This is the navigation skips to jump to main contents
Jump to main contents.
tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
Top
|
Keyword
|
BLAST
|
Download
|
HOW TO USE
tRNA gene List
[ODYW] human gut metagenome; human gut
HIT:
32 sequence(s).
Download Sequence
View ClustalW result
The reliable tRNA genes
All candidate tRNA genes
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
>WENV181066185
ODYW01006583
[ODYW] human gut metagenome; human gut
30
105
+
Lys
CTT
[ENA]
¢þ
>WENV181066190
ODYW01008321
[ODYW] human gut metagenome; human gut
37
112
+
Thr
TGT
[ENA]
¢þ
>WENV181066182
ODYW01005002
[ODYW] human gut metagenome; human gut
39
121
+
Leu
TAG
[ENA]
¢þ
>WENV181066181
ODYW01004363
[ODYW] human gut metagenome; human gut
41
124
+
Tyr
GTA
[ENA]
¢þ
>WENV181066193
ODYW01011399
[ODYW] human gut metagenome; human gut
47
122
+
Lys
CTT
[ENA]
¢þ
>WENV181066189
ODYW01008264
[ODYW] human gut metagenome; human gut
70
144
+
Asp
GTC
[ENA]
¢þ
>WENV181066179
ODYW01003565
[ODYW] human gut metagenome; human gut
71
143
+
Glu
TTC
[ENA]
¢þ
>WENV181066187
ODYW01007359
[ODYW] human gut metagenome; human gut
91
184
+
Ser
CGA
[ENA]
¢þ
>WENV181066172
ODYW01001384
[ODYW] human gut metagenome; human gut
108
180
+
Gln
TTG
[ENA]
¢þ
>WENV181066166
ODYW01000253
[ODYW] human gut metagenome; human gut
127
202
+
Ala
TGC
[ENA]
¢þ
>WENV181066168
ODYW01000689
[ODYW] human gut metagenome; human gut
128
203
+
Lys
CTT
[ENA]
¢þ
>WENV181066194
ODYW01012200
[ODYW] human gut metagenome; human gut
130
46
-
Leu
CAA
[ENA]
¢þ
>WENV181066195
ODYW01012546
[ODYW] human gut metagenome; human gut
136
62
-
Phe
GAA
[ENA]
¢þ
>WENV181066175
ODYW01002549
[ODYW] human gut metagenome; human gut
137
63
-
Thr
TGT
[ENA]
¢þ
>WENV181066191
ODYW01008321
[ODYW] human gut metagenome; human gut
140
223
+
Tyr
GTA
[ENA]
¢þ
>WENV181066184
ODYW01005959
[ODYW] human gut metagenome; human gut
143
218
+
Ala
GGC
[ENA]
¢þ
>WENV181066180
ODYW01004212
[ODYW] human gut metagenome; human gut
146
71
-
Asn
GTT
[ENA]
¢þ
>WENV181066192
ODYW01010348
[ODYW] human gut metagenome; human gut
151
75
-
Arg
TCT
[ENA]
¢þ
>WENV181066178
ODYW01003226
[ODYW] human gut metagenome; human gut
151
78
-
Pro
CGG
[ENA]
¢þ
>WENV181066183
ODYW01005337
[ODYW] human gut metagenome; human gut
168
93
-
Gly
GCC
[ENA]
¢þ
>WENV181066186
ODYW01007084
[ODYW] human gut metagenome; human gut
168
93
-
Thr
TGT
[ENA]
¢þ
>WENV181066188
ODYW01007882
[ODYW] human gut metagenome; human gut
171
97
-
Thr
TGT
[ENA]
¢þ
>WENV181066171
ODYW01000816
[ODYW] human gut metagenome; human gut
174
90
-
Leu
CAG
[ENA]
¢þ
>WENV181066173
ODYW01001384
[ODYW] human gut metagenome; human gut
185
259
+
Lys
TTT
[ENA]
¢þ
>WENV181066176
ODYW01002918
[ODYW] human gut metagenome; human gut
193
119
-
Ile2
CAT
[ENA]
¢þ
>WENV181066167
ODYW01000253
[ODYW] human gut metagenome; human gut
226
302
+
Ile
GAT
[ENA]
¢þ
>WENV181066174
ODYW01002081
[ODYW] human gut metagenome; human gut
231
155
-
Ile
GAT
[ENA]
¢þ
>WENV181066177
ODYW01003226
[ODYW] human gut metagenome; human gut
237
164
-
Phe
GAA
[ENA]
¢þ
>WENV181066169
ODYW01000689
[ODYW] human gut metagenome; human gut
249
323
+
Glu
CTC
[ENA]
¢þ
>WENV181066170
ODYW01000816
[ODYW] human gut metagenome; human gut
275
202
-
Gly
GCC
[ENA]
¢þ
>WENV181066165
ODYW01000076
[ODYW] human gut metagenome; human gut
572
498
-
Ala
TGC
[ENA]
¢þ
>WENV181066164
ODYW01000076
[ODYW] human gut metagenome; human gut
663
589
-
Ile
GAT
[ENA]
¢þ
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
View ClustalW result
BACK