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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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|
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HOW TO USE
tRNA gene List
[ODWD] human metagenome; G_DNA_Buccal mucosa
HIT:
99 sequence(s).
Download Sequence
View ClustalW result
The reliable tRNA genes
All candidate tRNA genes
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
>WENV181007159
ODWD01010795
[ODWD] human metagenome; G_DNA_Buccal mucosa
6
82
+
Pro
TGG
[ENA]
¢þ
>WENV181007172
ODWD01014584
[ODWD] human metagenome; G_DNA_Buccal mucosa
18
93
+
Phe
GAA
[ENA]
¢þ
>WENV181007180
ODWD01018580
[ODWD] human metagenome; G_DNA_Buccal mucosa
31
103
+
Gln
CTG
[ENA]
¢þ
>WENV181007163
ODWD01013442
[ODWD] human metagenome; G_DNA_Buccal mucosa
41
127
+
Leu
GAG
[ENA]
¢þ
>WENV181007170
ODWD01014285
[ODWD] human metagenome; G_DNA_Buccal mucosa
46
121
+
Phe
GAA
[ENA]
¢þ
>WENV181007175
ODWD01014721
[ODWD] human metagenome; G_DNA_Buccal mucosa
53
128
+
Thr
GGT
[ENA]
¢þ
>WENV181007126
ODWD01000387
[ODWD] human metagenome; G_DNA_Buccal mucosa
59
131
+
Val
TAC
[ENA]
¢þ
>WENV181007153
ODWD01009879
[ODWD] human metagenome; G_DNA_Buccal mucosa
59
134
+
Met
CAT
[ENA]
¢þ
>WENV181007189
ODWD01023321
[ODWD] human metagenome; G_DNA_Buccal mucosa
60
136
+
Ile
GAT
[ENA]
¢þ
>WENV181007196
ODWD01025526
[ODWD] human metagenome; G_DNA_Buccal mucosa
61
136
+
Asp
GTC
[ENA]
¢þ
>WENV181007190
ODWD01023656
[ODWD] human metagenome; G_DNA_Buccal mucosa
70
143
+
Gly
CCC
[ENA]
¢þ
>WENV181007169
ODWD01014200
[ODWD] human metagenome; G_DNA_Buccal mucosa
76
4
-
Phe
GAA
[ENA]
¢þ
>WENV181007199
ODWD01025821
[ODWD] human metagenome; G_DNA_Buccal mucosa
76
151
+
Arg
TCT
[ENA]
¢þ
>WENV181007155
ODWD01010467
[ODWD] human metagenome; G_DNA_Buccal mucosa
76
152
+
Thr
TGT
[ENA]
¢þ
>WENV181007182
ODWD01018770
[ODWD] human metagenome; G_DNA_Buccal mucosa
84
159
+
Ala
TGC
[ENA]
¢þ
>WENV181007193
ODWD01024175
[ODWD] human metagenome; G_DNA_Buccal mucosa
88
5
-
Leu
TAG
[ENA]
¢þ
>WENV181007183
ODWD01019903
[ODWD] human metagenome; G_DNA_Buccal mucosa
90
164
+
Ala
TGC
[ENA]
¢þ
>WENV181007178
ODWD01015770
[ODWD] human metagenome; G_DNA_Buccal mucosa
90
166
+
Ile
GAT
[ENA]
¢þ
>WENV181007164
ODWD01013447
[ODWD] human metagenome; G_DNA_Buccal mucosa
95
170
+
Pro
TGG
[ENA]
¢þ
>WENV181007188
ODWD01022826
[ODWD] human metagenome; G_DNA_Buccal mucosa
98
25
-
Ala
GGC
[ENA]
¢þ
>WENV181007191
ODWD01024100
[ODWD] human metagenome; G_DNA_Buccal mucosa
100
16
-
Tyr
GTA
[ENA]
¢þ
>WENV181007173
ODWD01014584
[ODWD] human metagenome; G_DNA_Buccal mucosa
101
175
+
Gly
GCC
[ENA]
¢þ
>WENV181007166
ODWD01014132
[ODWD] human metagenome; G_DNA_Buccal mucosa
103
28
-
Asn
GTT
[ENA]
¢þ
>WENV181007160
ODWD01012407
[ODWD] human metagenome; G_DNA_Buccal mucosa
106
35
-
Gln
TTG
[ENA]
¢þ
>WENV181007158
ODWD01010564
[ODWD] human metagenome; G_DNA_Buccal mucosa
107
32
-
Thr
CGT
[ENA]
¢þ
>WENV181007162
ODWD01012891
[ODWD] human metagenome; G_DNA_Buccal mucosa
107
181
+
Thr
CGT
[ENA]
¢þ
>WENV181007200
ODWD01027090
[ODWD] human metagenome; G_DNA_Buccal mucosa
108
36
-
Glu
CTC
[ENA]
¢þ
>WENV181007151
ODWD01008027
[ODWD] human metagenome; G_DNA_Buccal mucosa
112
22
-
Ser
GCT
[ENA]
¢þ
>WENV181007184
ODWD01020545
[ODWD] human metagenome; G_DNA_Buccal mucosa
115
40
-
Lys
CTT
[ENA]
¢þ
>WENV181007198
ODWD01025817
[ODWD] human metagenome; G_DNA_Buccal mucosa
116
41
-
Asp
GTC
[ENA]
¢þ
>WENV181007187
ODWD01021901
[ODWD] human metagenome; G_DNA_Buccal mucosa
122
46
-
Pro
TGG
[ENA]
¢þ
>WENV181007150
ODWD01006648
[ODWD] human metagenome; G_DNA_Buccal mucosa
122
196
+
Asp
GTC
[ENA]
¢þ
>WENV181007181
ODWD01018580
[ODWD] human metagenome; G_DNA_Buccal mucosa
123
198
+
Glu
CTC
[ENA]
¢þ
>WENV181007177
ODWD01014918
[ODWD] human metagenome; G_DNA_Buccal mucosa
124
199
+
Ile
GAT
[ENA]
¢þ
>WENV181007171
ODWD01014285
[ODWD] human metagenome; G_DNA_Buccal mucosa
125
199
+
Thr
TGT
[ENA]
¢þ
>WENV181007127
ODWD01000387
[ODWD] human metagenome; G_DNA_Buccal mucosa
134
206
+
Asp
GTC
[ENA]
¢þ
>WENV181007176
ODWD01014721
[ODWD] human metagenome; G_DNA_Buccal mucosa
134
210
+
Met
CAT
[ENA]
¢þ
>WENV181007161
ODWD01012835
[ODWD] human metagenome; G_DNA_Buccal mucosa
136
209
+
Arg
CCG
[ENA]
¢þ
>WENV181007194
ODWD01024516
[ODWD] human metagenome; G_DNA_Buccal mucosa
137
64
-
Gly
GCC
[ENA]
¢þ
>WENV181007186
ODWD01021607
[ODWD] human metagenome; G_DNA_Buccal mucosa
140
214
+
Ile2
CAT
[ENA]
¢þ
>WENV181007195
ODWD01025457
[ODWD] human metagenome; G_DNA_Buccal mucosa
142
58
-
Leu
TAG
[ENA]
¢þ
>WENV181007154
ODWD01009879
[ODWD] human metagenome; G_DNA_Buccal mucosa
146
221
+
Ile2
CAT
[ENA]
¢þ
>WENV181007168
ODWD01014200
[ODWD] human metagenome; G_DNA_Buccal mucosa
153
80
-
fMet
CAT
[ENA]
¢þ
>WENV181007152
ODWD01009817
[ODWD] human metagenome; G_DNA_Buccal mucosa
158
65
-
Ser
GCT
[ENA]
¢þ
>WENV181007201
ODWD01027101
[ODWD] human metagenome; G_DNA_Buccal mucosa
158
83
-
Val
TAC
[ENA]
¢þ
>WENV181007149
ODWD01005953
[ODWD] human metagenome; G_DNA_Buccal mucosa
158
235
+
fMet
CAT
[ENA]
¢þ
>WENV181007148
ODWD01005863
[ODWD] human metagenome; G_DNA_Buccal mucosa
168
253
+
Leu
CAG
[ENA]
¢þ
>WENV181007156
ODWD01010467
[ODWD] human metagenome; G_DNA_Buccal mucosa
169
254
+
Tyr
GTA
[ENA]
¢þ
>WENV181007174
ODWD01014584
[ODWD] human metagenome; G_DNA_Buccal mucosa
181
253
+
Asn
GTT
[ENA]
¢þ
>WENV181007165
ODWD01014120
[ODWD] human metagenome; G_DNA_Buccal mucosa
184
256
+
Gln
CTG
[ENA]
¢þ
>WENV181007179
ODWD01015842
[ODWD] human metagenome; G_DNA_Buccal mucosa
186
97
-
Ser
GCT
[ENA]
¢þ
>WENV181007192
ODWD01024175
[ODWD] human metagenome; G_DNA_Buccal mucosa
188
113
-
Lys
TTT
[ENA]
¢þ
>WENV181007147
ODWD01005251
[ODWD] human metagenome; G_DNA_Buccal mucosa
189
114
-
Thr
CGT
[ENA]
¢þ
>WENV181007185
ODWD01020705
[ODWD] human metagenome; G_DNA_Buccal mucosa
194
118
-
Met
CAT
[ENA]
¢þ
>WENV181007157
ODWD01010564
[ODWD] human metagenome; G_DNA_Buccal mucosa
202
279
+
Asp
GTC
[ENA]
¢þ
>WENV181007197
ODWD01025817
[ODWD] human metagenome; G_DNA_Buccal mucosa
203
128
-
fMet
CAT
[ENA]
¢þ
>WENV181007138
ODWD01002394
[ODWD] human metagenome; G_DNA_Buccal mucosa
211
136
-
Ile
GAT
[ENA]
¢þ
>WENV181007128
ODWD01000387
[ODWD] human metagenome; G_DNA_Buccal mucosa
231
303
+
Lys
TTT
[ENA]
¢þ
>WENV181007143
ODWD01003603
[ODWD] human metagenome; G_DNA_Buccal mucosa
234
160
-
Ala
TGC
[ENA]
¢þ
>WENV181007167
ODWD01014200
[ODWD] human metagenome; G_DNA_Buccal mucosa
253
164
-
Ser
TGA
[ENA]
¢þ
>WENV181007146
ODWD01005043
[ODWD] human metagenome; G_DNA_Buccal mucosa
281
195
-
Leu
TAA
[ENA]
¢þ
>WENV181007144
ODWD01003965
[ODWD] human metagenome; G_DNA_Buccal mucosa
282
356
+
Ile
GAT
[ENA]
¢þ
>WENV181007141
ODWD01003270
[ODWD] human metagenome; G_DNA_Buccal mucosa
296
386
+
Ser
CGA
[ENA]
¢þ
>WENV181007129
ODWD01000387
[ODWD] human metagenome; G_DNA_Buccal mucosa
308
391
+
Leu
TAG
[ENA]
¢þ
>WENV181007137
ODWD01002394
[ODWD] human metagenome; G_DNA_Buccal mucosa
316
244
-
Gly
TCC
[ENA]
¢þ
>WENV181007142
ODWD01003603
[ODWD] human metagenome; G_DNA_Buccal mucosa
320
246
-
Ile
GAT
[ENA]
¢þ
>WENV181007140
ODWD01002894
[ODWD] human metagenome; G_DNA_Buccal mucosa
327
402
+
Met
CAT
[ENA]
¢þ
>WENV181007139
ODWD01002611
[ODWD] human metagenome; G_DNA_Buccal mucosa
342
415
+
Trp
CCA
[ENA]
¢þ
>WENV181007145
ODWD01003999
[ODWD] human metagenome; G_DNA_Buccal mucosa
353
280
-
Ala
TGC
[ENA]
¢þ
>WENV181007135
ODWD01001598
[ODWD] human metagenome; G_DNA_Buccal mucosa
359
444
+
Leu
CAA
[ENA]
¢þ
>WENV181007136
ODWD01002394
[ODWD] human metagenome; G_DNA_Buccal mucosa
393
321
-
Val
TAC
[ENA]
¢þ
>WENV181007130
ODWD01000387
[ODWD] human metagenome; G_DNA_Buccal mucosa
409
481
+
Thr
TGT
[ENA]
¢þ
>WENV181007131
ODWD01000387
[ODWD] human metagenome; G_DNA_Buccal mucosa
504
575
+
Gly
GCC
[ENA]
¢þ
>WENV181007125
ODWD01000272
[ODWD] human metagenome; G_DNA_Buccal mucosa
547
472
-
Ala
TGC
[ENA]
¢þ
>WENV181007123
ODWD01000118
[ODWD] human metagenome; G_DNA_Buccal mucosa
551
625
+
Ala
TGC
[ENA]
¢þ
>WENV181007132
ODWD01000387
[ODWD] human metagenome; G_DNA_Buccal mucosa
583
668
+
Leu
TAA
[ENA]
¢þ
>WENV181007124
ODWD01000272
[ODWD] human metagenome; G_DNA_Buccal mucosa
677
601
-
Ile
GAT
[ENA]
¢þ
>WENV181007133
ODWD01000387
[ODWD] human metagenome; G_DNA_Buccal mucosa
680
753
+
Arg
ACG
[ENA]
¢þ
>WENV181007134
ODWD01000387
[ODWD] human metagenome; G_DNA_Buccal mucosa
767
842
+
Pro
TGG
[ENA]
¢þ
>WENV181007120
ODWD01000040
[ODWD] human metagenome; G_DNA_Buccal mucosa
1432
1361
-
Glu
TTC
[ENA]
¢þ
>WENV181007119
ODWD01000031
[ODWD] human metagenome; G_DNA_Buccal mucosa
4536
4465
-
Gln
TTG
[ENA]
¢þ
>WENV181007118
ODWD01000031
[ODWD] human metagenome; G_DNA_Buccal mucosa
4626
4546
-
Tyr
GTA
[ENA]
¢þ
>WENV181007122
ODWD01000063
[ODWD] human metagenome; G_DNA_Buccal mucosa
6553
6626
+
Arg
CCG
[ENA]
¢þ
>WENV181007121
ODWD01000047
[ODWD] human metagenome; G_DNA_Buccal mucosa
7266
7194
-
Thr
GGT
[ENA]
¢þ
>WENV181007111
ODWD01000015
[ODWD] human metagenome; G_DNA_Buccal mucosa
8965
9050
+
Leu
AAG
[ENA]
¢þ
>WENV181007104
ODWD01000002
[ODWD] human metagenome; G_DNA_Buccal mucosa
17159
17232
+
Arg
TCT
[ENA]
¢þ
>WENV181007105
ODWD01000002
[ODWD] human metagenome; G_DNA_Buccal mucosa
19669
19740
+
Glu
TTC
[ENA]
¢þ
>WENV181007106
ODWD01000002
[ODWD] human metagenome; G_DNA_Buccal mucosa
19746
19819
+
Asn
GTT
[ENA]
¢þ
>WENV181007117
ODWD01000022
[ODWD] human metagenome; G_DNA_Buccal mucosa
28516
28431
-
Leu
CAA
[ENA]
¢þ
>WENV181007116
ODWD01000022
[ODWD] human metagenome; G_DNA_Buccal mucosa
28597
28524
-
Gln
TTG
[ENA]
¢þ
>WENV181007115
ODWD01000022
[ODWD] human metagenome; G_DNA_Buccal mucosa
28683
28609
-
His
GTG
[ENA]
¢þ
>WENV181007114
ODWD01000022
[ODWD] human metagenome; G_DNA_Buccal mucosa
28768
28696
-
Trp
CCA
[ENA]
¢þ
>WENV181007113
ODWD01000022
[ODWD] human metagenome; G_DNA_Buccal mucosa
28853
28771
-
Tyr
GTA
[ENA]
¢þ
>WENV181007112
ODWD01000016
[ODWD] human metagenome; G_DNA_Buccal mucosa
34237
34308
+
Arg
CCT
[ENA]
¢þ
>WENV181007103
ODWD01000001
[ODWD] human metagenome; G_DNA_Buccal mucosa
37656
37729
+
Cys
GCA
[ENA]
¢þ
>WENV181007109
ODWD01000007
[ODWD] human metagenome; G_DNA_Buccal mucosa
38389
38478
+
Ser
GGA
[ENA]
¢þ
>WENV181007107
ODWD01000005
[ODWD] human metagenome; G_DNA_Buccal mucosa
45244
45319
+
Lys
CTT
[ENA]
¢þ
>WENV181007108
ODWD01000005
[ODWD] human metagenome; G_DNA_Buccal mucosa
46245
46318
+
Lys
CTT
[ENA]
¢þ
>WENV181007110
ODWD01000010
[ODWD] human metagenome; G_DNA_Buccal mucosa
59688
59615
-
Asn
GTT
[ENA]
¢þ
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
View ClustalW result
BACK