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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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|
Keyword
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HOW TO USE
tRNA gene List
[ODXR] human metagenome; G_DNA_Anterior nares
HIT:
127 sequence(s).
Download Sequence
View ClustalW result
The reliable tRNA genes
All candidate tRNA genes
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
>WENV181040431
ODXR01022844
[ODXR] human metagenome; G_DNA_Anterior nares
3
78
+
Ala
TGC
[ENA]
¢þ
>WENV181040407
ODXR01014522
[ODXR] human metagenome; G_DNA_Anterior nares
6
77
+
Cys
GCA
[ENA]
¢þ
>WENV181040424
ODXR01018825
[ODXR] human metagenome; G_DNA_Anterior nares
8
81
+
His
GTG
[ENA]
¢þ
>WENV181040426
ODXR01020310
[ODXR] human metagenome; G_DNA_Anterior nares
18
92
+
Asn
GTT
[ENA]
¢þ
>WENV181040415
ODXR01016596
[ODXR] human metagenome; G_DNA_Anterior nares
25
98
+
Gly
TCC
[ENA]
¢þ
>WENV181040414
ODXR01016298
[ODXR] human metagenome; G_DNA_Anterior nares
49
124
+
Phe
GAA
[ENA]
¢þ
>WENV181040382
ODXR01004278
[ODXR] human metagenome; G_DNA_Anterior nares
56
131
+
Asp
GTC
[ENA]
¢þ
>WENV181040409
ODXR01015021
[ODXR] human metagenome; G_DNA_Anterior nares
59
142
+
Tyr
GTA
[ENA]
¢þ
>WENV181040427
ODXR01021714
[ODXR] human metagenome; G_DNA_Anterior nares
65
138
+
Ile2
CAT
[ENA]
¢þ
>WENV181040419
ODXR01017401
[ODXR] human metagenome; G_DNA_Anterior nares
71
145
+
Met
CAT
[ENA]
¢þ
>WENV181040408
ODXR01014522
[ODXR] human metagenome; G_DNA_Anterior nares
78
150
+
Val
GAC
[ENA]
¢þ
>WENV181040412
ODXR01015554
[ODXR] human metagenome; G_DNA_Anterior nares
80
5
-
Pro
TGG
[ENA]
¢þ
>WENV181040428
ODXR01022378
[ODXR] human metagenome; G_DNA_Anterior nares
82
8
-
Asp
GTC
[ENA]
¢þ
>WENV181040416
ODXR01017106
[ODXR] human metagenome; G_DNA_Anterior nares
83
9
-
Glu
TTC
[ENA]
¢þ
>WENV181040418
ODXR01017318
[ODXR] human metagenome; G_DNA_Anterior nares
86
13
-
Gly
GCC
[ENA]
¢þ
>WENV181040411
ODXR01015198
[ODXR] human metagenome; G_DNA_Anterior nares
91
18
-
Gly
CCC
[ENA]
¢þ
>WENV181040362
ODXR01000539
[ODXR] human metagenome; G_DNA_Anterior nares
94
10
-
Leu
CAG
[ENA]
¢þ
>WENV181040346
ODXR01000083
[ODXR] human metagenome; G_DNA_Anterior nares
94
21
-
Lys
CTT
[ENA]
¢þ
>WENV181040391
ODXR01005182
[ODXR] human metagenome; G_DNA_Anterior nares
96
22
-
Leu
TAA
[ENA]
¢þ
>WENV181040413
ODXR01015656
[ODXR] human metagenome; G_DNA_Anterior nares
101
27
-
Pro
GGG
[ENA]
¢þ
>WENV181040423
ODXR01018688
[ODXR] human metagenome; G_DNA_Anterior nares
104
31
-
Arg
CCT
[ENA]
¢þ
>WENV181040373
ODXR01001431
[ODXR] human metagenome; G_DNA_Anterior nares
110
28
-
Tyr
GTA
[ENA]
¢þ
>WENV181040383
ODXR01004287
[ODXR] human metagenome; G_DNA_Anterior nares
112
182
+
Met
CAT
[ENA]
¢þ
>WENV181040392
ODXR01005841
[ODXR] human metagenome; G_DNA_Anterior nares
114
187
+
Lys
CTT
[ENA]
¢þ
>WENV181040398
ODXR01009940
[ODXR] human metagenome; G_DNA_Anterior nares
119
205
+
Leu
GAG
[ENA]
¢þ
>WENV181040430
ODXR01022821
[ODXR] human metagenome; G_DNA_Anterior nares
122
48
-
Asp
GTC
[ENA]
¢þ
>WENV181040404
ODXR01012749
[ODXR] human metagenome; G_DNA_Anterior nares
124
198
+
Ile2
CAT
[ENA]
¢þ
>WENV181040422
ODXR01018176
[ODXR] human metagenome; G_DNA_Anterior nares
137
211
+
Ile2
CAT
[ENA]
¢þ
>WENV181040393
ODXR01006000
[ODXR] human metagenome; G_DNA_Anterior nares
137
211
+
Val
TAC
[ENA]
¢þ
>WENV181040402
ODXR01010238
[ODXR] human metagenome; G_DNA_Anterior nares
141
51
-
Ser
GCT
[ENA]
¢þ
>WENV181040425
ODXR01020274
[ODXR] human metagenome; G_DNA_Anterior nares
141
67
-
Pro
TGG
[ENA]
¢þ
>WENV181040420
ODXR01017442
[ODXR] human metagenome; G_DNA_Anterior nares
141
214
+
Arg
TCT
[ENA]
¢þ
>WENV181040429
ODXR01022668
[ODXR] human metagenome; G_DNA_Anterior nares
143
70
-
Pro
TGG
[ENA]
¢þ
>WENV181040410
ODXR01015021
[ODXR] human metagenome; G_DNA_Anterior nares
147
221
+
Gln
TTG
[ENA]
¢þ
>WENV181040351
ODXR01000102
[ODXR] human metagenome; G_DNA_Anterior nares
153
82
-
Cys
GCA
[ENA]
¢þ
>WENV181040390
ODXR01005145
[ODXR] human metagenome; G_DNA_Anterior nares
153
226
+
Arg
CCT
[ENA]
¢þ
>WENV181040386
ODXR01004568
[ODXR] human metagenome; G_DNA_Anterior nares
157
231
+
Asp
GTC
[ENA]
¢þ
>WENV181040401
ODXR01010180
[ODXR] human metagenome; G_DNA_Anterior nares
167
77
-
Ser
GGA
[ENA]
¢þ
>WENV181040325
ODXR01000016
[ODXR] human metagenome; G_DNA_Anterior nares
180
105
-
His
GTG
[ENA]
¢þ
>WENV181040345
ODXR01000067
[ODXR] human metagenome; G_DNA_Anterior nares
180
254
+
Val
CAC
[ENA]
¢þ
>WENV181040406
ODXR01014465
[ODXR] human metagenome; G_DNA_Anterior nares
184
108
-
fMet
CAT
[ENA]
¢þ
>WENV181040363
ODXR01000674
[ODXR] human metagenome; G_DNA_Anterior nares
185
260
+
Glu
CTC
[ENA]
¢þ
>WENV181040355
ODXR01000288
[ODXR] human metagenome; G_DNA_Anterior nares
187
99
-
Ser
TGA
[ENA]
¢þ
>WENV181040396
ODXR01008627
[ODXR] human metagenome; G_DNA_Anterior nares
189
268
+
Gln
TTG
[ENA]
¢þ
>WENV181040332
ODXR01000032
[ODXR] human metagenome; G_DNA_Anterior nares
192
116
-
fMet
CAT
[ENA]
¢þ
>WENV181040314
ODXR01000004
[ODXR] human metagenome; G_DNA_Anterior nares
193
119
-
Pro
GGG
[ENA]
¢þ
>WENV181040417
ODXR01017149
[ODXR] human metagenome; G_DNA_Anterior nares
212
131
-
Tyr
GTA
[ENA]
¢þ
>WENV181040405
ODXR01014443
[ODXR] human metagenome; G_DNA_Anterior nares
212
137
-
Thr
TGT
[ENA]
¢þ
>WENV181040399
ODXR01009940
[ODXR] human metagenome; G_DNA_Anterior nares
228
301
+
Gly
TCC
[ENA]
¢þ
>WENV181040338
ODXR01000045
[ODXR] human metagenome; G_DNA_Anterior nares
241
159
-
Tyr
GTA
[ENA]
¢þ
>WENV181040421
ODXR01018029
[ODXR] human metagenome; G_DNA_Anterior nares
243
171
-
Gly
TCC
[ENA]
¢þ
>WENV181040353
ODXR01000261
[ODXR] human metagenome; G_DNA_Anterior nares
247
158
-
Ser
CGA
[ENA]
¢þ
>WENV181040387
ODXR01004568
[ODXR] human metagenome; G_DNA_Anterior nares
250
323
+
Phe
GAA
[ENA]
¢þ
>WENV181040350
ODXR01000102
[ODXR] human metagenome; G_DNA_Anterior nares
259
184
-
Gly
GCC
[ENA]
¢þ
>WENV181040340
ODXR01000048
[ODXR] human metagenome; G_DNA_Anterior nares
265
192
-
Arg
ACG
[ENA]
¢þ
>WENV181040395
ODXR01008437
[ODXR] human metagenome; G_DNA_Anterior nares
269
195
-
Val
TAC
[ENA]
¢þ
>WENV181040310
ODXR01000002
[ODXR] human metagenome; G_DNA_Anterior nares
275
202
-
Ala
TGC
[ENA]
¢þ
>WENV181040400
ODXR01010180
[ODXR] human metagenome; G_DNA_Anterior nares
292
219
-
Glu
TTC
[ENA]
¢þ
>WENV181040397
ODXR01008920
[ODXR] human metagenome; G_DNA_Anterior nares
308
237
-
Gln
TTG
[ENA]
¢þ
>WENV181040394
ODXR01007254
[ODXR] human metagenome; G_DNA_Anterior nares
313
239
-
Leu
CAA
[ENA]
¢þ
>WENV181040403
ODXR01011664
[ODXR] human metagenome; G_DNA_Anterior nares
316
243
-
Trp
CCA
[ENA]
¢þ
>WENV181040372
ODXR01001393
[ODXR] human metagenome; G_DNA_Anterior nares
361
276
-
Ser
GGA
[ENA]
¢þ
>WENV181040309
ODXR01000002
[ODXR] human metagenome; G_DNA_Anterior nares
361
285
-
Ile
GAT
[ENA]
¢þ
>WENV181040349
ODXR01000102
[ODXR] human metagenome; G_DNA_Anterior nares
369
297
-
Val
GAC
[ENA]
¢þ
>WENV181040388
ODXR01004857
[ODXR] human metagenome; G_DNA_Anterior nares
397
308
-
Leu
GAG
[ENA]
¢þ
>WENV181040378
ODXR01002693
[ODXR] human metagenome; G_DNA_Anterior nares
415
507
+
Ser
TGA
[ENA]
¢þ
>WENV181040374
ODXR01001531
[ODXR] human metagenome; G_DNA_Anterior nares
422
497
+
Thr
CGT
[ENA]
¢þ
>WENV181040385
ODXR01004498
[ODXR] human metagenome; G_DNA_Anterior nares
449
536
+
Ser
CGA
[ENA]
¢þ
>WENV181040380
ODXR01003466
[ODXR] human metagenome; G_DNA_Anterior nares
463
388
-
Arg
TCT
[ENA]
¢þ
>WENV181040384
ODXR01004317
[ODXR] human metagenome; G_DNA_Anterior nares
465
382
-
Leu
TAG
[ENA]
¢þ
>WENV181040371
ODXR01001201
[ODXR] human metagenome; G_DNA_Anterior nares
482
556
+
Ile
GAT
[ENA]
¢þ
>WENV181040381
ODXR01004155
[ODXR] human metagenome; G_DNA_Anterior nares
486
411
-
Trp
CCA
[ENA]
¢þ
>WENV181040348
ODXR01000102
[ODXR] human metagenome; G_DNA_Anterior nares
497
422
-
Gly
GCC
[ENA]
¢þ
>WENV181040389
ODXR01004928
[ODXR] human metagenome; G_DNA_Anterior nares
507
424
-
Leu
CAG
[ENA]
¢þ
>WENV181040379
ODXR01002693
[ODXR] human metagenome; G_DNA_Anterior nares
519
592
+
fMet
CAT
[ENA]
¢þ
>WENV181040364
ODXR01000819
[ODXR] human metagenome; G_DNA_Anterior nares
529
604
+
Val
TAC
[ENA]
¢þ
>WENV181040334
ODXR01000039
[ODXR] human metagenome; G_DNA_Anterior nares
554
469
-
Leu
CAG
[ENA]
¢þ
>WENV181040376
ODXR01001656
[ODXR] human metagenome; G_DNA_Anterior nares
593
669
+
Ile
GAT
[ENA]
¢þ
>WENV181040369
ODXR01000930
[ODXR] human metagenome; G_DNA_Anterior nares
595
677
+
Tyr
GTA
[ENA]
¢þ
>WENV181040375
ODXR01001630
[ODXR] human metagenome; G_DNA_Anterior nares
601
676
+
His
GTG
[ENA]
¢þ
>WENV181040365
ODXR01000819
[ODXR] human metagenome; G_DNA_Anterior nares
611
686
+
Thr
TGT
[ENA]
¢þ
>WENV181040361
ODXR01000481
[ODXR] human metagenome; G_DNA_Anterior nares
622
694
+
Gln
TTG
[ENA]
¢þ
>WENV181040366
ODXR01000819
[ODXR] human metagenome; G_DNA_Anterior nares
692
766
+
Lys
TTT
[ENA]
¢þ
>WENV181040377
ODXR01001656
[ODXR] human metagenome; G_DNA_Anterior nares
696
769
+
Ala
TGC
[ENA]
¢þ
>WENV181040367
ODXR01000819
[ODXR] human metagenome; G_DNA_Anterior nares
870
958
+
Leu
TAA
[ENA]
¢þ
>WENV181040370
ODXR01000930
[ODXR] human metagenome; G_DNA_Anterior nares
878
951
+
Thr
GGT
[ENA]
¢þ
>WENV181040358
ODXR01000437
[ODXR] human metagenome; G_DNA_Anterior nares
878
952
+
Ala
TGC
[ENA]
¢þ
>WENV181040354
ODXR01000280
[ODXR] human metagenome; G_DNA_Anterior nares
903
817
-
Ser
TGA
[ENA]
¢þ
>WENV181040368
ODXR01000819
[ODXR] human metagenome; G_DNA_Anterior nares
971
1045
+
Arg
ACG
[ENA]
¢þ
>WENV181040359
ODXR01000437
[ODXR] human metagenome; G_DNA_Anterior nares
1044
1126
+
Tyr
GTA
[ENA]
¢þ
>WENV181040360
ODXR01000437
[ODXR] human metagenome; G_DNA_Anterior nares
1169
1253
+
Ser
TGA
[ENA]
¢þ
>WENV181040352
ODXR01000110
[ODXR] human metagenome; G_DNA_Anterior nares
1214
1290
+
Pro
CGG
[ENA]
¢þ
>WENV181040356
ODXR01000329
[ODXR] human metagenome; G_DNA_Anterior nares
1262
1191
-
Gly
TCC
[ENA]
¢þ
>WENV181040357
ODXR01000358
[ODXR] human metagenome; G_DNA_Anterior nares
1268
1338
+
Val
TAC
[ENA]
¢þ
>WENV181040347
ODXR01000087
[ODXR] human metagenome; G_DNA_Anterior nares
1459
1534
+
Arg
TCG
[ENA]
¢þ
>WENV181040336
ODXR01000042
[ODXR] human metagenome; G_DNA_Anterior nares
1730
1656
-
Leu
TAA
[ENA]
¢þ
>WENV181040342
ODXR01000055
[ODXR] human metagenome; G_DNA_Anterior nares
1847
1922
+
Thr
GGT
[ENA]
¢þ
>WENV181040343
ODXR01000055
[ODXR] human metagenome; G_DNA_Anterior nares
1971
2044
+
Met
CAT
[ENA]
¢þ
>WENV181040344
ODXR01000055
[ODXR] human metagenome; G_DNA_Anterior nares
2180
2253
+
Trp
CCA
[ENA]
¢þ
>WENV181040324
ODXR01000016
[ODXR] human metagenome; G_DNA_Anterior nares
3569
3494
-
Arg
TCT
[ENA]
¢þ
>WENV181040330
ODXR01000024
[ODXR] human metagenome; G_DNA_Anterior nares
3856
3782
-
Leu
CAA
[ENA]
¢þ
>WENV181040339
ODXR01000048
[ODXR] human metagenome; G_DNA_Anterior nares
6712
6624
-
Ser
GCT
[ENA]
¢þ
>WENV181040316
ODXR01000006
[ODXR] human metagenome; G_DNA_Anterior nares
10612
10537
-
Arg
CCT
[ENA]
¢þ
>WENV181040341
ODXR01000049
[ODXR] human metagenome; G_DNA_Anterior nares
10730
10804
+
Ile2
CAT
[ENA]
¢þ
>WENV181040337
ODXR01000044
[ODXR] human metagenome; G_DNA_Anterior nares
14248
14323
+
Val
TAC
[ENA]
¢þ
>WENV181040335
ODXR01000042
[ODXR] human metagenome; G_DNA_Anterior nares
14903
14975
+
Gln
TTG
[ENA]
¢þ
>WENV181040319
ODXR01000012
[ODXR] human metagenome; G_DNA_Anterior nares
14940
15013
+
Ala
GGC
[ENA]
¢þ
>WENV181040333
ODXR01000033
[ODXR] human metagenome; G_DNA_Anterior nares
25223
25150
-
Glu
CTC
[ENA]
¢þ
>WENV181040331
ODXR01000030
[ODXR] human metagenome; G_DNA_Anterior nares
26909
26982
+
Gly
CCC
[ENA]
¢þ
>WENV181040323
ODXR01000016
[ODXR] human metagenome; G_DNA_Anterior nares
29125
29053
-
Gly
TCC
[ENA]
¢þ
>WENV181040322
ODXR01000016
[ODXR] human metagenome; G_DNA_Anterior nares
30227
30301
+
Pro
TGG
[ENA]
¢þ
>WENV181040321
ODXR01000013
[ODXR] human metagenome; G_DNA_Anterior nares
35654
35727
+
Thr
TGT
[ENA]
¢þ
>WENV181040311
ODXR01000003
[ODXR] human metagenome; G_DNA_Anterior nares
38328
38422
+
SeC
TCA
[ENA]
¢þ
>WENV181040320
ODXR01000012
[ODXR] human metagenome; G_DNA_Anterior nares
39844
39926
+
Leu
TAG
[ENA]
¢þ
>WENV181040327
ODXR01000018
[ODXR] human metagenome; G_DNA_Anterior nares
47578
47651
+
Lys
TTT
[ENA]
¢þ
>WENV181040328
ODXR01000018
[ODXR] human metagenome; G_DNA_Anterior nares
48097
48172
+
Glu
TTC
[ENA]
¢þ
>WENV181040326
ODXR01000017
[ODXR] human metagenome; G_DNA_Anterior nares
48154
48239
+
Ser
TGA
[ENA]
¢þ
>WENV181040329
ODXR01000018
[ODXR] human metagenome; G_DNA_Anterior nares
48208
48282
+
Asp
GTC
[ENA]
¢þ
>WENV181040313
ODXR01000004
[ODXR] human metagenome; G_DNA_Anterior nares
58269
58355
+
Leu
GAG
[ENA]
¢þ
>WENV181040317
ODXR01000009
[ODXR] human metagenome; G_DNA_Anterior nares
78610
78682
+
Gln
CTG
[ENA]
¢þ
>WENV181040318
ODXR01000009
[ODXR] human metagenome; G_DNA_Anterior nares
78720
78793
+
Glu
CTC
[ENA]
¢þ
>WENV181040308
ODXR01000001
[ODXR] human metagenome; G_DNA_Anterior nares
80722
80647
-
Thr
CGT
[ENA]
¢þ
>WENV181040305
ODXR01000001
[ODXR] human metagenome; G_DNA_Anterior nares
109830
109904
+
Pro
CGG
[ENA]
¢þ
>WENV181040315
ODXR01000005
[ODXR] human metagenome; G_DNA_Anterior nares
114055
113982
-
Asn
GTT
[ENA]
¢þ
>WENV181040312
ODXR01000003
[ODXR] human metagenome; G_DNA_Anterior nares
117137
117063
-
Arg
CCG
[ENA]
¢þ
>WENV181040306
ODXR01000001
[ODXR] human metagenome; G_DNA_Anterior nares
136137
136225
+
Ser
GGA
[ENA]
¢þ
>WENV181040307
ODXR01000001
[ODXR] human metagenome; G_DNA_Anterior nares
154148
154060
-
Ser
CGA
[ENA]
¢þ
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
View ClustalW result
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