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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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HOW TO USE
tRNA gene List
[ODPV] human metagenome; G_DNA_Buccal mucosa
HIT:
62 sequence(s).
Download Sequence
View ClustalW result
The reliable tRNA genes
All candidate tRNA genes
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
>WENV180906984
ODPV01006125
[ODPV] human metagenome; G_DNA_Buccal mucosa
31
104
+
Val
CAC
[ENA]
¢þ
>WENV180906994
ODPV01009834
[ODPV] human metagenome; G_DNA_Buccal mucosa
33
106
+
Gln
TTG
[ENA]
¢þ
>WENV180906976
ODPV01002415
[ODPV] human metagenome; G_DNA_Buccal mucosa
36
108
+
Val
GAC
[ENA]
¢þ
>WENV180906986
ODPV01006723
[ODPV] human metagenome; G_DNA_Buccal mucosa
43
117
+
Glu
TTC
[ENA]
¢þ
>WENV180906961
ODPV01001199
[ODPV] human metagenome; G_DNA_Buccal mucosa
75
157
+
Tyr
GTA
[ENA]
¢þ
>WENV180906971
ODPV01001582
[ODPV] human metagenome; G_DNA_Buccal mucosa
81
7
-
Val
TAC
[ENA]
¢þ
>WENV180906991
ODPV01008646
[ODPV] human metagenome; G_DNA_Buccal mucosa
92
167
+
Thr
CGT
[ENA]
¢þ
>WENV180906993
ODPV01009597
[ODPV] human metagenome; G_DNA_Buccal mucosa
101
25
-
fMet
CAT
[ENA]
¢þ
>WENV180906979
ODPV01002634
[ODPV] human metagenome; G_DNA_Buccal mucosa
101
28
-
Arg
ACG
[ENA]
¢þ
>WENV180906990
ODPV01008183
[ODPV] human metagenome; G_DNA_Buccal mucosa
110
34
-
Arg
ACG
[ENA]
¢þ
>WENV180906995
ODPV01009834
[ODPV] human metagenome; G_DNA_Buccal mucosa
118
190
+
Cys
GCA
[ENA]
¢þ
>WENV180906957
ODPV01000726
[ODPV] human metagenome; G_DNA_Buccal mucosa
120
45
-
Glu
TTC
[ENA]
¢þ
>WENV180906987
ODPV01006723
[ODPV] human metagenome; G_DNA_Buccal mucosa
122
197
+
Val
TAC
[ENA]
¢þ
>WENV180906966
ODPV01001346
[ODPV] human metagenome; G_DNA_Buccal mucosa
129
58
-
Cys
GCA
[ENA]
¢þ
>WENV180906934
ODPV01000023
[ODPV] human metagenome; G_DNA_Buccal mucosa
135
207
+
Asn
GTT
[ENA]
¢þ
>WENV180906988
ODPV01007775
[ODPV] human metagenome; G_DNA_Buccal mucosa
138
64
-
Pro
GGG
[ENA]
¢þ
>WENV180906992
ODPV01008728
[ODPV] human metagenome; G_DNA_Buccal mucosa
146
73
-
Gly
TCC
[ENA]
¢þ
>WENV180906973
ODPV01001721
[ODPV] human metagenome; G_DNA_Buccal mucosa
173
247
+
Ala
TGC
[ENA]
¢þ
>WENV180906978
ODPV01002602
[ODPV] human metagenome; G_DNA_Buccal mucosa
178
253
+
Thr
TGT
[ENA]
¢þ
>WENV180906985
ODPV01006503
[ODPV] human metagenome; G_DNA_Buccal mucosa
180
88
-
Ser
TGA
[ENA]
¢þ
>WENV180906949
ODPV01000429
[ODPV] human metagenome; G_DNA_Buccal mucosa
196
122
-
Ala
TGC
[ENA]
¢þ
>WENV180906989
ODPV01008183
[ODPV] human metagenome; G_DNA_Buccal mucosa
211
123
-
Leu
TAA
[ENA]
¢þ
>WENV180906959
ODPV01001032
[ODPV] human metagenome; G_DNA_Buccal mucosa
217
290
+
Trp
CCA
[ENA]
¢þ
>WENV180906983
ODPV01003947
[ODPV] human metagenome; G_DNA_Buccal mucosa
226
142
-
Leu
TAG
[ENA]
¢þ
>WENV180906965
ODPV01001346
[ODPV] human metagenome; G_DNA_Buccal mucosa
230
157
-
Gly
GCC
[ENA]
¢þ
>WENV180906981
ODPV01003389
[ODPV] human metagenome; G_DNA_Buccal mucosa
231
303
+
Thr
GGT
[ENA]
¢þ
>WENV180906982
ODPV01003907
[ODPV] human metagenome; G_DNA_Buccal mucosa
234
310
+
Ile2
CAT
[ENA]
¢þ
>WENV180906968
ODPV01001403
[ODPV] human metagenome; G_DNA_Buccal mucosa
244
169
-
Glu
CTC
[ENA]
¢þ
>WENV180906969
ODPV01001408
[ODPV] human metagenome; G_DNA_Buccal mucosa
263
346
+
Leu
CAG
[ENA]
¢þ
>WENV180906956
ODPV01000726
[ODPV] human metagenome; G_DNA_Buccal mucosa
274
199
-
Ala
GGC
[ENA]
¢þ
>WENV180906977
ODPV01002487
[ODPV] human metagenome; G_DNA_Buccal mucosa
279
364
+
Ser
TGA
[ENA]
¢þ
>WENV180906980
ODPV01002917
[ODPV] human metagenome; G_DNA_Buccal mucosa
296
370
+
Lys
CTT
[ENA]
¢þ
>WENV180906955
ODPV01000693
[ODPV] human metagenome; G_DNA_Buccal mucosa
315
239
-
Pro
CGG
[ENA]
¢þ
>WENV180906975
ODPV01001853
[ODPV] human metagenome; G_DNA_Buccal mucosa
334
249
-
Ser
TGA
[ENA]
¢þ
>WENV180906962
ODPV01001199
[ODPV] human metagenome; G_DNA_Buccal mucosa
358
431
+
Thr
GGT
[ENA]
¢þ
>WENV180906964
ODPV01001268
[ODPV] human metagenome; G_DNA_Buccal mucosa
366
441
+
Trp
CCA
[ENA]
¢þ
>WENV180906939
ODPV01000061
[ODPV] human metagenome; G_DNA_Buccal mucosa
381
311
-
Met
CAT
[ENA]
¢þ
>WENV180906944
ODPV01000316
[ODPV] human metagenome; G_DNA_Buccal mucosa
384
458
+
Asp
GTC
[ENA]
¢þ
>WENV180906974
ODPV01001853
[ODPV] human metagenome; G_DNA_Buccal mucosa
440
358
-
Tyr
GTA
[ENA]
¢þ
>WENV180906967
ODPV01001403
[ODPV] human metagenome; G_DNA_Buccal mucosa
452
380
-
Gln
CTG
[ENA]
¢þ
>WENV180906958
ODPV01001011
[ODPV] human metagenome; G_DNA_Buccal mucosa
469
393
-
fMet
CAT
[ENA]
¢þ
>WENV180906960
ODPV01001097
[ODPV] human metagenome; G_DNA_Buccal mucosa
484
557
+
Asn
GTT
[ENA]
¢þ
>WENV180906972
ODPV01001663
[ODPV] human metagenome; G_DNA_Buccal mucosa
492
407
-
Ser
GGA
[ENA]
¢þ
>WENV180906963
ODPV01001199
[ODPV] human metagenome; G_DNA_Buccal mucosa
496
570
+
Met
CAT
[ENA]
¢þ
>WENV180906945
ODPV01000316
[ODPV] human metagenome; G_DNA_Buccal mucosa
519
594
+
Phe
GAA
[ENA]
¢þ
>WENV180906947
ODPV01000353
[ODPV] human metagenome; G_DNA_Buccal mucosa
529
604
+
Lys
TTT
[ENA]
¢þ
>WENV180906970
ODPV01001520
[ODPV] human metagenome; G_DNA_Buccal mucosa
545
470
-
Asn
GTT
[ENA]
¢þ
>WENV180906937
ODPV01000059
[ODPV] human metagenome; G_DNA_Buccal mucosa
548
618
+
Val
TAC
[ENA]
¢þ
>WENV180906954
ODPV01000587
[ODPV] human metagenome; G_DNA_Buccal mucosa
555
481
-
Lys
TTT
[ENA]
¢þ
>WENV180906952
ODPV01000538
[ODPV] human metagenome; G_DNA_Buccal mucosa
632
715
+
Leu
TAG
[ENA]
¢þ
>WENV180906951
ODPV01000494
[ODPV] human metagenome; G_DNA_Buccal mucosa
709
782
+
Ala
GGC
[ENA]
¢þ
>WENV180906953
ODPV01000553
[ODPV] human metagenome; G_DNA_Buccal mucosa
815
890
+
His
GTG
[ENA]
¢þ
>WENV180906942
ODPV01000151
[ODPV] human metagenome; G_DNA_Buccal mucosa
941
1016
+
Arg
TCT
[ENA]
¢þ
>WENV180906950
ODPV01000482
[ODPV] human metagenome; G_DNA_Buccal mucosa
1069
996
-
Arg
CCT
[ENA]
¢þ
>WENV180906948
ODPV01000353
[ODPV] human metagenome; G_DNA_Buccal mucosa
1209
1136
-
Thr
TGT
[ENA]
¢þ
>WENV180906946
ODPV01000318
[ODPV] human metagenome; G_DNA_Buccal mucosa
1263
1188
-
Ala
TGC
[ENA]
¢þ
>WENV180906943
ODPV01000219
[ODPV] human metagenome; G_DNA_Buccal mucosa
1359
1284
-
Thr
CGT
[ENA]
¢þ
>WENV180906938
ODPV01000061
[ODPV] human metagenome; G_DNA_Buccal mucosa
1607
1680
+
His
GTG
[ENA]
¢þ
>WENV180906935
ODPV01000038
[ODPV] human metagenome; G_DNA_Buccal mucosa
1632
1716
+
Leu
TAG
[ENA]
¢þ
>WENV180906941
ODPV01000143
[ODPV] human metagenome; G_DNA_Buccal mucosa
1643
1570
-
Gly
TCC
[ENA]
¢þ
>WENV180906940
ODPV01000063
[ODPV] human metagenome; G_DNA_Buccal mucosa
1966
2053
+
Ser
CGA
[ENA]
¢þ
>WENV180906936
ODPV01000038
[ODPV] human metagenome; G_DNA_Buccal mucosa
2093
2168
+
Arg
TCG
[ENA]
¢þ
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
View ClustalW result
BACK