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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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|
Keyword
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BLAST
|
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HOW TO USE
tRNA gene List
[ODTT] human metagenome; G_DNA_Anterior nares
HIT:
39 sequence(s).
Download Sequence
View ClustalW result
The reliable tRNA genes
All candidate tRNA genes
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
>WENV180935314
ODTT01004922
[ODTT] human metagenome; G_DNA_Anterior nares
24
106
+
Tyr
GTA
[ENA]
¢þ
>WENV180935298
ODTT01001309
[ODTT] human metagenome; G_DNA_Anterior nares
71
141
+
Met
CAT
[ENA]
¢þ
>WENV180935306
ODTT01002803
[ODTT] human metagenome; G_DNA_Anterior nares
96
21
-
Lys
TTT
[ENA]
¢þ
>WENV180935312
ODTT01004382
[ODTT] human metagenome; G_DNA_Anterior nares
124
54
-
Val
TAC
[ENA]
¢þ
>WENV180935322
ODTT01008369
[ODTT] human metagenome; G_DNA_Anterior nares
124
200
+
Ile
GAT
[ENA]
¢þ
>WENV180935320
ODTT01006868
[ODTT] human metagenome; G_DNA_Anterior nares
125
52
-
Thr
GGT
[ENA]
¢þ
>WENV180935304
ODTT01002694
[ODTT] human metagenome; G_DNA_Anterior nares
131
57
-
Ala
TGC
[ENA]
¢þ
>WENV180935319
ODTT01006239
[ODTT] human metagenome; G_DNA_Anterior nares
151
76
-
Val
TAC
[ENA]
¢þ
>WENV180935315
ODTT01004922
[ODTT] human metagenome; G_DNA_Anterior nares
151
235
+
Ser
TGA
[ENA]
¢þ
>WENV180935317
ODTT01006196
[ODTT] human metagenome; G_DNA_Anterior nares
154
228
+
Glu
TTC
[ENA]
¢þ
>WENV180935321
ODTT01007847
[ODTT] human metagenome; G_DNA_Anterior nares
162
89
-
Trp
CCA
[ENA]
¢þ
>WENV180935295
ODTT01000658
[ODTT] human metagenome; G_DNA_Anterior nares
190
263
+
Gly
CCC
[ENA]
¢þ
>WENV180935286
ODTT01000187
[ODTT] human metagenome; G_DNA_Anterior nares
191
107
-
Leu
CAA
[ENA]
¢þ
>WENV180935308
ODTT01003245
[ODTT] human metagenome; G_DNA_Anterior nares
196
112
-
Leu
TAG
[ENA]
¢þ
>WENV180935313
ODTT01004493
[ODTT] human metagenome; G_DNA_Anterior nares
198
124
-
Leu
TAA
[ENA]
¢þ
>WENV180935305
ODTT01002803
[ODTT] human metagenome; G_DNA_Anterior nares
205
276
+
Gly
TCC
[ENA]
¢þ
>WENV180935309
ODTT01003816
[ODTT] human metagenome; G_DNA_Anterior nares
216
137
-
Gln
TTG
[ENA]
¢þ
>WENV180935316
ODTT01004993
[ODTT] human metagenome; G_DNA_Anterior nares
218
143
-
Arg
TCG
[ENA]
¢þ
>WENV180935318
ODTT01006239
[ODTT] human metagenome; G_DNA_Anterior nares
230
156
-
Glu
TTC
[ENA]
¢þ
>WENV180935292
ODTT01000381
[ODTT] human metagenome; G_DNA_Anterior nares
232
156
-
Pro
CGG
[ENA]
¢þ
>WENV180935307
ODTT01002953
[ODTT] human metagenome; G_DNA_Anterior nares
236
311
+
Thr
TGT
[ENA]
¢þ
>WENV180935301
ODTT01002034
[ODTT] human metagenome; G_DNA_Anterior nares
237
313
+
fMet
CAT
[ENA]
¢þ
>WENV180935299
ODTT01001612
[ODTT] human metagenome; G_DNA_Anterior nares
248
320
+
Gln
CTG
[ENA]
¢þ
>WENV180935293
ODTT01000449
[ODTT] human metagenome; G_DNA_Anterior nares
284
201
-
Leu
TAG
[ENA]
¢þ
>WENV180935310
ODTT01004029
[ODTT] human metagenome; G_DNA_Anterior nares
289
206
-
Gly
GCC
[ENA]
¢þ
>WENV180935311
ODTT01004057
[ODTT] human metagenome; G_DNA_Anterior nares
304
214
-
Ser
GCT
[ENA]
¢þ
>WENV180935285
ODTT01000141
[ODTT] human metagenome; G_DNA_Anterior nares
304
379
+
Thr
CGT
[ENA]
¢þ
>WENV180935297
ODTT01001244
[ODTT] human metagenome; G_DNA_Anterior nares
373
299
-
Pro
GGG
[ENA]
¢þ
>WENV180935302
ODTT01002415
[ODTT] human metagenome; G_DNA_Anterior nares
385
311
-
Met
CAT
[ENA]
¢þ
>WENV180935303
ODTT01002474
[ODTT] human metagenome; G_DNA_Anterior nares
403
328
-
Pro
TGG
[ENA]
¢þ
>WENV180935300
ODTT01001736
[ODTT] human metagenome; G_DNA_Anterior nares
403
477
+
Ile2
CAT
[ENA]
¢þ
>WENV180935296
ODTT01000726
[ODTT] human metagenome; G_DNA_Anterior nares
453
379
-
Ile
GAT
[ENA]
¢þ
>WENV180935294
ODTT01000484
[ODTT] human metagenome; G_DNA_Anterior nares
537
464
-
Arg
CCT
[ENA]
¢þ
>WENV180935287
ODTT01000260
[ODTT] human metagenome; G_DNA_Anterior nares
729
655
-
Val
TAC
[ENA]
¢þ
>WENV180935291
ODTT01000378
[ODTT] human metagenome; G_DNA_Anterior nares
792
720
-
Val
GAC
[ENA]
¢þ
>WENV180935290
ODTT01000378
[ODTT] human metagenome; G_DNA_Anterior nares
864
793
-
Cys
GCA
[ENA]
¢þ
>WENV180935288
ODTT01000264
[ODTT] human metagenome; G_DNA_Anterior nares
868
793
-
His
GTG
[ENA]
¢þ
>WENV180935289
ODTT01000314
[ODTT] human metagenome; G_DNA_Anterior nares
920
845
-
Phe
GAA
[ENA]
¢þ
>WENV180935284
ODTT01000137
[ODTT] human metagenome; G_DNA_Anterior nares
1112
1185
+
Asn
GTT
[ENA]
¢þ
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
View ClustalW result
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