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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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|
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HOW TO USE
tRNA gene List
[ODMF] human metagenome; G_DNA_Posterior fornix
HIT:
114 sequence(s).
Download Sequence
View ClustalW result
The reliable tRNA genes
All candidate tRNA genes
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
>WENV180887161
ODMF01003850
[ODMF] human metagenome; G_DNA_Posterior fornix
1
72
+
Glu
TTC
[ENA]
¢þ
>WENV180887159
ODMF01002735
[ODMF] human metagenome; G_DNA_Posterior fornix
9
83
+
Ala
TGC
[ENA]
¢þ
>WENV180887164
ODMF01004147
[ODMF] human metagenome; G_DNA_Posterior fornix
25
111
+
Leu
CAG
[ENA]
¢þ
>WENV180887104
ODMF01000102
[ODMF] human metagenome; G_DNA_Posterior fornix
60
134
+
Val
TAC
[ENA]
¢þ
>WENV180887150
ODMF01000859
[ODMF] human metagenome; G_DNA_Posterior fornix
66
140
+
Asn
GTT
[ENA]
¢þ
>WENV180887140
ODMF01000261
[ODMF] human metagenome; G_DNA_Posterior fornix
66
140
+
Asn
GTT
[ENA]
¢þ
>WENV180887087
ODMF01000027
[ODMF] human metagenome; G_DNA_Posterior fornix
66
140
+
Asn
GTT
[ENA]
¢þ
>WENV180887136
ODMF01000140
[ODMF] human metagenome; G_DNA_Posterior fornix
67
140
+
Asn
GTT
[ENA]
¢þ
>WENV180887170
ODMF01009524
[ODMF] human metagenome; G_DNA_Posterior fornix
79
5
-
Gly
GCC
[ENA]
¢þ
>WENV180887167
ODMF01007923
[ODMF] human metagenome; G_DNA_Posterior fornix
102
175
+
Phe
GAA
[ENA]
¢þ
>WENV180887162
ODMF01003850
[ODMF] human metagenome; G_DNA_Posterior fornix
110
200
+
Ser
TGA
[ENA]
¢þ
>WENV180887149
ODMF01000791
[ODMF] human metagenome; G_DNA_Posterior fornix
117
43
-
Ile2
CAT
[ENA]
¢þ
>WENV180887148
ODMF01000684
[ODMF] human metagenome; G_DNA_Posterior fornix
119
46
-
fMet
CAT
[ENA]
¢þ
>WENV180887169
ODMF01008074
[ODMF] human metagenome; G_DNA_Posterior fornix
121
37
-
Leu
CAA
[ENA]
¢þ
>WENV180887168
ODMF01007994
[ODMF] human metagenome; G_DNA_Posterior fornix
131
42
-
Ser
CGA
[ENA]
¢þ
>WENV180887105
ODMF01000102
[ODMF] human metagenome; G_DNA_Posterior fornix
138
210
+
Lys
TTT
[ENA]
¢þ
>WENV180887154
ODMF01001659
[ODMF] human metagenome; G_DNA_Posterior fornix
139
213
+
Ala
GGC
[ENA]
¢þ
>WENV180887157
ODMF01002305
[ODMF] human metagenome; G_DNA_Posterior fornix
141
215
+
Asn
GTT
[ENA]
¢þ
>WENV180887166
ODMF01004801
[ODMF] human metagenome; G_DNA_Posterior fornix
142
217
+
His
GTG
[ENA]
¢þ
>WENV180887163
ODMF01004071
[ODMF] human metagenome; G_DNA_Posterior fornix
148
74
-
Ala
TGC
[ENA]
¢þ
>WENV180887088
ODMF01000027
[ODMF] human metagenome; G_DNA_Posterior fornix
149
241
+
Ser
GGA
[ENA]
¢þ
>WENV180887165
ODMF01004673
[ODMF] human metagenome; G_DNA_Posterior fornix
155
65
-
Ser
GCT
[ENA]
¢þ
>WENV180887158
ODMF01002422
[ODMF] human metagenome; G_DNA_Posterior fornix
180
109
-
Gln
CTG
[ENA]
¢þ
>WENV180887160
ODMF01003243
[ODMF] human metagenome; G_DNA_Posterior fornix
186
111
-
Ala
TGC
[ENA]
¢þ
>WENV180887156
ODMF01002175
[ODMF] human metagenome; G_DNA_Posterior fornix
210
137
-
Asn
GTT
[ENA]
¢þ
>WENV180887106
ODMF01000102
[ODMF] human metagenome; G_DNA_Posterior fornix
223
306
+
Leu
TAG
[ENA]
¢þ
>WENV180887153
ODMF01001623
[ODMF] human metagenome; G_DNA_Posterior fornix
257
183
-
Glu
TTC
[ENA]
¢þ
>WENV180887155
ODMF01001829
[ODMF] human metagenome; G_DNA_Posterior fornix
264
173
-
Ser
GCT
[ENA]
¢þ
>WENV180887152
ODMF01001076
[ODMF] human metagenome; G_DNA_Posterior fornix
272
345
+
Asn
GTT
[ENA]
¢þ
>WENV180887151
ODMF01001005
[ODMF] human metagenome; G_DNA_Posterior fornix
303
228
-
Lys
CTT
[ENA]
¢þ
>WENV180887107
ODMF01000102
[ODMF] human metagenome; G_DNA_Posterior fornix
329
403
+
Thr
TGT
[ENA]
¢þ
>WENV180887147
ODMF01000521
[ODMF] human metagenome; G_DNA_Posterior fornix
339
413
+
His
GTG
[ENA]
¢þ
>WENV180887141
ODMF01000265
[ODMF] human metagenome; G_DNA_Posterior fornix
345
417
+
Asn
GTT
[ENA]
¢þ
>WENV180887145
ODMF01000335
[ODMF] human metagenome; G_DNA_Posterior fornix
359
285
-
Arg
TCT
[ENA]
¢þ
>WENV180887108
ODMF01000102
[ODMF] human metagenome; G_DNA_Posterior fornix
413
484
+
Gly
GCC
[ENA]
¢þ
>WENV180887142
ODMF01000265
[ODMF] human metagenome; G_DNA_Posterior fornix
421
513
+
Ser
GGA
[ENA]
¢þ
>WENV180887109
ODMF01000102
[ODMF] human metagenome; G_DNA_Posterior fornix
496
581
+
Leu
TAA
[ENA]
¢þ
>WENV180887110
ODMF01000102
[ODMF] human metagenome; G_DNA_Posterior fornix
590
664
+
Arg
ACG
[ENA]
¢þ
>WENV180887146
ODMF01000396
[ODMF] human metagenome; G_DNA_Posterior fornix
602
529
-
Pro
CGG
[ENA]
¢þ
>WENV180887103
ODMF01000074
[ODMF] human metagenome; G_DNA_Posterior fornix
628
556
-
Gln
CTG
[ENA]
¢þ
>WENV180887111
ODMF01000102
[ODMF] human metagenome; G_DNA_Posterior fornix
672
745
+
Pro
TGG
[ENA]
¢þ
>WENV180887102
ODMF01000074
[ODMF] human metagenome; G_DNA_Posterior fornix
706
633
-
Glu
CTC
[ENA]
¢þ
>WENV180887112
ODMF01000102
[ODMF] human metagenome; G_DNA_Posterior fornix
775
850
+
Met
CAT
[ENA]
¢þ
>WENV180887144
ODMF01000320
[ODMF] human metagenome; G_DNA_Posterior fornix
837
763
-
Ala
TGC
[ENA]
¢þ
>WENV180887113
ODMF01000102
[ODMF] human metagenome; G_DNA_Posterior fornix
862
937
+
Ile2
CAT
[ENA]
¢þ
>WENV180887101
ODMF01000073
[ODMF] human metagenome; G_DNA_Posterior fornix
921
851
-
Gly
CCC
[ENA]
¢þ
>WENV180887143
ODMF01000320
[ODMF] human metagenome; G_DNA_Posterior fornix
928
854
-
Ile
GAT
[ENA]
¢þ
>WENV180887114
ODMF01000102
[ODMF] human metagenome; G_DNA_Posterior fornix
959
1034
+
fMet
CAT
[ENA]
¢þ
>WENV180887115
ODMF01000102
[ODMF] human metagenome; G_DNA_Posterior fornix
1036
1111
+
Asp
GTC
[ENA]
¢þ
>WENV180887116
ODMF01000102
[ODMF] human metagenome; G_DNA_Posterior fornix
1116
1190
+
Phe
GAA
[ENA]
¢þ
>WENV180887117
ODMF01000102
[ODMF] human metagenome; G_DNA_Posterior fornix
1284
1360
+
Ile
GAT
[ENA]
¢þ
>WENV180887131
ODMF01000118
[ODMF] human metagenome; G_DNA_Posterior fornix
1326
1238
-
Ser
CGA
[ENA]
¢þ
>WENV180887118
ODMF01000102
[ODMF] human metagenome; G_DNA_Posterior fornix
1362
1452
+
Ser
GCT
[ENA]
¢þ
>WENV180887089
ODMF01000027
[ODMF] human metagenome; G_DNA_Posterior fornix
1368
1440
+
Glu
TTC
[ENA]
¢þ
>WENV180887090
ODMF01000027
[ODMF] human metagenome; G_DNA_Posterior fornix
1444
1518
+
Val
TAC
[ENA]
¢þ
>WENV180887139
ODMF01000166
[ODMF] human metagenome; G_DNA_Posterior fornix
1663
1589
-
Arg
CCT
[ENA]
¢þ
>WENV180887119
ODMF01000102
[ODMF] human metagenome; G_DNA_Posterior fornix
2207
2280
+
Glu
TTC
[ENA]
¢þ
>WENV180887130
ODMF01000104
[ODMF] human metagenome; G_DNA_Posterior fornix
2276
2350
+
Thr
AGT
[ENA]
¢þ
>WENV180887133
ODMF01000125
[ODMF] human metagenome; G_DNA_Posterior fornix
2301
2215
-
Leu
CAG
[ENA]
¢þ
>WENV180887120
ODMF01000102
[ODMF] human metagenome; G_DNA_Posterior fornix
2313
2399
+
Ser
TGA
[ENA]
¢þ
>WENV180887121
ODMF01000102
[ODMF] human metagenome; G_DNA_Posterior fornix
2410
2485
+
fMet
CAT
[ENA]
¢þ
>WENV180887122
ODMF01000102
[ODMF] human metagenome; G_DNA_Posterior fornix
2487
2562
+
Asp
GTC
[ENA]
¢þ
>WENV180887123
ODMF01000102
[ODMF] human metagenome; G_DNA_Posterior fornix
2567
2642
+
Phe
GAA
[ENA]
¢þ
>WENV180887124
ODMF01000102
[ODMF] human metagenome; G_DNA_Posterior fornix
2646
2729
+
Tyr
GTA
[ENA]
¢þ
>WENV180887125
ODMF01000102
[ODMF] human metagenome; G_DNA_Posterior fornix
2732
2804
+
Trp
CCA
[ENA]
¢þ
>WENV180887126
ODMF01000102
[ODMF] human metagenome; G_DNA_Posterior fornix
2816
2889
+
His
GTG
[ENA]
¢þ
>WENV180887127
ODMF01000102
[ODMF] human metagenome; G_DNA_Posterior fornix
2895
2968
+
Gln
TTG
[ENA]
¢þ
>WENV180887128
ODMF01000102
[ODMF] human metagenome; G_DNA_Posterior fornix
2991
3061
+
Cys
GCA
[ENA]
¢þ
>WENV180887129
ODMF01000102
[ODMF] human metagenome; G_DNA_Posterior fornix
3102
3188
+
Leu
CAA
[ENA]
¢þ
>WENV180887135
ODMF01000129
[ODMF] human metagenome; G_DNA_Posterior fornix
3224
3300
+
Arg
TCT
[ENA]
¢þ
>WENV180887134
ODMF01000127
[ODMF] human metagenome; G_DNA_Posterior fornix
3415
3342
-
Arg
CCG
[ENA]
¢þ
>WENV180887091
ODMF01000043
[ODMF] human metagenome; G_DNA_Posterior fornix
3970
4055
+
Leu
AAG
[ENA]
¢þ
>WENV180887080
ODMF01000021
[ODMF] human metagenome; G_DNA_Posterior fornix
4219
4293
+
Arg
ACG
[ENA]
¢þ
>WENV180887081
ODMF01000021
[ODMF] human metagenome; G_DNA_Posterior fornix
4301
4374
+
Pro
TGG
[ENA]
¢þ
>WENV180887100
ODMF01000056
[ODMF] human metagenome; G_DNA_Posterior fornix
5173
5098
-
Arg
CCT
[ENA]
¢þ
>WENV180887138
ODMF01000141
[ODMF] human metagenome; G_DNA_Posterior fornix
5817
5745
-
Thr
GGT
[ENA]
¢þ
>WENV180887137
ODMF01000140
[ODMF] human metagenome; G_DNA_Posterior fornix
6310
6236
-
Lys
CTT
[ENA]
¢þ
>WENV180887132
ODMF01000124
[ODMF] human metagenome; G_DNA_Posterior fornix
8434
8508
+
Lys
CTT
[ENA]
¢þ
>WENV180887085
ODMF01000024
[ODMF] human metagenome; G_DNA_Posterior fornix
13240
13167
-
Gln
TTG
[ENA]
¢þ
>WENV180887084
ODMF01000024
[ODMF] human metagenome; G_DNA_Posterior fornix
13355
13274
-
Tyr
GTA
[ENA]
¢þ
>WENV180887096
ODMF01000046
[ODMF] human metagenome; G_DNA_Posterior fornix
14573
14644
+
Gly
CCC
[ENA]
¢þ
>WENV180887067
ODMF01000015
[ODMF] human metagenome; G_DNA_Posterior fornix
14829
14902
+
Glu
CTC
[ENA]
¢þ
>WENV180887068
ODMF01000015
[ODMF] human metagenome; G_DNA_Posterior fornix
14907
14979
+
Gln
CTG
[ENA]
¢þ
>WENV180887066
ODMF01000008
[ODMF] human metagenome; G_DNA_Posterior fornix
17551
17477
-
Gly
GCC
[ENA]
¢þ
>WENV180887065
ODMF01000008
[ODMF] human metagenome; G_DNA_Posterior fornix
17685
17610
-
Pro
CGG
[ENA]
¢þ
>WENV180887064
ODMF01000008
[ODMF] human metagenome; G_DNA_Posterior fornix
17801
17730
-
Gly
GCC
[ENA]
¢þ
>WENV180887099
ODMF01000048
[ODMF] human metagenome; G_DNA_Posterior fornix
19717
19802
+
Leu
CAG
[ENA]
¢þ
>WENV180887092
ODMF01000043
[ODMF] human metagenome; G_DNA_Posterior fornix
21820
21907
+
Ser
TGA
[ENA]
¢þ
>WENV180887093
ODMF01000043
[ODMF] human metagenome; G_DNA_Posterior fornix
21913
21988
+
Asp
GTC
[ENA]
¢þ
>WENV180887094
ODMF01000043
[ODMF] human metagenome; G_DNA_Posterior fornix
21994
22069
+
His
GTG
[ENA]
¢þ
>WENV180887095
ODMF01000043
[ODMF] human metagenome; G_DNA_Posterior fornix
22073
22147
+
Val
TAC
[ENA]
¢þ
>WENV180887098
ODMF01000046
[ODMF] human metagenome; G_DNA_Posterior fornix
23012
22940
-
Thr
GGT
[ENA]
¢þ
>WENV180887083
ODMF01000024
[ODMF] human metagenome; G_DNA_Posterior fornix
25381
25308
-
Gln
TTG
[ENA]
¢þ
>WENV180887097
ODMF01000046
[ODMF] human metagenome; G_DNA_Posterior fornix
25901
25829
-
Thr
GGT
[ENA]
¢þ
>WENV180887058
ODMF01000001
[ODMF] human metagenome; G_DNA_Posterior fornix
26297
26224
-
Trp
CCA
[ENA]
¢þ
>WENV180887074
ODMF01000016
[ODMF] human metagenome; G_DNA_Posterior fornix
28158
28071
-
Leu
AAG
[ENA]
¢þ
>WENV180887079
ODMF01000019
[ODMF] human metagenome; G_DNA_Posterior fornix
31210
31282
+
Trp
CCA
[ENA]
¢þ
>WENV180887082
ODMF01000024
[ODMF] human metagenome; G_DNA_Posterior fornix
35671
35596
-
Thr
CGT
[ENA]
¢þ
>WENV180887086
ODMF01000026
[ODMF] human metagenome; G_DNA_Posterior fornix
38759
38684
-
Arg
TCT
[ENA]
¢þ
>WENV180887073
ODMF01000016
[ODMF] human metagenome; G_DNA_Posterior fornix
48634
48561
-
Gln
TTG
[ENA]
¢þ
>WENV180887072
ODMF01000016
[ODMF] human metagenome; G_DNA_Posterior fornix
48721
48638
-
Tyr
GTA
[ENA]
¢þ
>WENV180887071
ODMF01000016
[ODMF] human metagenome; G_DNA_Posterior fornix
49140
49069
-
Gln
TTG
[ENA]
¢þ
>WENV180887069
ODMF01000016
[ODMF] human metagenome; G_DNA_Posterior fornix
51339
51411
+
Thr
CGT
[ENA]
¢þ
>WENV180887070
ODMF01000016
[ODMF] human metagenome; G_DNA_Posterior fornix
51472
51547
+
Arg
ACG
[ENA]
¢þ
>WENV180887078
ODMF01000018
[ODMF] human metagenome; G_DNA_Posterior fornix
52390
52305
-
Leu
CAA
[ENA]
¢þ
>WENV180887077
ODMF01000018
[ODMF] human metagenome; G_DNA_Posterior fornix
52487
52417
-
Cys
GCA
[ENA]
¢þ
>WENV180887076
ODMF01000018
[ODMF] human metagenome; G_DNA_Posterior fornix
52612
52539
-
His
GTG
[ENA]
¢þ
>WENV180887075
ODMF01000018
[ODMF] human metagenome; G_DNA_Posterior fornix
52697
52625
-
Trp
CCA
[ENA]
¢þ
>WENV180887061
ODMF01000005
[ODMF] human metagenome; G_DNA_Posterior fornix
55717
55792
+
Gln
TTG
[ENA]
¢þ
>WENV180887062
ODMF01000005
[ODMF] human metagenome; G_DNA_Posterior fornix
55891
55965
+
Asp
GTC
[ENA]
¢þ
>WENV180887063
ODMF01000006
[ODMF] human metagenome; G_DNA_Posterior fornix
67626
67697
+
Arg
CCG
[ENA]
¢þ
>WENV180887057
ODMF01000001
[ODMF] human metagenome; G_DNA_Posterior fornix
68868
68795
-
Trp
CCA
[ENA]
¢þ
>WENV180887060
ODMF01000003
[ODMF] human metagenome; G_DNA_Posterior fornix
72958
73032
+
Thr
AGT
[ENA]
¢þ
>WENV180887059
ODMF01000002
[ODMF] human metagenome; G_DNA_Posterior fornix
96574
96660
+
Ser
CGA
[ENA]
¢þ
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
View ClustalW result
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