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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA gene List
[ODZA] human gut metagenome; human gut
HIT:
18 sequence(s).
Download Sequence
View ClustalW result
The reliable tRNA genes
All candidate tRNA genes
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
>WENV181066274
ODZA01003434
[ODZA] human gut metagenome; human gut
41
122
+
Leu
TAG
[ENA]
¢þ
>WENV181066272
ODZA01002757
[ODZA] human gut metagenome; human gut
42
132
+
Leu
GAG
[ENA]
¢þ
>WENV181066269
ODZA01001877
[ODZA] human gut metagenome; human gut
48
121
+
Ala
GGC
[ENA]
¢þ
>WENV181066275
ODZA01005459
[ODZA] human gut metagenome; human gut
63
136
+
Gly
CCC
[ENA]
¢þ
>WENV181066265
ODZA01000770
[ODZA] human gut metagenome; human gut
74
146
+
Gln
TTG
[ENA]
¢þ
>WENV181066276
ODZA01006286
[ODZA] human gut metagenome; human gut
93
17
-
Arg
ACG
[ENA]
¢þ
>WENV181066266
ODZA01000907
[ODZA] human gut metagenome; human gut
124
197
+
Ala
GGC
[ENA]
¢þ
>WENV181066273
ODZA01002932
[ODZA] human gut metagenome; human gut
125
52
-
Val
CAC
[ENA]
¢þ
>WENV181066262
ODZA01000563
[ODZA] human gut metagenome; human gut
127
55
-
Asp
GTC
[ENA]
¢þ
>WENV181066263
ODZA01000659
[ODZA] human gut metagenome; human gut
128
202
+
Ala
TGC
[ENA]
¢þ
>WENV181066264
ODZA01000695
[ODZA] human gut metagenome; human gut
134
61
-
Gly
GCC
[ENA]
¢þ
>WENV181066271
ODZA01002489
[ODZA] human gut metagenome; human gut
154
80
-
Thr
TGT
[ENA]
¢þ
>WENV181066270
ODZA01001994
[ODZA] human gut metagenome; human gut
170
95
-
Lys
TTT
[ENA]
¢þ
>WENV181066268
ODZA01001610
[ODZA] human gut metagenome; human gut
184
99
-
Ser
GGA
[ENA]
¢þ
>WENV181066267
ODZA01001043
[ODZA] human gut metagenome; human gut
194
120
-
Leu
CAA
[ENA]
¢þ
>WENV181066261
ODZA01000563
[ODZA] human gut metagenome; human gut
202
130
-
Val
TAC
[ENA]
¢þ
>WENV181066260
ODZA01000112
[ODZA] human gut metagenome; human gut
297
210
-
Ser
GCT
[ENA]
¢þ
>WENV181066259
ODZA01000067
[ODZA] human gut metagenome; human gut
319
245
-
Arg
TCT
[ENA]
¢þ
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
View ClustalW result
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