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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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HOW TO USE
tRNA gene List
[ODRW] human metagenome; G_DNA_Buccal mucosa
HIT:
62 sequence(s).
Download Sequence
View ClustalW result
The reliable tRNA genes
All candidate tRNA genes
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
>WENV180911797
ODRW01006125
[ODRW] human metagenome; G_DNA_Buccal mucosa
31
104
+
Val
CAC
[ENA]
¢þ
>WENV180911807
ODRW01009834
[ODRW] human metagenome; G_DNA_Buccal mucosa
33
106
+
Gln
TTG
[ENA]
¢þ
>WENV180911789
ODRW01002415
[ODRW] human metagenome; G_DNA_Buccal mucosa
36
108
+
Val
GAC
[ENA]
¢þ
>WENV180911799
ODRW01006723
[ODRW] human metagenome; G_DNA_Buccal mucosa
43
117
+
Glu
TTC
[ENA]
¢þ
>WENV180911774
ODRW01001199
[ODRW] human metagenome; G_DNA_Buccal mucosa
75
157
+
Tyr
GTA
[ENA]
¢þ
>WENV180911784
ODRW01001582
[ODRW] human metagenome; G_DNA_Buccal mucosa
81
7
-
Val
TAC
[ENA]
¢þ
>WENV180911804
ODRW01008646
[ODRW] human metagenome; G_DNA_Buccal mucosa
92
167
+
Thr
CGT
[ENA]
¢þ
>WENV180911806
ODRW01009597
[ODRW] human metagenome; G_DNA_Buccal mucosa
101
25
-
fMet
CAT
[ENA]
¢þ
>WENV180911792
ODRW01002634
[ODRW] human metagenome; G_DNA_Buccal mucosa
101
28
-
Arg
ACG
[ENA]
¢þ
>WENV180911803
ODRW01008183
[ODRW] human metagenome; G_DNA_Buccal mucosa
110
34
-
Arg
ACG
[ENA]
¢þ
>WENV180911808
ODRW01009834
[ODRW] human metagenome; G_DNA_Buccal mucosa
118
190
+
Cys
GCA
[ENA]
¢þ
>WENV180911770
ODRW01000726
[ODRW] human metagenome; G_DNA_Buccal mucosa
120
45
-
Glu
TTC
[ENA]
¢þ
>WENV180911800
ODRW01006723
[ODRW] human metagenome; G_DNA_Buccal mucosa
122
197
+
Val
TAC
[ENA]
¢þ
>WENV180911779
ODRW01001346
[ODRW] human metagenome; G_DNA_Buccal mucosa
129
58
-
Cys
GCA
[ENA]
¢þ
>WENV180911747
ODRW01000023
[ODRW] human metagenome; G_DNA_Buccal mucosa
135
207
+
Asn
GTT
[ENA]
¢þ
>WENV180911801
ODRW01007775
[ODRW] human metagenome; G_DNA_Buccal mucosa
138
64
-
Pro
GGG
[ENA]
¢þ
>WENV180911805
ODRW01008728
[ODRW] human metagenome; G_DNA_Buccal mucosa
146
73
-
Gly
TCC
[ENA]
¢þ
>WENV180911786
ODRW01001721
[ODRW] human metagenome; G_DNA_Buccal mucosa
173
247
+
Ala
TGC
[ENA]
¢þ
>WENV180911791
ODRW01002602
[ODRW] human metagenome; G_DNA_Buccal mucosa
178
253
+
Thr
TGT
[ENA]
¢þ
>WENV180911798
ODRW01006503
[ODRW] human metagenome; G_DNA_Buccal mucosa
180
88
-
Ser
TGA
[ENA]
¢þ
>WENV180911762
ODRW01000429
[ODRW] human metagenome; G_DNA_Buccal mucosa
196
122
-
Ala
TGC
[ENA]
¢þ
>WENV180911802
ODRW01008183
[ODRW] human metagenome; G_DNA_Buccal mucosa
211
123
-
Leu
TAA
[ENA]
¢þ
>WENV180911772
ODRW01001032
[ODRW] human metagenome; G_DNA_Buccal mucosa
217
290
+
Trp
CCA
[ENA]
¢þ
>WENV180911796
ODRW01003947
[ODRW] human metagenome; G_DNA_Buccal mucosa
226
142
-
Leu
TAG
[ENA]
¢þ
>WENV180911778
ODRW01001346
[ODRW] human metagenome; G_DNA_Buccal mucosa
230
157
-
Gly
GCC
[ENA]
¢þ
>WENV180911794
ODRW01003389
[ODRW] human metagenome; G_DNA_Buccal mucosa
231
303
+
Thr
GGT
[ENA]
¢þ
>WENV180911795
ODRW01003907
[ODRW] human metagenome; G_DNA_Buccal mucosa
234
310
+
Ile2
CAT
[ENA]
¢þ
>WENV180911781
ODRW01001403
[ODRW] human metagenome; G_DNA_Buccal mucosa
244
169
-
Glu
CTC
[ENA]
¢þ
>WENV180911782
ODRW01001408
[ODRW] human metagenome; G_DNA_Buccal mucosa
263
346
+
Leu
CAG
[ENA]
¢þ
>WENV180911769
ODRW01000726
[ODRW] human metagenome; G_DNA_Buccal mucosa
274
199
-
Ala
GGC
[ENA]
¢þ
>WENV180911790
ODRW01002487
[ODRW] human metagenome; G_DNA_Buccal mucosa
279
364
+
Ser
TGA
[ENA]
¢þ
>WENV180911793
ODRW01002917
[ODRW] human metagenome; G_DNA_Buccal mucosa
296
370
+
Lys
CTT
[ENA]
¢þ
>WENV180911768
ODRW01000693
[ODRW] human metagenome; G_DNA_Buccal mucosa
315
239
-
Pro
CGG
[ENA]
¢þ
>WENV180911788
ODRW01001853
[ODRW] human metagenome; G_DNA_Buccal mucosa
334
249
-
Ser
TGA
[ENA]
¢þ
>WENV180911775
ODRW01001199
[ODRW] human metagenome; G_DNA_Buccal mucosa
358
431
+
Thr
GGT
[ENA]
¢þ
>WENV180911777
ODRW01001268
[ODRW] human metagenome; G_DNA_Buccal mucosa
366
441
+
Trp
CCA
[ENA]
¢þ
>WENV180911752
ODRW01000061
[ODRW] human metagenome; G_DNA_Buccal mucosa
381
311
-
Met
CAT
[ENA]
¢þ
>WENV180911757
ODRW01000316
[ODRW] human metagenome; G_DNA_Buccal mucosa
384
458
+
Asp
GTC
[ENA]
¢þ
>WENV180911787
ODRW01001853
[ODRW] human metagenome; G_DNA_Buccal mucosa
440
358
-
Tyr
GTA
[ENA]
¢þ
>WENV180911780
ODRW01001403
[ODRW] human metagenome; G_DNA_Buccal mucosa
452
380
-
Gln
CTG
[ENA]
¢þ
>WENV180911771
ODRW01001011
[ODRW] human metagenome; G_DNA_Buccal mucosa
469
393
-
fMet
CAT
[ENA]
¢þ
>WENV180911773
ODRW01001097
[ODRW] human metagenome; G_DNA_Buccal mucosa
484
557
+
Asn
GTT
[ENA]
¢þ
>WENV180911785
ODRW01001663
[ODRW] human metagenome; G_DNA_Buccal mucosa
492
407
-
Ser
GGA
[ENA]
¢þ
>WENV180911776
ODRW01001199
[ODRW] human metagenome; G_DNA_Buccal mucosa
496
570
+
Met
CAT
[ENA]
¢þ
>WENV180911758
ODRW01000316
[ODRW] human metagenome; G_DNA_Buccal mucosa
519
594
+
Phe
GAA
[ENA]
¢þ
>WENV180911760
ODRW01000353
[ODRW] human metagenome; G_DNA_Buccal mucosa
529
604
+
Lys
TTT
[ENA]
¢þ
>WENV180911783
ODRW01001520
[ODRW] human metagenome; G_DNA_Buccal mucosa
545
470
-
Asn
GTT
[ENA]
¢þ
>WENV180911750
ODRW01000059
[ODRW] human metagenome; G_DNA_Buccal mucosa
548
618
+
Val
TAC
[ENA]
¢þ
>WENV180911767
ODRW01000587
[ODRW] human metagenome; G_DNA_Buccal mucosa
555
481
-
Lys
TTT
[ENA]
¢þ
>WENV180911765
ODRW01000538
[ODRW] human metagenome; G_DNA_Buccal mucosa
632
715
+
Leu
TAG
[ENA]
¢þ
>WENV180911764
ODRW01000494
[ODRW] human metagenome; G_DNA_Buccal mucosa
709
782
+
Ala
GGC
[ENA]
¢þ
>WENV180911766
ODRW01000553
[ODRW] human metagenome; G_DNA_Buccal mucosa
815
890
+
His
GTG
[ENA]
¢þ
>WENV180911755
ODRW01000151
[ODRW] human metagenome; G_DNA_Buccal mucosa
941
1016
+
Arg
TCT
[ENA]
¢þ
>WENV180911763
ODRW01000482
[ODRW] human metagenome; G_DNA_Buccal mucosa
1069
996
-
Arg
CCT
[ENA]
¢þ
>WENV180911761
ODRW01000353
[ODRW] human metagenome; G_DNA_Buccal mucosa
1209
1136
-
Thr
TGT
[ENA]
¢þ
>WENV180911759
ODRW01000318
[ODRW] human metagenome; G_DNA_Buccal mucosa
1263
1188
-
Ala
TGC
[ENA]
¢þ
>WENV180911756
ODRW01000219
[ODRW] human metagenome; G_DNA_Buccal mucosa
1359
1284
-
Thr
CGT
[ENA]
¢þ
>WENV180911751
ODRW01000061
[ODRW] human metagenome; G_DNA_Buccal mucosa
1607
1680
+
His
GTG
[ENA]
¢þ
>WENV180911748
ODRW01000038
[ODRW] human metagenome; G_DNA_Buccal mucosa
1632
1716
+
Leu
TAG
[ENA]
¢þ
>WENV180911754
ODRW01000143
[ODRW] human metagenome; G_DNA_Buccal mucosa
1643
1570
-
Gly
TCC
[ENA]
¢þ
>WENV180911753
ODRW01000063
[ODRW] human metagenome; G_DNA_Buccal mucosa
1966
2053
+
Ser
CGA
[ENA]
¢þ
>WENV180911749
ODRW01000038
[ODRW] human metagenome; G_DNA_Buccal mucosa
2093
2168
+
Arg
TCG
[ENA]
¢þ
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
View ClustalW result
BACK