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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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HOW TO USE
tRNA gene List
[ODND] human metagenome; G_DNA_R_Retroauricular crease
HIT:
62 sequence(s).
Download Sequence
View ClustalW result
The reliable tRNA genes
All candidate tRNA genes
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
>WENV180895665
ODND01006125
[ODND] human metagenome; G_DNA_R_Retroauricular crease
31
104
+
Val
CAC
[ENA]
¢þ
>WENV180895675
ODND01009834
[ODND] human metagenome; G_DNA_R_Retroauricular crease
33
106
+
Gln
TTG
[ENA]
¢þ
>WENV180895657
ODND01002415
[ODND] human metagenome; G_DNA_R_Retroauricular crease
36
108
+
Val
GAC
[ENA]
¢þ
>WENV180895667
ODND01006723
[ODND] human metagenome; G_DNA_R_Retroauricular crease
43
117
+
Glu
TTC
[ENA]
¢þ
>WENV180895642
ODND01001199
[ODND] human metagenome; G_DNA_R_Retroauricular crease
75
157
+
Tyr
GTA
[ENA]
¢þ
>WENV180895652
ODND01001582
[ODND] human metagenome; G_DNA_R_Retroauricular crease
81
7
-
Val
TAC
[ENA]
¢þ
>WENV180895672
ODND01008646
[ODND] human metagenome; G_DNA_R_Retroauricular crease
92
167
+
Thr
CGT
[ENA]
¢þ
>WENV180895674
ODND01009597
[ODND] human metagenome; G_DNA_R_Retroauricular crease
101
25
-
fMet
CAT
[ENA]
¢þ
>WENV180895660
ODND01002634
[ODND] human metagenome; G_DNA_R_Retroauricular crease
101
28
-
Arg
ACG
[ENA]
¢þ
>WENV180895671
ODND01008183
[ODND] human metagenome; G_DNA_R_Retroauricular crease
110
34
-
Arg
ACG
[ENA]
¢þ
>WENV180895676
ODND01009834
[ODND] human metagenome; G_DNA_R_Retroauricular crease
118
190
+
Cys
GCA
[ENA]
¢þ
>WENV180895638
ODND01000726
[ODND] human metagenome; G_DNA_R_Retroauricular crease
120
45
-
Glu
TTC
[ENA]
¢þ
>WENV180895668
ODND01006723
[ODND] human metagenome; G_DNA_R_Retroauricular crease
122
197
+
Val
TAC
[ENA]
¢þ
>WENV180895647
ODND01001346
[ODND] human metagenome; G_DNA_R_Retroauricular crease
129
58
-
Cys
GCA
[ENA]
¢þ
>WENV180895615
ODND01000023
[ODND] human metagenome; G_DNA_R_Retroauricular crease
135
207
+
Asn
GTT
[ENA]
¢þ
>WENV180895669
ODND01007775
[ODND] human metagenome; G_DNA_R_Retroauricular crease
138
64
-
Pro
GGG
[ENA]
¢þ
>WENV180895673
ODND01008728
[ODND] human metagenome; G_DNA_R_Retroauricular crease
146
73
-
Gly
TCC
[ENA]
¢þ
>WENV180895654
ODND01001721
[ODND] human metagenome; G_DNA_R_Retroauricular crease
173
247
+
Ala
TGC
[ENA]
¢þ
>WENV180895659
ODND01002602
[ODND] human metagenome; G_DNA_R_Retroauricular crease
178
253
+
Thr
TGT
[ENA]
¢þ
>WENV180895666
ODND01006503
[ODND] human metagenome; G_DNA_R_Retroauricular crease
180
88
-
Ser
TGA
[ENA]
¢þ
>WENV180895630
ODND01000429
[ODND] human metagenome; G_DNA_R_Retroauricular crease
196
122
-
Ala
TGC
[ENA]
¢þ
>WENV180895670
ODND01008183
[ODND] human metagenome; G_DNA_R_Retroauricular crease
211
123
-
Leu
TAA
[ENA]
¢þ
>WENV180895640
ODND01001032
[ODND] human metagenome; G_DNA_R_Retroauricular crease
217
290
+
Trp
CCA
[ENA]
¢þ
>WENV180895664
ODND01003947
[ODND] human metagenome; G_DNA_R_Retroauricular crease
226
142
-
Leu
TAG
[ENA]
¢þ
>WENV180895646
ODND01001346
[ODND] human metagenome; G_DNA_R_Retroauricular crease
230
157
-
Gly
GCC
[ENA]
¢þ
>WENV180895662
ODND01003389
[ODND] human metagenome; G_DNA_R_Retroauricular crease
231
303
+
Thr
GGT
[ENA]
¢þ
>WENV180895663
ODND01003907
[ODND] human metagenome; G_DNA_R_Retroauricular crease
234
310
+
Ile2
CAT
[ENA]
¢þ
>WENV180895649
ODND01001403
[ODND] human metagenome; G_DNA_R_Retroauricular crease
244
169
-
Glu
CTC
[ENA]
¢þ
>WENV180895650
ODND01001408
[ODND] human metagenome; G_DNA_R_Retroauricular crease
263
346
+
Leu
CAG
[ENA]
¢þ
>WENV180895637
ODND01000726
[ODND] human metagenome; G_DNA_R_Retroauricular crease
274
199
-
Ala
GGC
[ENA]
¢þ
>WENV180895658
ODND01002487
[ODND] human metagenome; G_DNA_R_Retroauricular crease
279
364
+
Ser
TGA
[ENA]
¢þ
>WENV180895661
ODND01002917
[ODND] human metagenome; G_DNA_R_Retroauricular crease
296
370
+
Lys
CTT
[ENA]
¢þ
>WENV180895636
ODND01000693
[ODND] human metagenome; G_DNA_R_Retroauricular crease
315
239
-
Pro
CGG
[ENA]
¢þ
>WENV180895656
ODND01001853
[ODND] human metagenome; G_DNA_R_Retroauricular crease
334
249
-
Ser
TGA
[ENA]
¢þ
>WENV180895643
ODND01001199
[ODND] human metagenome; G_DNA_R_Retroauricular crease
358
431
+
Thr
GGT
[ENA]
¢þ
>WENV180895645
ODND01001268
[ODND] human metagenome; G_DNA_R_Retroauricular crease
366
441
+
Trp
CCA
[ENA]
¢þ
>WENV180895620
ODND01000061
[ODND] human metagenome; G_DNA_R_Retroauricular crease
381
311
-
Met
CAT
[ENA]
¢þ
>WENV180895625
ODND01000316
[ODND] human metagenome; G_DNA_R_Retroauricular crease
384
458
+
Asp
GTC
[ENA]
¢þ
>WENV180895655
ODND01001853
[ODND] human metagenome; G_DNA_R_Retroauricular crease
440
358
-
Tyr
GTA
[ENA]
¢þ
>WENV180895648
ODND01001403
[ODND] human metagenome; G_DNA_R_Retroauricular crease
452
380
-
Gln
CTG
[ENA]
¢þ
>WENV180895639
ODND01001011
[ODND] human metagenome; G_DNA_R_Retroauricular crease
469
393
-
fMet
CAT
[ENA]
¢þ
>WENV180895641
ODND01001097
[ODND] human metagenome; G_DNA_R_Retroauricular crease
484
557
+
Asn
GTT
[ENA]
¢þ
>WENV180895653
ODND01001663
[ODND] human metagenome; G_DNA_R_Retroauricular crease
492
407
-
Ser
GGA
[ENA]
¢þ
>WENV180895644
ODND01001199
[ODND] human metagenome; G_DNA_R_Retroauricular crease
496
570
+
Met
CAT
[ENA]
¢þ
>WENV180895626
ODND01000316
[ODND] human metagenome; G_DNA_R_Retroauricular crease
519
594
+
Phe
GAA
[ENA]
¢þ
>WENV180895628
ODND01000353
[ODND] human metagenome; G_DNA_R_Retroauricular crease
529
604
+
Lys
TTT
[ENA]
¢þ
>WENV180895651
ODND01001520
[ODND] human metagenome; G_DNA_R_Retroauricular crease
545
470
-
Asn
GTT
[ENA]
¢þ
>WENV180895618
ODND01000059
[ODND] human metagenome; G_DNA_R_Retroauricular crease
548
618
+
Val
TAC
[ENA]
¢þ
>WENV180895635
ODND01000587
[ODND] human metagenome; G_DNA_R_Retroauricular crease
555
481
-
Lys
TTT
[ENA]
¢þ
>WENV180895633
ODND01000538
[ODND] human metagenome; G_DNA_R_Retroauricular crease
632
715
+
Leu
TAG
[ENA]
¢þ
>WENV180895632
ODND01000494
[ODND] human metagenome; G_DNA_R_Retroauricular crease
709
782
+
Ala
GGC
[ENA]
¢þ
>WENV180895634
ODND01000553
[ODND] human metagenome; G_DNA_R_Retroauricular crease
815
890
+
His
GTG
[ENA]
¢þ
>WENV180895623
ODND01000151
[ODND] human metagenome; G_DNA_R_Retroauricular crease
941
1016
+
Arg
TCT
[ENA]
¢þ
>WENV180895631
ODND01000482
[ODND] human metagenome; G_DNA_R_Retroauricular crease
1069
996
-
Arg
CCT
[ENA]
¢þ
>WENV180895629
ODND01000353
[ODND] human metagenome; G_DNA_R_Retroauricular crease
1209
1136
-
Thr
TGT
[ENA]
¢þ
>WENV180895627
ODND01000318
[ODND] human metagenome; G_DNA_R_Retroauricular crease
1263
1188
-
Ala
TGC
[ENA]
¢þ
>WENV180895624
ODND01000219
[ODND] human metagenome; G_DNA_R_Retroauricular crease
1359
1284
-
Thr
CGT
[ENA]
¢þ
>WENV180895619
ODND01000061
[ODND] human metagenome; G_DNA_R_Retroauricular crease
1607
1680
+
His
GTG
[ENA]
¢þ
>WENV180895616
ODND01000038
[ODND] human metagenome; G_DNA_R_Retroauricular crease
1632
1716
+
Leu
TAG
[ENA]
¢þ
>WENV180895622
ODND01000143
[ODND] human metagenome; G_DNA_R_Retroauricular crease
1643
1570
-
Gly
TCC
[ENA]
¢þ
>WENV180895621
ODND01000063
[ODND] human metagenome; G_DNA_R_Retroauricular crease
1966
2053
+
Ser
CGA
[ENA]
¢þ
>WENV180895617
ODND01000038
[ODND] human metagenome; G_DNA_R_Retroauricular crease
2093
2168
+
Arg
TCG
[ENA]
¢þ
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
View ClustalW result
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