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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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|
Keyword
|
BLAST
|
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HOW TO USE
tRNA gene List
[ODXL] human metagenome; G_DNA_Anterior nares
HIT:
80 sequence(s).
Download Sequence
View ClustalW result
The reliable tRNA genes
All candidate tRNA genes
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
>WENV181032245
ODXL01001417
[ODXL] human metagenome; G_DNA_Anterior nares
6
78
+
Thr
TGT
[ENA]
¢þ
>WENV181032227
ODXL01000523
[ODXL] human metagenome; G_DNA_Anterior nares
67
139
+
Val
TAC
[ENA]
¢þ
>WENV181032255
ODXL01001798
[ODXL] human metagenome; G_DNA_Anterior nares
72
154
+
Tyr
GTA
[ENA]
¢þ
>WENV181032210
ODXL01000185
[ODXL] human metagenome; G_DNA_Anterior nares
72
155
+
Tyr
GTA
[ENA]
¢þ
>WENV181032279
ODXL01004940
[ODXL] human metagenome; G_DNA_Anterior nares
80
5
-
Asp
GTC
[ENA]
¢þ
>WENV181032273
ODXL01003594
[ODXL] human metagenome; G_DNA_Anterior nares
82
154
+
Gln
CTG
[ENA]
¢þ
>WENV181032284
ODXL01008115
[ODXL] human metagenome; G_DNA_Anterior nares
82
156
+
Asn
GTT
[ENA]
¢þ
>WENV181032246
ODXL01001417
[ODXL] human metagenome; G_DNA_Anterior nares
94
165
+
Gly
GCC
[ENA]
¢þ
>WENV181032270
ODXL01003115
[ODXL] human metagenome; G_DNA_Anterior nares
96
23
-
Gly
GCC
[ENA]
¢þ
>WENV181032232
ODXL01000620
[ODXL] human metagenome; G_DNA_Anterior nares
100
172
+
Gln
TTG
[ENA]
¢þ
>WENV181032281
ODXL01006255
[ODXL] human metagenome; G_DNA_Anterior nares
109
27
-
Tyr
GTA
[ENA]
¢þ
>WENV181032264
ODXL01002299
[ODXL] human metagenome; G_DNA_Anterior nares
124
197
+
Val
CAC
[ENA]
¢þ
>WENV181032275
ODXL01004142
[ODXL] human metagenome; G_DNA_Anterior nares
136
210
+
Val
TAC
[ENA]
¢þ
>WENV181032283
ODXL01007814
[ODXL] human metagenome; G_DNA_Anterior nares
138
57
-
Leu
TAG
[ENA]
¢þ
>WENV181032280
ODXL01005746
[ODXL] human metagenome; G_DNA_Anterior nares
143
216
+
Ala
GGC
[ENA]
¢þ
>WENV181032228
ODXL01000523
[ODXL] human metagenome; G_DNA_Anterior nares
149
221
+
Lys
TTT
[ENA]
¢þ
>WENV181032256
ODXL01001798
[ODXL] human metagenome; G_DNA_Anterior nares
157
229
+
Trp
CCA
[ENA]
¢þ
>WENV181032282
ODXL01006265
[ODXL] human metagenome; G_DNA_Anterior nares
159
69
-
Ser
GCT
[ENA]
¢þ
>WENV181032211
ODXL01000185
[ODXL] human metagenome; G_DNA_Anterior nares
159
232
+
Gln
TTG
[ENA]
¢þ
>WENV181032276
ODXL01004434
[ODXL] human metagenome; G_DNA_Anterior nares
178
251
+
Gly
CCC
[ENA]
¢þ
>WENV181032244
ODXL01001197
[ODXL] human metagenome; G_DNA_Anterior nares
179
106
-
Lys
CTT
[ENA]
¢þ
>WENV181032278
ODXL01004940
[ODXL] human metagenome; G_DNA_Anterior nares
193
104
-
Ser
TGA
[ENA]
¢þ
>WENV181032247
ODXL01001417
[ODXL] human metagenome; G_DNA_Anterior nares
194
280
+
Leu
TAA
[ENA]
¢þ
>WENV181032208
ODXL01000045
[ODXL] human metagenome; G_DNA_Anterior nares
212
139
-
Ala
TGC
[ENA]
¢þ
>WENV181032274
ODXL01004033
[ODXL] human metagenome; G_DNA_Anterior nares
228
307
+
Gln
TTG
[ENA]
¢þ
>WENV181032257
ODXL01001798
[ODXL] human metagenome; G_DNA_Anterior nares
239
313
+
His
GTG
[ENA]
¢þ
>WENV181032229
ODXL01000523
[ODXL] human metagenome; G_DNA_Anterior nares
245
319
+
Arg
TCG
[ENA]
¢þ
>WENV181032272
ODXL01003483
[ODXL] human metagenome; G_DNA_Anterior nares
255
179
-
Ile
GAT
[ENA]
¢þ
>WENV181032271
ODXL01003444
[ODXL] human metagenome; G_DNA_Anterior nares
259
333
+
Ile2
CAT
[ENA]
¢þ
>WENV181032277
ODXL01004940
[ODXL] human metagenome; G_DNA_Anterior nares
277
206
-
Glu
TTC
[ENA]
¢þ
>WENV181032248
ODXL01001417
[ODXL] human metagenome; G_DNA_Anterior nares
289
364
+
Arg
ACG
[ENA]
¢þ
>WENV181032207
ODXL01000045
[ODXL] human metagenome; G_DNA_Anterior nares
299
225
-
Ile
GAT
[ENA]
¢þ
>WENV181032266
ODXL01002442
[ODXL] human metagenome; G_DNA_Anterior nares
319
245
-
Pro
GGG
[ENA]
¢þ
>WENV181032258
ODXL01001798
[ODXL] human metagenome; G_DNA_Anterior nares
328
401
+
Gln
TTG
[ENA]
¢þ
>WENV181032237
ODXL01000816
[ODXL] human metagenome; G_DNA_Anterior nares
330
255
-
Thr
CGT
[ENA]
¢þ
>WENV181032269
ODXL01003115
[ODXL] human metagenome; G_DNA_Anterior nares
333
262
-
Cys
GCA
[ENA]
¢þ
>WENV181032267
ODXL01002609
[ODXL] human metagenome; G_DNA_Anterior nares
334
261
-
Trp
CCA
[ENA]
¢þ
>WENV181032262
ODXL01001962
[ODXL] human metagenome; G_DNA_Anterior nares
345
272
-
Asn
GTT
[ENA]
¢þ
>WENV181032261
ODXL01001931
[ODXL] human metagenome; G_DNA_Anterior nares
350
426
+
Leu
CAA
[ENA]
¢þ
>WENV181032221
ODXL01000333
[ODXL] human metagenome; G_DNA_Anterior nares
353
429
+
fMet
CAT
[ENA]
¢þ
>WENV181032265
ODXL01002431
[ODXL] human metagenome; G_DNA_Anterior nares
400
326
-
Ile
GAT
[ENA]
¢þ
>WENV181032259
ODXL01001798
[ODXL] human metagenome; G_DNA_Anterior nares
413
485
+
Cys
GCA
[ENA]
¢þ
>WENV181032263
ODXL01002227
[ODXL] human metagenome; G_DNA_Anterior nares
414
501
+
Leu
GAG
[ENA]
¢þ
>WENV181032268
ODXL01002626
[ODXL] human metagenome; G_DNA_Anterior nares
420
347
-
Pro
TGG
[ENA]
¢þ
>WENV181032249
ODXL01001417
[ODXL] human metagenome; G_DNA_Anterior nares
421
494
+
Pro
TGG
[ENA]
¢þ
>WENV181032250
ODXL01001417
[ODXL] human metagenome; G_DNA_Anterior nares
513
588
+
Met
CAT
[ENA]
¢þ
>WENV181032260
ODXL01001798
[ODXL] human metagenome; G_DNA_Anterior nares
513
597
+
Leu
CAA
[ENA]
¢þ
>WENV181032236
ODXL01000779
[ODXL] human metagenome; G_DNA_Anterior nares
591
665
+
Leu
TAA
[ENA]
¢þ
>WENV181032251
ODXL01001417
[ODXL] human metagenome; G_DNA_Anterior nares
606
679
+
Ile2
CAT
[ENA]
¢þ
>WENV181032254
ODXL01001722
[ODXL] human metagenome; G_DNA_Anterior nares
617
689
+
Gln
CTG
[ENA]
¢þ
>WENV181032240
ODXL01000983
[ODXL] human metagenome; G_DNA_Anterior nares
685
759
+
Arg
TCT
[ENA]
¢þ
>WENV181032252
ODXL01001417
[ODXL] human metagenome; G_DNA_Anterior nares
732
802
+
Gly
TCC
[ENA]
¢þ
>WENV181032243
ODXL01001027
[ODXL] human metagenome; G_DNA_Anterior nares
775
848
+
Arg
CCT
[ENA]
¢þ
>WENV181032225
ODXL01000457
[ODXL] human metagenome; G_DNA_Anterior nares
783
709
-
Arg
CCG
[ENA]
¢þ
>WENV181032253
ODXL01001417
[ODXL] human metagenome; G_DNA_Anterior nares
812
887
+
Ile
GAT
[ENA]
¢þ
>WENV181032223
ODXL01000379
[ODXL] human metagenome; G_DNA_Anterior nares
824
909
+
Leu
CAG
[ENA]
¢þ
>WENV181032235
ODXL01000760
[ODXL] human metagenome; G_DNA_Anterior nares
1095
1000
-
SeC
TCA
[ENA]
¢þ
>WENV181032216
ODXL01000286
[ODXL] human metagenome; G_DNA_Anterior nares
1113
1185
+
Thr
GGT
[ENA]
¢þ
>WENV181032241
ODXL01000999
[ODXL] human metagenome; G_DNA_Anterior nares
1224
1298
+
Asp
GTC
[ENA]
¢þ
>WENV181032239
ODXL01000982
[ODXL] human metagenome; G_DNA_Anterior nares
1291
1364
+
Val
TAC
[ENA]
¢þ
>WENV181032242
ODXL01000999
[ODXL] human metagenome; G_DNA_Anterior nares
1352
1425
+
Phe
GAA
[ENA]
¢þ
>WENV181032238
ODXL01000833
[ODXL] human metagenome; G_DNA_Anterior nares
1593
1680
+
Ser
TGA
[ENA]
¢þ
>WENV181032233
ODXL01000623
[ODXL] human metagenome; G_DNA_Anterior nares
1658
1732
+
Gly
TCC
[ENA]
¢þ
>WENV181032234
ODXL01000706
[ODXL] human metagenome; G_DNA_Anterior nares
1857
1930
+
Glu
TTC
[ENA]
¢þ
>WENV181032231
ODXL01000611
[ODXL] human metagenome; G_DNA_Anterior nares
2049
2122
+
Arg
ACG
[ENA]
¢þ
>WENV181032224
ODXL01000439
[ODXL] human metagenome; G_DNA_Anterior nares
2082
2171
+
Ser
GCT
[ENA]
¢þ
>WENV181032230
ODXL01000571
[ODXL] human metagenome; G_DNA_Anterior nares
2264
2190
-
Phe
GAA
[ENA]
¢þ
>WENV181032226
ODXL01000515
[ODXL] human metagenome; G_DNA_Anterior nares
2429
2355
-
Ile2
CAT
[ENA]
¢þ
>WENV181032218
ODXL01000315
[ODXL] human metagenome; G_DNA_Anterior nares
2605
2678
+
Thr
GGT
[ENA]
¢þ
>WENV181032219
ODXL01000315
[ODXL] human metagenome; G_DNA_Anterior nares
2721
2793
+
Met
CAT
[ENA]
¢þ
>WENV181032220
ODXL01000315
[ODXL] human metagenome; G_DNA_Anterior nares
2912
2987
+
Trp
CCA
[ENA]
¢þ
>WENV181032222
ODXL01000341
[ODXL] human metagenome; G_DNA_Anterior nares
3004
2931
-
Thr
TGT
[ENA]
¢þ
>WENV181032212
ODXL01000215
[ODXL] human metagenome; G_DNA_Anterior nares
3071
2997
-
Pro
CGG
[ENA]
¢þ
>WENV181032209
ODXL01000136
[ODXL] human metagenome; G_DNA_Anterior nares
3369
3295
-
Ala
TGC
[ENA]
¢þ
>WENV181032217
ODXL01000312
[ODXL] human metagenome; G_DNA_Anterior nares
3373
3300
-
Lys
TTT
[ENA]
¢þ
>WENV181032214
ODXL01000244
[ODXL] human metagenome; G_DNA_Anterior nares
3686
3589
-
SeC
TCA
[ENA]
¢þ
>WENV181032215
ODXL01000257
[ODXL] human metagenome; G_DNA_Anterior nares
3744
3826
+
Tyr
GTA
[ENA]
¢þ
>WENV181032213
ODXL01000236
[ODXL] human metagenome; G_DNA_Anterior nares
3992
4066
+
Pro
TGG
[ENA]
¢þ
>WENV181032206
ODXL01000020
[ODXL] human metagenome; G_DNA_Anterior nares
4776
4858
+
Leu
TAG
[ENA]
¢þ
>WENV181032205
ODXL01000012
[ODXL] human metagenome; G_DNA_Anterior nares
8102
8175
+
Ala
GGC
[ENA]
¢þ
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
View ClustalW result
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