This is the navigation skips to jump to main contents
Jump to main contents.
tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
Top
|
Keyword
|
BLAST
|
Download
|
HOW TO USE
tRNA gene List
[ODQV] human metagenome; G_DNA_Anterior nares
HIT:
62 sequence(s).
Download Sequence
View ClustalW result
The reliable tRNA genes
All candidate tRNA genes
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
>WENV180910123
ODQV01006125
[ODQV] human metagenome; G_DNA_Anterior nares
31
104
+
Val
CAC
[ENA]
¢þ
>WENV180910133
ODQV01009834
[ODQV] human metagenome; G_DNA_Anterior nares
33
106
+
Gln
TTG
[ENA]
¢þ
>WENV180910115
ODQV01002415
[ODQV] human metagenome; G_DNA_Anterior nares
36
108
+
Val
GAC
[ENA]
¢þ
>WENV180910125
ODQV01006723
[ODQV] human metagenome; G_DNA_Anterior nares
43
117
+
Glu
TTC
[ENA]
¢þ
>WENV180910100
ODQV01001199
[ODQV] human metagenome; G_DNA_Anterior nares
75
157
+
Tyr
GTA
[ENA]
¢þ
>WENV180910110
ODQV01001582
[ODQV] human metagenome; G_DNA_Anterior nares
81
7
-
Val
TAC
[ENA]
¢þ
>WENV180910130
ODQV01008646
[ODQV] human metagenome; G_DNA_Anterior nares
92
167
+
Thr
CGT
[ENA]
¢þ
>WENV180910132
ODQV01009597
[ODQV] human metagenome; G_DNA_Anterior nares
101
25
-
fMet
CAT
[ENA]
¢þ
>WENV180910118
ODQV01002634
[ODQV] human metagenome; G_DNA_Anterior nares
101
28
-
Arg
ACG
[ENA]
¢þ
>WENV180910129
ODQV01008183
[ODQV] human metagenome; G_DNA_Anterior nares
110
34
-
Arg
ACG
[ENA]
¢þ
>WENV180910134
ODQV01009834
[ODQV] human metagenome; G_DNA_Anterior nares
118
190
+
Cys
GCA
[ENA]
¢þ
>WENV180910096
ODQV01000726
[ODQV] human metagenome; G_DNA_Anterior nares
120
45
-
Glu
TTC
[ENA]
¢þ
>WENV180910126
ODQV01006723
[ODQV] human metagenome; G_DNA_Anterior nares
122
197
+
Val
TAC
[ENA]
¢þ
>WENV180910105
ODQV01001346
[ODQV] human metagenome; G_DNA_Anterior nares
129
58
-
Cys
GCA
[ENA]
¢þ
>WENV180910073
ODQV01000023
[ODQV] human metagenome; G_DNA_Anterior nares
135
207
+
Asn
GTT
[ENA]
¢þ
>WENV180910127
ODQV01007775
[ODQV] human metagenome; G_DNA_Anterior nares
138
64
-
Pro
GGG
[ENA]
¢þ
>WENV180910131
ODQV01008728
[ODQV] human metagenome; G_DNA_Anterior nares
146
73
-
Gly
TCC
[ENA]
¢þ
>WENV180910112
ODQV01001721
[ODQV] human metagenome; G_DNA_Anterior nares
173
247
+
Ala
TGC
[ENA]
¢þ
>WENV180910117
ODQV01002602
[ODQV] human metagenome; G_DNA_Anterior nares
178
253
+
Thr
TGT
[ENA]
¢þ
>WENV180910124
ODQV01006503
[ODQV] human metagenome; G_DNA_Anterior nares
180
88
-
Ser
TGA
[ENA]
¢þ
>WENV180910088
ODQV01000429
[ODQV] human metagenome; G_DNA_Anterior nares
196
122
-
Ala
TGC
[ENA]
¢þ
>WENV180910128
ODQV01008183
[ODQV] human metagenome; G_DNA_Anterior nares
211
123
-
Leu
TAA
[ENA]
¢þ
>WENV180910098
ODQV01001032
[ODQV] human metagenome; G_DNA_Anterior nares
217
290
+
Trp
CCA
[ENA]
¢þ
>WENV180910122
ODQV01003947
[ODQV] human metagenome; G_DNA_Anterior nares
226
142
-
Leu
TAG
[ENA]
¢þ
>WENV180910104
ODQV01001346
[ODQV] human metagenome; G_DNA_Anterior nares
230
157
-
Gly
GCC
[ENA]
¢þ
>WENV180910120
ODQV01003389
[ODQV] human metagenome; G_DNA_Anterior nares
231
303
+
Thr
GGT
[ENA]
¢þ
>WENV180910121
ODQV01003907
[ODQV] human metagenome; G_DNA_Anterior nares
234
310
+
Ile2
CAT
[ENA]
¢þ
>WENV180910107
ODQV01001403
[ODQV] human metagenome; G_DNA_Anterior nares
244
169
-
Glu
CTC
[ENA]
¢þ
>WENV180910108
ODQV01001408
[ODQV] human metagenome; G_DNA_Anterior nares
263
346
+
Leu
CAG
[ENA]
¢þ
>WENV180910095
ODQV01000726
[ODQV] human metagenome; G_DNA_Anterior nares
274
199
-
Ala
GGC
[ENA]
¢þ
>WENV180910116
ODQV01002487
[ODQV] human metagenome; G_DNA_Anterior nares
279
364
+
Ser
TGA
[ENA]
¢þ
>WENV180910119
ODQV01002917
[ODQV] human metagenome; G_DNA_Anterior nares
296
370
+
Lys
CTT
[ENA]
¢þ
>WENV180910094
ODQV01000693
[ODQV] human metagenome; G_DNA_Anterior nares
315
239
-
Pro
CGG
[ENA]
¢þ
>WENV180910114
ODQV01001853
[ODQV] human metagenome; G_DNA_Anterior nares
334
249
-
Ser
TGA
[ENA]
¢þ
>WENV180910101
ODQV01001199
[ODQV] human metagenome; G_DNA_Anterior nares
358
431
+
Thr
GGT
[ENA]
¢þ
>WENV180910103
ODQV01001268
[ODQV] human metagenome; G_DNA_Anterior nares
366
441
+
Trp
CCA
[ENA]
¢þ
>WENV180910078
ODQV01000061
[ODQV] human metagenome; G_DNA_Anterior nares
381
311
-
Met
CAT
[ENA]
¢þ
>WENV180910083
ODQV01000316
[ODQV] human metagenome; G_DNA_Anterior nares
384
458
+
Asp
GTC
[ENA]
¢þ
>WENV180910113
ODQV01001853
[ODQV] human metagenome; G_DNA_Anterior nares
440
358
-
Tyr
GTA
[ENA]
¢þ
>WENV180910106
ODQV01001403
[ODQV] human metagenome; G_DNA_Anterior nares
452
380
-
Gln
CTG
[ENA]
¢þ
>WENV180910097
ODQV01001011
[ODQV] human metagenome; G_DNA_Anterior nares
469
393
-
fMet
CAT
[ENA]
¢þ
>WENV180910099
ODQV01001097
[ODQV] human metagenome; G_DNA_Anterior nares
484
557
+
Asn
GTT
[ENA]
¢þ
>WENV180910111
ODQV01001663
[ODQV] human metagenome; G_DNA_Anterior nares
492
407
-
Ser
GGA
[ENA]
¢þ
>WENV180910102
ODQV01001199
[ODQV] human metagenome; G_DNA_Anterior nares
496
570
+
Met
CAT
[ENA]
¢þ
>WENV180910084
ODQV01000316
[ODQV] human metagenome; G_DNA_Anterior nares
519
594
+
Phe
GAA
[ENA]
¢þ
>WENV180910086
ODQV01000353
[ODQV] human metagenome; G_DNA_Anterior nares
529
604
+
Lys
TTT
[ENA]
¢þ
>WENV180910109
ODQV01001520
[ODQV] human metagenome; G_DNA_Anterior nares
545
470
-
Asn
GTT
[ENA]
¢þ
>WENV180910076
ODQV01000059
[ODQV] human metagenome; G_DNA_Anterior nares
548
618
+
Val
TAC
[ENA]
¢þ
>WENV180910093
ODQV01000587
[ODQV] human metagenome; G_DNA_Anterior nares
555
481
-
Lys
TTT
[ENA]
¢þ
>WENV180910091
ODQV01000538
[ODQV] human metagenome; G_DNA_Anterior nares
632
715
+
Leu
TAG
[ENA]
¢þ
>WENV180910090
ODQV01000494
[ODQV] human metagenome; G_DNA_Anterior nares
709
782
+
Ala
GGC
[ENA]
¢þ
>WENV180910092
ODQV01000553
[ODQV] human metagenome; G_DNA_Anterior nares
815
890
+
His
GTG
[ENA]
¢þ
>WENV180910081
ODQV01000151
[ODQV] human metagenome; G_DNA_Anterior nares
941
1016
+
Arg
TCT
[ENA]
¢þ
>WENV180910089
ODQV01000482
[ODQV] human metagenome; G_DNA_Anterior nares
1069
996
-
Arg
CCT
[ENA]
¢þ
>WENV180910087
ODQV01000353
[ODQV] human metagenome; G_DNA_Anterior nares
1209
1136
-
Thr
TGT
[ENA]
¢þ
>WENV180910085
ODQV01000318
[ODQV] human metagenome; G_DNA_Anterior nares
1263
1188
-
Ala
TGC
[ENA]
¢þ
>WENV180910082
ODQV01000219
[ODQV] human metagenome; G_DNA_Anterior nares
1359
1284
-
Thr
CGT
[ENA]
¢þ
>WENV180910077
ODQV01000061
[ODQV] human metagenome; G_DNA_Anterior nares
1607
1680
+
His
GTG
[ENA]
¢þ
>WENV180910074
ODQV01000038
[ODQV] human metagenome; G_DNA_Anterior nares
1632
1716
+
Leu
TAG
[ENA]
¢þ
>WENV180910080
ODQV01000143
[ODQV] human metagenome; G_DNA_Anterior nares
1643
1570
-
Gly
TCC
[ENA]
¢þ
>WENV180910079
ODQV01000063
[ODQV] human metagenome; G_DNA_Anterior nares
1966
2053
+
Ser
CGA
[ENA]
¢þ
>WENV180910075
ODQV01000038
[ODQV] human metagenome; G_DNA_Anterior nares
2093
2168
+
Arg
TCG
[ENA]
¢þ
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
View ClustalW result
BACK