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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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|
Keyword
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BLAST
|
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HOW TO USE
tRNA gene List
[ODLW] human metagenome; G_DNA_Anterior nares
HIT:
9 sequence(s).
Download Sequence
View ClustalW result
The reliable tRNA genes
All candidate tRNA genes
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
>WENV180878518
ODLW01000049
[ODLW] human metagenome; G_DNA_Anterior nares
68
140
+
Lys
TTT
[ENA]
¢þ
>WENV180878525
ODLW01000220
[ODLW] human metagenome; G_DNA_Anterior nares
104
31
-
Gln
TTG
[ENA]
¢þ
>WENV180878522
ODLW01000159
[ODLW] human metagenome; G_DNA_Anterior nares
110
37
-
Val
CAC
[ENA]
¢þ
>WENV180878526
ODLW01000698
[ODLW] human metagenome; G_DNA_Anterior nares
129
57
-
Gln
CTG
[ENA]
¢þ
>WENV180878519
ODLW01000049
[ODLW] human metagenome; G_DNA_Anterior nares
164
238
+
Arg
TCG
[ENA]
¢þ
>WENV180878521
ODLW01000159
[ODLW] human metagenome; G_DNA_Anterior nares
182
111
-
Cys
GCA
[ENA]
¢þ
>WENV180878524
ODLW01000220
[ODLW] human metagenome; G_DNA_Anterior nares
191
108
-
Tyr
GTA
[ENA]
¢þ
>WENV180878523
ODLW01000220
[ODLW] human metagenome; G_DNA_Anterior nares
282
208
-
Phe
GAA
[ENA]
¢þ
>WENV180878520
ODLW01000159
[ODLW] human metagenome; G_DNA_Anterior nares
283
210
-
Gly
GCC
[ENA]
¢þ
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
View ClustalW result
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