This is the navigation skips to jump to main contents
Jump to main contents.
tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
Top
|
Keyword
|
BLAST
|
Download
|
HOW TO USE
tRNA gene List
[ODWM] human metagenome; G_DNA_Posterior fornix
HIT:
45 sequence(s).
Download Sequence
View ClustalW result
The reliable tRNA genes
All candidate tRNA genes
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
>WENV181013032
ODWM01000304
[ODWM] human metagenome; G_DNA_Posterior fornix
58
133
+
Val
TAC
[ENA]
¢þ
>WENV181013022
ODWM01000166
[ODWM] human metagenome; G_DNA_Posterior fornix
62
135
+
Asn
GTT
[ENA]
¢þ
>WENV181013031
ODWM01000204
[ODWM] human metagenome; G_DNA_Posterior fornix
76
2
-
Phe
GAA
[ENA]
¢þ
>WENV181013033
ODWM01000304
[ODWM] human metagenome; G_DNA_Posterior fornix
134
206
+
Lys
TTT
[ENA]
¢þ
>WENV181013013
ODWM01000053
[ODWM] human metagenome; G_DNA_Posterior fornix
136
65
-
Gly
GCC
[ENA]
¢þ
>WENV181013051
ODWM01000540
[ODWM] human metagenome; G_DNA_Posterior fornix
158
66
-
Ser
GGA
[ENA]
¢þ
>WENV181013019
ODWM01000127
[ODWM] human metagenome; G_DNA_Posterior fornix
214
299
+
Leu
AAG
[ENA]
¢þ
>WENV181013034
ODWM01000304
[ODWM] human metagenome; G_DNA_Posterior fornix
221
304
+
Leu
TAG
[ENA]
¢þ
>WENV181013030
ODWM01000204
[ODWM] human metagenome; G_DNA_Posterior fornix
231
156
-
fMet
CAT
[ENA]
¢þ
>WENV181013050
ODWM01000540
[ODWM] human metagenome; G_DNA_Posterior fornix
234
162
-
Asn
GTT
[ENA]
¢þ
>WENV181013045
ODWM01000361
[ODWM] human metagenome; G_DNA_Posterior fornix
256
329
+
Glu
CTC
[ENA]
¢þ
>WENV181013046
ODWM01000361
[ODWM] human metagenome; G_DNA_Posterior fornix
333
405
+
Gln
CTG
[ENA]
¢þ
>WENV181013035
ODWM01000304
[ODWM] human metagenome; G_DNA_Posterior fornix
336
409
+
Thr
TGT
[ENA]
¢þ
>WENV181013042
ODWM01000321
[ODWM] human metagenome; G_DNA_Posterior fornix
381
307
-
Thr
CGT
[ENA]
¢þ
>WENV181013036
ODWM01000304
[ODWM] human metagenome; G_DNA_Posterior fornix
414
485
+
Gly
GCC
[ENA]
¢þ
>WENV181013029
ODWM01000204
[ODWM] human metagenome; G_DNA_Posterior fornix
421
350
-
Glu
TTC
[ENA]
¢þ
>WENV181013037
ODWM01000304
[ODWM] human metagenome; G_DNA_Posterior fornix
497
584
+
Leu
TAA
[ENA]
¢þ
>WENV181013049
ODWM01000495
[ODWM] human metagenome; G_DNA_Posterior fornix
574
483
-
Ser
GCT
[ENA]
¢þ
>WENV181013038
ODWM01000304
[ODWM] human metagenome; G_DNA_Posterior fornix
593
669
+
Arg
ACG
[ENA]
¢þ
>WENV181013048
ODWM01000495
[ODWM] human metagenome; G_DNA_Posterior fornix
649
576
-
Ile
GAT
[ENA]
¢þ
>WENV181013039
ODWM01000304
[ODWM] human metagenome; G_DNA_Posterior fornix
673
746
+
Pro
TGG
[ENA]
¢þ
>WENV181013044
ODWM01000335
[ODWM] human metagenome; G_DNA_Posterior fornix
692
618
-
Ala
TGC
[ENA]
¢þ
>WENV181013047
ODWM01000392
[ODWM] human metagenome; G_DNA_Posterior fornix
747
661
-
Ser
CGA
[ENA]
¢þ
>WENV181013040
ODWM01000304
[ODWM] human metagenome; G_DNA_Posterior fornix
773
848
+
Met
CAT
[ENA]
¢þ
>WENV181013043
ODWM01000335
[ODWM] human metagenome; G_DNA_Posterior fornix
793
720
-
Ile
GAT
[ENA]
¢þ
>WENV181013041
ODWM01000304
[ODWM] human metagenome; G_DNA_Posterior fornix
860
935
+
Ile2
CAT
[ENA]
¢þ
>WENV181013020
ODWM01000139
[ODWM] human metagenome; G_DNA_Posterior fornix
974
902
-
Arg
CCT
[ENA]
¢þ
>WENV181013011
ODWM01000025
[ODWM] human metagenome; G_DNA_Posterior fornix
1188
1271
+
Tyr
GTA
[ENA]
¢þ
>WENV181013012
ODWM01000025
[ODWM] human metagenome; G_DNA_Posterior fornix
1277
1350
+
Gln
TTG
[ENA]
¢þ
>WENV181013028
ODWM01000188
[ODWM] human metagenome; G_DNA_Posterior fornix
1358
1273
-
Leu
CAA
[ENA]
¢þ
>WENV181013027
ODWM01000188
[ODWM] human metagenome; G_DNA_Posterior fornix
1461
1391
-
Cys
GCA
[ENA]
¢þ
>WENV181013026
ODWM01000188
[ODWM] human metagenome; G_DNA_Posterior fornix
1557
1484
-
Gln
TTG
[ENA]
¢þ
>WENV181013018
ODWM01000116
[ODWM] human metagenome; G_DNA_Posterior fornix
1580
1652
+
Gly
CCC
[ENA]
¢þ
>WENV181013025
ODWM01000188
[ODWM] human metagenome; G_DNA_Posterior fornix
1636
1563
-
His
GTG
[ENA]
¢þ
>WENV181013024
ODWM01000188
[ODWM] human metagenome; G_DNA_Posterior fornix
1722
1650
-
Trp
CCA
[ENA]
¢þ
>WENV181013023
ODWM01000188
[ODWM] human metagenome; G_DNA_Posterior fornix
1807
1726
-
Tyr
GTA
[ENA]
¢þ
>WENV181013021
ODWM01000149
[ODWM] human metagenome; G_DNA_Posterior fornix
2302
2227
-
Pro
CGG
[ENA]
¢þ
>WENV181013014
ODWM01000102
[ODWM] human metagenome; G_DNA_Posterior fornix
2679
2752
+
Arg
TCT
[ENA]
¢þ
>WENV181013017
ODWM01000104
[ODWM] human metagenome; G_DNA_Posterior fornix
3165
3091
-
Val
TAC
[ENA]
¢þ
>WENV181013016
ODWM01000104
[ODWM] human metagenome; G_DNA_Posterior fornix
3241
3168
-
Glu
TTC
[ENA]
¢þ
>WENV181013015
ODWM01000104
[ODWM] human metagenome; G_DNA_Posterior fornix
3430
3339
-
Ser
GGA
[ENA]
¢þ
>WENV181013008
ODWM01000003
[ODWM] human metagenome; G_DNA_Posterior fornix
3461
3532
+
Arg
CCG
[ENA]
¢þ
>WENV181013009
ODWM01000008
[ODWM] human metagenome; G_DNA_Posterior fornix
5603
5675
+
Thr
AGT
[ENA]
¢þ
>WENV181013010
ODWM01000014
[ODWM] human metagenome; G_DNA_Posterior fornix
10250
10322
+
Thr
GGT
[ENA]
¢þ
>WENV181013007
ODWM01000001
[ODWM] human metagenome; G_DNA_Posterior fornix
36385
36311
-
Lys
CTT
[ENA]
¢þ
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
View ClustalW result
BACK