAG
[ENA]
¢þ
>WENV180844853
ODKP01000663
[ODKP] human metagenome; G_DNA_Anterior nares
550
635
+
Leu
CAA
[ENA]
¢þ
>WENV180844845
ODKP01000477
[ODKP] human metagenome; G_DNA_Anterior nares
593
667
+
Cys
GCA
[ENA]
¢þ
>WENV180844831
ODKP01000259
[ODKP] human metagenome; G_DNA_Anterior nares
597
672
+
Gly
TCC
[ENA]
¢þ
>WENV180844840
ODKP01000350
[ODKP] human metagenome; G_DNA_Anterior nares
598
673
+
Pro
TGG
[ENA]
¢þ
>WENV180844824
ODKP01000007
[ODKP] human metagenome; G_DNA_Anterior nares
600
672
+
Sup
CTA
[ENA]
¢þ
>WENV180844829
ODKP01000244
[ODKP] human metagenome; G_DNA_Anterior nares
622
706
+
Tyr
GTA
[ENA]
¢þ
>WENV180844832
ODKP01000259
[ODKP] human metagenome; G_DNA_Anterior nares
677
749
+
Gly
GCC
[ENA]
¢þ
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
View ClustalW result
BACK