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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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|
Keyword
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BLAST
|
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HOW TO USE
tRNA gene List
[ODQS] human metagenome; G_DNA_Posterior fornix
HIT:
62 sequence(s).
Download Sequence
View ClustalW result
The reliable tRNA genes
All candidate tRNA genes
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
>WENV180909937
ODQS01006125
[ODQS] human metagenome; G_DNA_Posterior fornix
31
104
+
Val
CAC
[ENA]
¢þ
>WENV180909947
ODQS01009834
[ODQS] human metagenome; G_DNA_Posterior fornix
33
106
+
Gln
TTG
[ENA]
¢þ
>WENV180909929
ODQS01002415
[ODQS] human metagenome; G_DNA_Posterior fornix
36
108
+
Val
GAC
[ENA]
¢þ
>WENV180909939
ODQS01006723
[ODQS] human metagenome; G_DNA_Posterior fornix
43
117
+
Glu
TTC
[ENA]
¢þ
>WENV180909914
ODQS01001199
[ODQS] human metagenome; G_DNA_Posterior fornix
75
157
+
Tyr
GTA
[ENA]
¢þ
>WENV180909924
ODQS01001582
[ODQS] human metagenome; G_DNA_Posterior fornix
81
7
-
Val
TAC
[ENA]
¢þ
>WENV180909944
ODQS01008646
[ODQS] human metagenome; G_DNA_Posterior fornix
92
167
+
Thr
CGT
[ENA]
¢þ
>WENV180909946
ODQS01009597
[ODQS] human metagenome; G_DNA_Posterior fornix
101
25
-
fMet
CAT
[ENA]
¢þ
>WENV180909932
ODQS01002634
[ODQS] human metagenome; G_DNA_Posterior fornix
101
28
-
Arg
ACG
[ENA]
¢þ
>WENV180909943
ODQS01008183
[ODQS] human metagenome; G_DNA_Posterior fornix
110
34
-
Arg
ACG
[ENA]
¢þ
>WENV180909948
ODQS01009834
[ODQS] human metagenome; G_DNA_Posterior fornix
118
190
+
Cys
GCA
[ENA]
¢þ
>WENV180909910
ODQS01000726
[ODQS] human metagenome; G_DNA_Posterior fornix
120
45
-
Glu
TTC
[ENA]
¢þ
>WENV180909940
ODQS01006723
[ODQS] human metagenome; G_DNA_Posterior fornix
122
197
+
Val
TAC
[ENA]
¢þ
>WENV180909919
ODQS01001346
[ODQS] human metagenome; G_DNA_Posterior fornix
129
58
-
Cys
GCA
[ENA]
¢þ
>WENV180909887
ODQS01000023
[ODQS] human metagenome; G_DNA_Posterior fornix
135
207
+
Asn
GTT
[ENA]
¢þ
>WENV180909941
ODQS01007775
[ODQS] human metagenome; G_DNA_Posterior fornix
138
64
-
Pro
GGG
[ENA]
¢þ
>WENV180909945
ODQS01008728
[ODQS] human metagenome; G_DNA_Posterior fornix
146
73
-
Gly
TCC
[ENA]
¢þ
>WENV180909926
ODQS01001721
[ODQS] human metagenome; G_DNA_Posterior fornix
173
247
+
Ala
TGC
[ENA]
¢þ
>WENV180909931
ODQS01002602
[ODQS] human metagenome; G_DNA_Posterior fornix
178
253
+
Thr
TGT
[ENA]
¢þ
>WENV180909938
ODQS01006503
[ODQS] human metagenome; G_DNA_Posterior fornix
180
88
-
Ser
TGA
[ENA]
¢þ
>WENV180909902
ODQS01000429
[ODQS] human metagenome; G_DNA_Posterior fornix
196
122
-
Ala
TGC
[ENA]
¢þ
>WENV180909942
ODQS01008183
[ODQS] human metagenome; G_DNA_Posterior fornix
211
123
-
Leu
TAA
[ENA]
¢þ
>WENV180909912
ODQS01001032
[ODQS] human metagenome; G_DNA_Posterior fornix
217
290
+
Trp
CCA
[ENA]
¢þ
>WENV180909936
ODQS01003947
[ODQS] human metagenome; G_DNA_Posterior fornix
226
142
-
Leu
TAG
[ENA]
¢þ
>WENV180909918
ODQS01001346
[ODQS] human metagenome; G_DNA_Posterior fornix
230
157
-
Gly
GCC
[ENA]
¢þ
>WENV180909934
ODQS01003389
[ODQS] human metagenome; G_DNA_Posterior fornix
231
303
+
Thr
GGT
[ENA]
¢þ
>WENV180909935
ODQS01003907
[ODQS] human metagenome; G_DNA_Posterior fornix
234
310
+
Ile2
CAT
[ENA]
¢þ
>WENV180909921
ODQS01001403
[ODQS] human metagenome; G_DNA_Posterior fornix
244
169
-
Glu
CTC
[ENA]
¢þ
>WENV180909922
ODQS01001408
[ODQS] human metagenome; G_DNA_Posterior fornix
263
346
+
Leu
CAG
[ENA]
¢þ
>WENV180909909
ODQS01000726
[ODQS] human metagenome; G_DNA_Posterior fornix
274
199
-
Ala
GGC
[ENA]
¢þ
>WENV180909930
ODQS01002487
[ODQS] human metagenome; G_DNA_Posterior fornix
279
364
+
Ser
TGA
[ENA]
¢þ
>WENV180909933
ODQS01002917
[ODQS] human metagenome; G_DNA_Posterior fornix
296
370
+
Lys
CTT
[ENA]
¢þ
>WENV180909908
ODQS01000693
[ODQS] human metagenome; G_DNA_Posterior fornix
315
239
-
Pro
CGG
[ENA]
¢þ
>WENV180909928
ODQS01001853
[ODQS] human metagenome; G_DNA_Posterior fornix
334
249
-
Ser
TGA
[ENA]
¢þ
>WENV180909915
ODQS01001199
[ODQS] human metagenome; G_DNA_Posterior fornix
358
431
+
Thr
GGT
[ENA]
¢þ
>WENV180909917
ODQS01001268
[ODQS] human metagenome; G_DNA_Posterior fornix
366
441
+
Trp
CCA
[ENA]
¢þ
>WENV180909892
ODQS01000061
[ODQS] human metagenome; G_DNA_Posterior fornix
381
311
-
Met
CAT
[ENA]
¢þ
>WENV180909897
ODQS01000316
[ODQS] human metagenome; G_DNA_Posterior fornix
384
458
+
Asp
GTC
[ENA]
¢þ
>WENV180909927
ODQS01001853
[ODQS] human metagenome; G_DNA_Posterior fornix
440
358
-
Tyr
GTA
[ENA]
¢þ
>WENV180909920
ODQS01001403
[ODQS] human metagenome; G_DNA_Posterior fornix
452
380
-
Gln
CTG
[ENA]
¢þ
>WENV180909911
ODQS01001011
[ODQS] human metagenome; G_DNA_Posterior fornix
469
393
-
fMet
CAT
[ENA]
¢þ
>WENV180909913
ODQS01001097
[ODQS] human metagenome; G_DNA_Posterior fornix
484
557
+
Asn
GTT
[ENA]
¢þ
>WENV180909925
ODQS01001663
[ODQS] human metagenome; G_DNA_Posterior fornix
492
407
-
Ser
GGA
[ENA]
¢þ
>WENV180909916
ODQS01001199
[ODQS] human metagenome; G_DNA_Posterior fornix
496
570
+
Met
CAT
[ENA]
¢þ
>WENV180909898
ODQS01000316
[ODQS] human metagenome; G_DNA_Posterior fornix
519
594
+
Phe
GAA
[ENA]
¢þ
>WENV180909900
ODQS01000353
[ODQS] human metagenome; G_DNA_Posterior fornix
529
604
+
Lys
TTT
[ENA]
¢þ
>WENV180909923
ODQS01001520
[ODQS] human metagenome; G_DNA_Posterior fornix
545
470
-
Asn
GTT
[ENA]
¢þ
>WENV180909890
ODQS01000059
[ODQS] human metagenome; G_DNA_Posterior fornix
548
618
+
Val
TAC
[ENA]
¢þ
>WENV180909907
ODQS01000587
[ODQS] human metagenome; G_DNA_Posterior fornix
555
481
-
Lys
TTT
[ENA]
¢þ
>WENV180909905
ODQS01000538
[ODQS] human metagenome; G_DNA_Posterior fornix
632
715
+
Leu
TAG
[ENA]
¢þ
>WENV180909904
ODQS01000494
[ODQS] human metagenome; G_DNA_Posterior fornix
709
782
+
Ala
GGC
[ENA]
¢þ
>WENV180909906
ODQS01000553
[ODQS] human metagenome; G_DNA_Posterior fornix
815
890
+
His
GTG
[ENA]
¢þ
>WENV180909895
ODQS01000151
[ODQS] human metagenome; G_DNA_Posterior fornix
941
1016
+
Arg
TCT
[ENA]
¢þ
>WENV180909903
ODQS01000482
[ODQS] human metagenome; G_DNA_Posterior fornix
1069
996
-
Arg
CCT
[ENA]
¢þ
>WENV180909901
ODQS01000353
[ODQS] human metagenome; G_DNA_Posterior fornix
1209
1136
-
Thr
TGT
[ENA]
¢þ
>WENV180909899
ODQS01000318
[ODQS] human metagenome; G_DNA_Posterior fornix
1263
1188
-
Ala
TGC
[ENA]
¢þ
>WENV180909896
ODQS01000219
[ODQS] human metagenome; G_DNA_Posterior fornix
1359
1284
-
Thr
CGT
[ENA]
¢þ
>WENV180909891
ODQS01000061
[ODQS] human metagenome; G_DNA_Posterior fornix
1607
1680
+
His
GTG
[ENA]
¢þ
>WENV180909888
ODQS01000038
[ODQS] human metagenome; G_DNA_Posterior fornix
1632
1716
+
Leu
TAG
[ENA]
¢þ
>WENV180909894
ODQS01000143
[ODQS] human metagenome; G_DNA_Posterior fornix
1643
1570
-
Gly
TCC
[ENA]
¢þ
>WENV180909893
ODQS01000063
[ODQS] human metagenome; G_DNA_Posterior fornix
1966
2053
+
Ser
CGA
[ENA]
¢þ
>WENV180909889
ODQS01000038
[ODQS] human metagenome; G_DNA_Posterior fornix
2093
2168
+
Arg
TCG
[ENA]
¢þ
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
View ClustalW result
BACK