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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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HOW TO USE
tRNA gene List
[ODTA] human metagenome; G_DNA_Anterior nares
HIT:
33 sequence(s).
Download Sequence
View ClustalW result
The reliable tRNA genes
All candidate tRNA genes
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
>WENV180914934
ODTA01002568
[ODTA] human metagenome; G_DNA_Anterior nares
60
133
+
Arg
CCT
[ENA]
¢þ
>WENV180914936
ODTA01002726
[ODTA] human metagenome; G_DNA_Anterior nares
72
1
-
Cys
GCA
[ENA]
¢þ
>WENV180914944
ODTA01004222
[ODTA] human metagenome; G_DNA_Anterior nares
72
145
+
Ala
GGC
[ENA]
¢þ
>WENV180914923
ODTA01000402
[ODTA] human metagenome; G_DNA_Anterior nares
81
155
+
Pro
GGG
[ENA]
¢þ
>WENV180914939
ODTA01002800
[ODTA] human metagenome; G_DNA_Anterior nares
95
25
-
Met
CAT
[ENA]
¢þ
>WENV180914940
ODTA01002984
[ODTA] human metagenome; G_DNA_Anterior nares
95
181
+
Leu
GAG
[ENA]
¢þ
>WENV180914932
ODTA01002345
[ODTA] human metagenome; G_DNA_Anterior nares
99
26
-
Arg
ACG
[ENA]
¢þ
>WENV180914943
ODTA01003919
[ODTA] human metagenome; G_DNA_Anterior nares
107
182
+
Trp
CCA
[ENA]
¢þ
>WENV180914942
ODTA01003818
[ODTA] human metagenome; G_DNA_Anterior nares
141
217
+
Ile
GAT
[ENA]
¢þ
>WENV180914929
ODTA01001610
[ODTA] human metagenome; G_DNA_Anterior nares
145
70
-
Thr
GGT
[ENA]
¢þ
>WENV180914938
ODTA01002767
[ODTA] human metagenome; G_DNA_Anterior nares
148
75
-
Ala
TGC
[ENA]
¢þ
>WENV180914935
ODTA01002625
[ODTA] human metagenome; G_DNA_Anterior nares
149
225
+
Ile
GAT
[ENA]
¢þ
>WENV180914925
ODTA01000871
[ODTA] human metagenome; G_DNA_Anterior nares
157
230
+
Lys
TTT
[ENA]
¢þ
>WENV180914920
ODTA01000306
[ODTA] human metagenome; G_DNA_Anterior nares
162
87
-
Trp
CCA
[ENA]
¢þ
>WENV180914927
ODTA01001015
[ODTA] human metagenome; G_DNA_Anterior nares
171
243
+
Gln
CTG
[ENA]
¢þ
>WENV180914945
ODTA01004435
[ODTA] human metagenome; G_DNA_Anterior nares
177
89
-
Ser
GCT
[ENA]
¢þ
>WENV180914930
ODTA01001687
[ODTA] human metagenome; G_DNA_Anterior nares
187
111
-
Pro
TGG
[ENA]
¢þ
>WENV180914933
ODTA01002443
[ODTA] human metagenome; G_DNA_Anterior nares
205
278
+
Ala
CGC
[ENA]
¢þ
>WENV180914931
ODTA01001900
[ODTA] human metagenome; G_DNA_Anterior nares
228
301
+
Lys
CTT
[ENA]
¢þ
>WENV180914937
ODTA01002767
[ODTA] human metagenome; G_DNA_Anterior nares
234
158
-
Ile
GAT
[ENA]
¢þ
>WENV180914941
ODTA01003680
[ODTA] human metagenome; G_DNA_Anterior nares
235
160
-
Ile2
CAT
[ENA]
¢þ
>WENV180914922
ODTA01000394
[ODTA] human metagenome; G_DNA_Anterior nares
273
348
+
Arg
CCG
[ENA]
¢þ
>WENV180914918
ODTA01000285
[ODTA] human metagenome; G_DNA_Anterior nares
338
264
-
Ile2
CAT
[ENA]
¢þ
>WENV180914921
ODTA01000307
[ODTA] human metagenome; G_DNA_Anterior nares
340
413
+
Asn
GTT
[ENA]
¢þ
>WENV180914928
ODTA01001015
[ODTA] human metagenome; G_DNA_Anterior nares
349
424
+
Glu
CTC
[ENA]
¢þ
>WENV180914926
ODTA01000872
[ODTA] human metagenome; G_DNA_Anterior nares
402
329
-
Lys
CTT
[ENA]
¢þ
>WENV180914917
ODTA01000282
[ODTA] human metagenome; G_DNA_Anterior nares
406
332
-
Leu
CAA
[ENA]
¢þ
>WENV180914914
ODTA01000085
[ODTA] human metagenome; G_DNA_Anterior nares
452
541
+
Leu
GAG
[ENA]
¢þ
>WENV180914924
ODTA01000432
[ODTA] human metagenome; G_DNA_Anterior nares
456
528
+
Val
CAC
[ENA]
¢þ
>WENV180914919
ODTA01000306
[ODTA] human metagenome; G_DNA_Anterior nares
709
635
-
Met
CAT
[ENA]
¢þ
>WENV180914913
ODTA01000072
[ODTA] human metagenome; G_DNA_Anterior nares
899
972
+
Gly
CCC
[ENA]
¢þ
>WENV180914916
ODTA01000164
[ODTA] human metagenome; G_DNA_Anterior nares
964
1038
+
Leu
TAA
[ENA]
¢þ
>WENV180914915
ODTA01000087
[ODTA] human metagenome; G_DNA_Anterior nares
1124
1051
-
Arg
TCT
[ENA]
¢þ
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
View ClustalW result
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