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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
|
BLAST
|
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HOW TO USE
tRNA gene List
[ODSW] human metagenome; G_DNA_Posterior fornix
HIT:
110 sequence(s).
Download Sequence
View ClustalW result
The reliable tRNA genes
All candidate tRNA genes
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
>WENV180914441
ODSW01008740
[ODSW] human metagenome; G_DNA_Posterior fornix
26
101
+
Glu
CTC
[ENA]
¢þ
>WENV180914433
ODSW01006720
[ODSW] human metagenome; G_DNA_Posterior fornix
59
151
+
Ser
GGA
[ENA]
¢þ
>WENV180914417
ODSW01001002
[ODSW] human metagenome; G_DNA_Posterior fornix
60
134
+
Val
TAC
[ENA]
¢þ
>WENV180914427
ODSW01002659
[ODSW] human metagenome; G_DNA_Posterior fornix
66
140
+
Asn
GTT
[ENA]
¢þ
>WENV180914397
ODSW01000172
[ODSW] human metagenome; G_DNA_Posterior fornix
66
140
+
Asn
GTT
[ENA]
¢þ
>WENV180914428
ODSW01003895
[ODSW] human metagenome; G_DNA_Posterior fornix
66
140
+
Asn
GTT
[ENA]
¢þ
>WENV180914408
ODSW01000218
[ODSW] human metagenome; G_DNA_Posterior fornix
79
7
-
Lys
CTT
[ENA]
¢þ
>WENV180914367
ODSW01000085
[ODSW] human metagenome; G_DNA_Posterior fornix
80
6
-
Lys
CTT
[ENA]
¢þ
>WENV180914440
ODSW01007969
[ODSW] human metagenome; G_DNA_Posterior fornix
97
24
-
Cys
GCA
[ENA]
¢þ
>WENV180914437
ODSW01007410
[ODSW] human metagenome; G_DNA_Posterior fornix
101
26
-
Glu
TTC
[ENA]
¢þ
>WENV180914425
ODSW01002387
[ODSW] human metagenome; G_DNA_Posterior fornix
103
27
-
Met
CAT
[ENA]
¢þ
>WENV180914416
ODSW01000972
[ODSW] human metagenome; G_DNA_Posterior fornix
111
26
-
Leu
GAG
[ENA]
¢þ
>WENV180914443
ODSW01011415
[ODSW] human metagenome; G_DNA_Posterior fornix
123
198
+
His
GTG
[ENA]
¢þ
>WENV180914410
ODSW01000322
[ODSW] human metagenome; G_DNA_Posterior fornix
136
60
-
Pro
TGG
[ENA]
¢þ
>WENV180914426
ODSW01002406
[ODSW] human metagenome; G_DNA_Posterior fornix
136
211
+
Trp
CCA
[ENA]
¢þ
>WENV180914418
ODSW01001002
[ODSW] human metagenome; G_DNA_Posterior fornix
138
210
+
Lys
TTT
[ENA]
¢þ
>WENV180914432
ODSW01006002
[ODSW] human metagenome; G_DNA_Posterior fornix
142
66
-
Leu
CAA
[ENA]
¢þ
>WENV180914436
ODSW01007115
[ODSW] human metagenome; G_DNA_Posterior fornix
142
67
-
Val
TAC
[ENA]
¢þ
>WENV180914438
ODSW01007632
[ODSW] human metagenome; G_DNA_Posterior fornix
148
74
-
Ala
TGC
[ENA]
¢þ
>WENV180914398
ODSW01000172
[ODSW] human metagenome; G_DNA_Posterior fornix
149
241
+
Ser
GGA
[ENA]
¢þ
>WENV180914439
ODSW01007779
[ODSW] human metagenome; G_DNA_Posterior fornix
160
236
+
Arg
TCT
[ENA]
¢þ
>WENV180914409
ODSW01000310
[ODSW] human metagenome; G_DNA_Posterior fornix
161
250
+
Ser
GGA
[ENA]
¢þ
>WENV180914415
ODSW01000798
[ODSW] human metagenome; G_DNA_Posterior fornix
165
92
-
Gly
TCC
[ENA]
¢þ
>WENV180914429
ODSW01004305
[ODSW] human metagenome; G_DNA_Posterior fornix
167
93
-
Lys
CTT
[ENA]
¢þ
>WENV180914434
ODSW01006758
[ODSW] human metagenome; G_DNA_Posterior fornix
186
111
-
Ala
TGC
[ENA]
¢þ
>WENV180914430
ODSW01004946
[ODSW] human metagenome; G_DNA_Posterior fornix
191
265
+
Pro
GGG
[ENA]
¢þ
>WENV180914442
ODSW01009792
[ODSW] human metagenome; G_DNA_Posterior fornix
207
129
-
His
GTG
[ENA]
¢þ
>WENV180914435
ODSW01006759
[ODSW] human metagenome; G_DNA_Posterior fornix
216
125
-
Ser
GCT
[ENA]
¢þ
>WENV180914419
ODSW01001002
[ODSW] human metagenome; G_DNA_Posterior fornix
223
306
+
Leu
TAG
[ENA]
¢þ
>WENV180914413
ODSW01000686
[ODSW] human metagenome; G_DNA_Posterior fornix
231
321
+
Ser
TGA
[ENA]
¢þ
>WENV180914431
ODSW01005145
[ODSW] human metagenome; G_DNA_Posterior fornix
237
309
+
Thr
TGT
[ENA]
¢þ
>WENV180914424
ODSW01001529
[ODSW] human metagenome; G_DNA_Posterior fornix
238
166
-
Gln
TTG
[ENA]
¢þ
>WENV180914414
ODSW01000798
[ODSW] human metagenome; G_DNA_Posterior fornix
274
190
-
Tyr
GTA
[ENA]
¢þ
>WENV180914420
ODSW01001002
[ODSW] human metagenome; G_DNA_Posterior fornix
329
403
+
Thr
TGT
[ENA]
¢þ
>WENV180914411
ODSW01000653
[ODSW] human metagenome; G_DNA_Posterior fornix
386
476
+
Ser
GCT
[ENA]
¢þ
>WENV180914421
ODSW01001002
[ODSW] human metagenome; G_DNA_Posterior fornix
413
484
+
Gly
GCC
[ENA]
¢þ
>WENV180914423
ODSW01001277
[ODSW] human metagenome; G_DNA_Posterior fornix
463
536
+
Asn
GTT
[ENA]
¢þ
>WENV180914422
ODSW01001002
[ODSW] human metagenome; G_DNA_Posterior fornix
496
581
+
Leu
TAA
[ENA]
¢þ
>WENV180914412
ODSW01000653
[ODSW] human metagenome; G_DNA_Posterior fornix
585
661
+
Arg
ACG
[ENA]
¢þ
>WENV180914392
ODSW01000133
[ODSW] human metagenome; G_DNA_Posterior fornix
602
529
-
Pro
CGG
[ENA]
¢þ
>WENV180914396
ODSW01000157
[ODSW] human metagenome; G_DNA_Posterior fornix
682
756
+
Thr
AGT
[ENA]
¢þ
>WENV180914391
ODSW01000133
[ODSW] human metagenome; G_DNA_Posterior fornix
713
639
-
Gly
GCC
[ENA]
¢þ
>WENV180914390
ODSW01000133
[ODSW] human metagenome; G_DNA_Posterior fornix
899
825
-
Gly
GCC
[ENA]
¢þ
>WENV180914389
ODSW01000133
[ODSW] human metagenome; G_DNA_Posterior fornix
1085
1011
-
Gly
GCC
[ENA]
¢þ
>WENV180914399
ODSW01000172
[ODSW] human metagenome; G_DNA_Posterior fornix
1368
1440
+
Glu
TTC
[ENA]
¢þ
>WENV180914400
ODSW01000172
[ODSW] human metagenome; G_DNA_Posterior fornix
1444
1518
+
Val
TAC
[ENA]
¢þ
>WENV180914404
ODSW01000202
[ODSW] human metagenome; G_DNA_Posterior fornix
1663
1589
-
Arg
CCT
[ENA]
¢þ
>WENV180914395
ODSW01000142
[ODSW] human metagenome; G_DNA_Posterior fornix
2301
2215
-
Leu
CAG
[ENA]
¢þ
>WENV180914407
ODSW01000217
[ODSW] human metagenome; G_DNA_Posterior fornix
2613
2542
-
Arg
CCG
[ENA]
¢þ
>WENV180914350
ODSW01000033
[ODSW] human metagenome; G_DNA_Posterior fornix
2865
2937
+
Thr
GGT
[ENA]
¢þ
>WENV180914403
ODSW01000192
[ODSW] human metagenome; G_DNA_Posterior fornix
3175
3090
-
Leu
CAG
[ENA]
¢þ
>WENV180914402
ODSW01000181
[ODSW] human metagenome; G_DNA_Posterior fornix
3692
3617
-
Ala
TGC
[ENA]
¢þ
>WENV180914401
ODSW01000181
[ODSW] human metagenome; G_DNA_Posterior fornix
3799
3723
-
Ile
GAT
[ENA]
¢þ
>WENV180914405
ODSW01000215
[ODSW] human metagenome; G_DNA_Posterior fornix
4079
4150
+
Glu
TTC
[ENA]
¢þ
>WENV180914406
ODSW01000215
[ODSW] human metagenome; G_DNA_Posterior fornix
4188
4278
+
Ser
TGA
[ENA]
¢þ
>WENV180914352
ODSW01000040
[ODSW] human metagenome; G_DNA_Posterior fornix
4742
4829
+
Leu
AAG
[ENA]
¢þ
>WENV180914344
ODSW01000004
[ODSW] human metagenome; G_DNA_Posterior fornix
5545
5471
-
Val
TAC
[ENA]
¢þ
>WENV180914343
ODSW01000004
[ODSW] human metagenome; G_DNA_Posterior fornix
5624
5549
-
His
GTG
[ENA]
¢þ
>WENV180914394
ODSW01000141
[ODSW] human metagenome; G_DNA_Posterior fornix
5681
5605
-
Arg
TCT
[ENA]
¢þ
>WENV180914342
ODSW01000004
[ODSW] human metagenome; G_DNA_Posterior fornix
5705
5630
-
Asp
GTC
[ENA]
¢þ
>WENV180914341
ODSW01000004
[ODSW] human metagenome; G_DNA_Posterior fornix
5782
5707
-
fMet
CAT
[ENA]
¢þ
>WENV180914393
ODSW01000136
[ODSW] human metagenome; G_DNA_Posterior fornix
5817
5745
-
Thr
GGT
[ENA]
¢þ
>WENV180914340
ODSW01000004
[ODSW] human metagenome; G_DNA_Posterior fornix
5879
5793
-
Ser
TGA
[ENA]
¢þ
>WENV180914348
ODSW01000022
[ODSW] human metagenome; G_DNA_Posterior fornix
5956
5881
-
Arg
CCT
[ENA]
¢þ
>WENV180914361
ODSW01000070
[ODSW] human metagenome; G_DNA_Posterior fornix
6750
6677
-
Arg
CCG
[ENA]
¢þ
>WENV180914368
ODSW01000092
[ODSW] human metagenome; G_DNA_Posterior fornix
7292
7367
+
Thr
CGT
[ENA]
¢þ
>WENV180914364
ODSW01000080
[ODSW] human metagenome; G_DNA_Posterior fornix
8436
8510
+
Lys
CTT
[ENA]
¢þ
>WENV180914347
ODSW01000019
[ODSW] human metagenome; G_DNA_Posterior fornix
8587
8513
-
Thr
AGT
[ENA]
¢þ
>WENV180914355
ODSW01000056
[ODSW] human metagenome; G_DNA_Posterior fornix
8799
8727
-
Gln
CTG
[ENA]
¢þ
>WENV180914354
ODSW01000056
[ODSW] human metagenome; G_DNA_Posterior fornix
8877
8804
-
Glu
CTC
[ENA]
¢þ
>WENV180914388
ODSW01000110
[ODSW] human metagenome; G_DNA_Posterior fornix
8977
8891
-
Leu
CAA
[ENA]
¢þ
>WENV180914365
ODSW01000080
[ODSW] human metagenome; G_DNA_Posterior fornix
8980
9054
+
Lys
CTT
[ENA]
¢þ
>WENV180914387
ODSW01000110
[ODSW] human metagenome; G_DNA_Posterior fornix
9088
9018
-
Cys
GCA
[ENA]
¢þ
>WENV180914386
ODSW01000110
[ODSW] human metagenome; G_DNA_Posterior fornix
9184
9111
-
Gln
TTG
[ENA]
¢þ
>WENV180914385
ODSW01000110
[ODSW] human metagenome; G_DNA_Posterior fornix
9263
9190
-
His
GTG
[ENA]
¢þ
>WENV180914384
ODSW01000110
[ODSW] human metagenome; G_DNA_Posterior fornix
9347
9275
-
Trp
CCA
[ENA]
¢þ
>WENV180914383
ODSW01000110
[ODSW] human metagenome; G_DNA_Posterior fornix
9433
9350
-
Tyr
GTA
[ENA]
¢þ
>WENV180914382
ODSW01000110
[ODSW] human metagenome; G_DNA_Posterior fornix
9512
9437
-
Phe
GAA
[ENA]
¢þ
>WENV180914381
ODSW01000110
[ODSW] human metagenome; G_DNA_Posterior fornix
9592
9517
-
Asp
GTC
[ENA]
¢þ
>WENV180914380
ODSW01000110
[ODSW] human metagenome; G_DNA_Posterior fornix
9669
9594
-
fMet
CAT
[ENA]
¢þ
>WENV180914379
ODSW01000110
[ODSW] human metagenome; G_DNA_Posterior fornix
9766
9680
-
Ser
TGA
[ENA]
¢þ
>WENV180914378
ODSW01000110
[ODSW] human metagenome; G_DNA_Posterior fornix
9872
9799
-
Glu
TTC
[ENA]
¢þ
>WENV180914346
ODSW01000007
[ODSW] human metagenome; G_DNA_Posterior fornix
10182
10257
+
Arg
TCT
[ENA]
¢þ
>WENV180914360
ODSW01000062
[ODSW] human metagenome; G_DNA_Posterior fornix
10675
10602
-
Gln
TTG
[ENA]
¢þ
>WENV180914377
ODSW01000110
[ODSW] human metagenome; G_DNA_Posterior fornix
10717
10627
-
Ser
GCT
[ENA]
¢þ
>WENV180914359
ODSW01000062
[ODSW] human metagenome; G_DNA_Posterior fornix
10762
10679
-
Tyr
GTA
[ENA]
¢þ
>WENV180914376
ODSW01000110
[ODSW] human metagenome; G_DNA_Posterior fornix
10795
10719
-
Ile
GAT
[ENA]
¢þ
>WENV180914375
ODSW01000110
[ODSW] human metagenome; G_DNA_Posterior fornix
10963
10889
-
Phe
GAA
[ENA]
¢þ
>WENV180914374
ODSW01000110
[ODSW] human metagenome; G_DNA_Posterior fornix
11043
10968
-
Asp
GTC
[ENA]
¢þ
>WENV180914373
ODSW01000110
[ODSW] human metagenome; G_DNA_Posterior fornix
11120
11045
-
fMet
CAT
[ENA]
¢þ
>WENV180914358
ODSW01000062
[ODSW] human metagenome; G_DNA_Posterior fornix
11181
11110
-
Gln
TTG
[ENA]
¢þ
>WENV180914372
ODSW01000110
[ODSW] human metagenome; G_DNA_Posterior fornix
11217
11142
-
Ile2
CAT
[ENA]
¢þ
>WENV180914351
ODSW01000033
[ODSW] human metagenome; G_DNA_Posterior fornix
11303
11232
-
Gly
CCC
[ENA]
¢þ
>WENV180914371
ODSW01000110
[ODSW] human metagenome; G_DNA_Posterior fornix
11304
11229
-
Met
CAT
[ENA]
¢þ
>WENV180914370
ODSW01000110
[ODSW] human metagenome; G_DNA_Posterior fornix
11407
11334
-
Pro
TGG
[ENA]
¢þ
>WENV180914369
ODSW01000110
[ODSW] human metagenome; G_DNA_Posterior fornix
11487
11412
-
Arg
ACG
[ENA]
¢þ
>WENV180914353
ODSW01000044
[ODSW] human metagenome; G_DNA_Posterior fornix
12868
12938
+
Gly
CCC
[ENA]
¢þ
>WENV180914356
ODSW01000062
[ODSW] human metagenome; G_DNA_Posterior fornix
13380
13452
+
Thr
CGT
[ENA]
¢þ
>WENV180914357
ODSW01000062
[ODSW] human metagenome; G_DNA_Posterior fornix
13513
13588
+
Arg
ACG
[ENA]
¢þ
>WENV180914366
ODSW01000080
[ODSW] human metagenome; G_DNA_Posterior fornix
15223
15150
-
Asn
GTT
[ENA]
¢þ
>WENV180914363
ODSW01000077
[ODSW] human metagenome; G_DNA_Posterior fornix
16125
16040
-
Leu
CAA
[ENA]
¢þ
>WENV180914362
ODSW01000077
[ODSW] human metagenome; G_DNA_Posterior fornix
16222
16152
-
Cys
GCA
[ENA]
¢þ
>WENV180914339
ODSW01000004
[ODSW] human metagenome; G_DNA_Posterior fornix
23729
23644
-
Leu
AAG
[ENA]
¢þ
>WENV180914349
ODSW01000026
[ODSW] human metagenome; G_DNA_Posterior fornix
29146
29060
-
Ser
CGA
[ENA]
¢þ
>WENV180914345
ODSW01000006
[ODSW] human metagenome; G_DNA_Posterior fornix
34895
34823
-
Trp
CCA
[ENA]
¢þ
>WENV180914338
ODSW01000004
[ODSW] human metagenome; G_DNA_Posterior fornix
40744
40671
-
Gln
TTG
[ENA]
¢þ
>WENV180914337
ODSW01000004
[ODSW] human metagenome; G_DNA_Posterior fornix
40859
40778
-
Tyr
GTA
[ENA]
¢þ
>WENV180914336
ODSW01000004
[ODSW] human metagenome; G_DNA_Posterior fornix
52894
52821
-
Gln
TTG
[ENA]
¢þ
>WENV180914335
ODSW01000001
[ODSW] human metagenome; G_DNA_Posterior fornix
57801
57729
-
Gln
CTG
[ENA]
¢þ
>WENV180914334
ODSW01000001
[ODSW] human metagenome; G_DNA_Posterior fornix
57879
57806
-
Glu
CTC
[ENA]
¢þ
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
View ClustalW result
BACK