This is the navigation skips to jump to main contents
Jump to main contents.
tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
Top
|
Keyword
|
BLAST
|
Download
|
HOW TO USE
tRNA gene List
[ODSK] human metagenome; G_DNA_Posterior fornix
HIT:
53 sequence(s).
Download Sequence
View ClustalW result
The reliable tRNA genes
All candidate tRNA genes
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
>WENV180912609
ODSK01001009
[ODSK] human metagenome; G_DNA_Posterior fornix
73
1
-
Asn
GTT
[ENA]
¢þ
>WENV180912608
ODSK01000244
[ODSK] human metagenome; G_DNA_Posterior fornix
186
111
-
Ala
TGC
[ENA]
¢þ
>WENV180912606
ODSK01000068
[ODSK] human metagenome; G_DNA_Posterior fornix
216
125
-
Ser
GCT
[ENA]
¢þ
>WENV180912575
ODSK01000026
[ODSK] human metagenome; G_DNA_Posterior fornix
238
310
+
Thr
GGT
[ENA]
¢þ
>WENV180912557
ODSK01000001
[ODSK] human metagenome; G_DNA_Posterior fornix
278
192
-
Ser
CGA
[ENA]
¢þ
>WENV180912605
ODSK01000068
[ODSK] human metagenome; G_DNA_Posterior fornix
293
218
-
Ile
GAT
[ENA]
¢þ
>WENV180912607
ODSK01000244
[ODSK] human metagenome; G_DNA_Posterior fornix
295
222
-
Ile
GAT
[ENA]
¢þ
>WENV180912604
ODSK01000068
[ODSK] human metagenome; G_DNA_Posterior fornix
462
388
-
Phe
GAA
[ENA]
¢þ
>WENV180912603
ODSK01000068
[ODSK] human metagenome; G_DNA_Posterior fornix
541
466
-
Asp
GTC
[ENA]
¢þ
>WENV180912602
ODSK01000068
[ODSK] human metagenome; G_DNA_Posterior fornix
618
543
-
fMet
CAT
[ENA]
¢þ
>WENV180912601
ODSK01000068
[ODSK] human metagenome; G_DNA_Posterior fornix
727
652
-
Ile2
CAT
[ENA]
¢þ
>WENV180912600
ODSK01000068
[ODSK] human metagenome; G_DNA_Posterior fornix
811
736
-
Met
CAT
[ENA]
¢þ
>WENV180912599
ODSK01000068
[ODSK] human metagenome; G_DNA_Posterior fornix
917
842
-
Pro
TGG
[ENA]
¢þ
>WENV180912598
ODSK01000068
[ODSK] human metagenome; G_DNA_Posterior fornix
995
920
-
Arg
ACG
[ENA]
¢þ
>WENV180912597
ODSK01000068
[ODSK] human metagenome; G_DNA_Posterior fornix
1089
1003
-
Leu
TAA
[ENA]
¢þ
>WENV180912596
ODSK01000068
[ODSK] human metagenome; G_DNA_Posterior fornix
1173
1102
-
Gly
GCC
[ENA]
¢þ
>WENV180912595
ODSK01000068
[ODSK] human metagenome; G_DNA_Posterior fornix
1258
1184
-
Thr
TGT
[ENA]
¢þ
>WENV180912594
ODSK01000068
[ODSK] human metagenome; G_DNA_Posterior fornix
1369
1288
-
Leu
TAG
[ENA]
¢þ
>WENV180912593
ODSK01000068
[ODSK] human metagenome; G_DNA_Posterior fornix
1457
1383
-
Lys
TTT
[ENA]
¢þ
>WENV180912592
ODSK01000068
[ODSK] human metagenome; G_DNA_Posterior fornix
1536
1462
-
Val
TAC
[ENA]
¢þ
>WENV180912563
ODSK01000007
[ODSK] human metagenome; G_DNA_Posterior fornix
1542
1468
-
Thr
AGT
[ENA]
¢þ
>WENV180912589
ODSK01000051
[ODSK] human metagenome; G_DNA_Posterior fornix
2505
2420
-
Leu
CAA
[ENA]
¢þ
>WENV180912588
ODSK01000051
[ODSK] human metagenome; G_DNA_Posterior fornix
2602
2532
-
Cys
GCA
[ENA]
¢þ
>WENV180912587
ODSK01000051
[ODSK] human metagenome; G_DNA_Posterior fornix
2727
2654
-
His
GTG
[ENA]
¢þ
>WENV180912591
ODSK01000055
[ODSK] human metagenome; G_DNA_Posterior fornix
2770
2698
-
Thr
GGT
[ENA]
¢þ
>WENV180912586
ODSK01000051
[ODSK] human metagenome; G_DNA_Posterior fornix
2812
2740
-
Trp
CCA
[ENA]
¢þ
>WENV180912585
ODSK01000051
[ODSK] human metagenome; G_DNA_Posterior fornix
2898
2815
-
Tyr
GTA
[ENA]
¢þ
>WENV180912584
ODSK01000051
[ODSK] human metagenome; G_DNA_Posterior fornix
2980
2906
-
Phe
GAA
[ENA]
¢þ
>WENV180912583
ODSK01000051
[ODSK] human metagenome; G_DNA_Posterior fornix
3059
2984
-
Asp
GTC
[ENA]
¢þ
>WENV180912582
ODSK01000051
[ODSK] human metagenome; G_DNA_Posterior fornix
3136
3061
-
fMet
CAT
[ENA]
¢þ
>WENV180912590
ODSK01000053
[ODSK] human metagenome; G_DNA_Posterior fornix
3180
3256
+
Arg
TCT
[ENA]
¢þ
>WENV180912581
ODSK01000051
[ODSK] human metagenome; G_DNA_Posterior fornix
3234
3144
-
Ser
TGA
[ENA]
¢þ
>WENV180912580
ODSK01000051
[ODSK] human metagenome; G_DNA_Posterior fornix
3343
3272
-
Glu
TTC
[ENA]
¢þ
>WENV180912562
ODSK01000006
[ODSK] human metagenome; G_DNA_Posterior fornix
5509
5434
-
Arg
CCT
[ENA]
¢þ
>WENV180912576
ODSK01000026
[ODSK] human metagenome; G_DNA_Posterior fornix
8677
8606
-
Gly
CCC
[ENA]
¢þ
>WENV180912574
ODSK01000023
[ODSK] human metagenome; G_DNA_Posterior fornix
10251
10179
-
Gln
CTG
[ENA]
¢þ
>WENV180912573
ODSK01000023
[ODSK] human metagenome; G_DNA_Posterior fornix
10329
10256
-
Glu
CTC
[ENA]
¢þ
>WENV180912579
ODSK01000032
[ODSK] human metagenome; G_DNA_Posterior fornix
19025
18951
-
Val
TAC
[ENA]
¢þ
>WENV180912578
ODSK01000032
[ODSK] human metagenome; G_DNA_Posterior fornix
19102
19029
-
Glu
TTC
[ENA]
¢þ
>WENV180912577
ODSK01000032
[ODSK] human metagenome; G_DNA_Posterior fornix
19282
19190
-
Ser
GGA
[ENA]
¢þ
>WENV180912570
ODSK01000012
[ODSK] human metagenome; G_DNA_Posterior fornix
19717
19802
+
Leu
CAG
[ENA]
¢þ
>WENV180912569
ODSK01000011
[ODSK] human metagenome; G_DNA_Posterior fornix
21710
21623
-
Leu
AAG
[ENA]
¢þ
>WENV180912561
ODSK01000004
[ODSK] human metagenome; G_DNA_Posterior fornix
35296
35222
-
Gly
GCC
[ENA]
¢þ
>WENV180912560
ODSK01000004
[ODSK] human metagenome; G_DNA_Posterior fornix
35430
35355
-
Pro
CGG
[ENA]
¢þ
>WENV180912559
ODSK01000004
[ODSK] human metagenome; G_DNA_Posterior fornix
35546
35475
-
Gly
GCC
[ENA]
¢þ
>WENV180912571
ODSK01000014
[ODSK] human metagenome; G_DNA_Posterior fornix
36621
36694
+
Lys
CTT
[ENA]
¢þ
>WENV180912572
ODSK01000014
[ODSK] human metagenome; G_DNA_Posterior fornix
40794
40867
+
Lys
CTT
[ENA]
¢þ
>WENV180912568
ODSK01000011
[ODSK] human metagenome; G_DNA_Posterior fornix
42187
42114
-
Gln
TTG
[ENA]
¢þ
>WENV180912567
ODSK01000011
[ODSK] human metagenome; G_DNA_Posterior fornix
42274
42191
-
Tyr
GTA
[ENA]
¢þ
>WENV180912566
ODSK01000011
[ODSK] human metagenome; G_DNA_Posterior fornix
42693
42622
-
Gln
TTG
[ENA]
¢þ
>WENV180912564
ODSK01000011
[ODSK] human metagenome; G_DNA_Posterior fornix
44892
44964
+
Thr
CGT
[ENA]
¢þ
>WENV180912565
ODSK01000011
[ODSK] human metagenome; G_DNA_Posterior fornix
45025
45100
+
Arg
ACG
[ENA]
¢þ
>WENV180912558
ODSK01000002
[ODSK] human metagenome; G_DNA_Posterior fornix
90725
90654
-
Arg
CCG
[ENA]
¢þ
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
View ClustalW result
BACK