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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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HOW TO USE
tRNA gene List
[ODZH] human gut metagenome; human gut
HIT:
11 sequence(s).
Download Sequence
View ClustalW result
The reliable tRNA genes
All candidate tRNA genes
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
>WENV181066369
ODZH01003815
[ODZH] human gut metagenome; human gut
77
2
-
Arg
TCT
[ENA]
¢þ
>WENV181066363
ODZH01001487
[ODZH] human gut metagenome; human gut
91
17
-
Val
TAC
[ENA]
¢þ
>WENV181066359
ODZH01000090
[ODZH] human gut metagenome; human gut
93
167
+
Ala
TGC
[ENA]
¢þ
>WENV181066364
ODZH01002100
[ODZH] human gut metagenome; human gut
125
42
-
Tyr
GTA
[ENA]
¢þ
>WENV181066365
ODZH01002496
[ODZH] human gut metagenome; human gut
126
47
-
Leu
CAA
[ENA]
¢þ
>WENV181066361
ODZH01001411
[ODZH] human gut metagenome; human gut
142
67
-
fMet
CAT
[ENA]
¢þ
>WENV181066366
ODZH01002616
[ODZH] human gut metagenome; human gut
150
75
-
Ile
GAT
[ENA]
¢þ
>WENV181066367
ODZH01002849
[ODZH] human gut metagenome; human gut
160
86
-
Arg
CCG
[ENA]
¢þ
>WENV181066368
ODZH01003815
[ODZH] human gut metagenome; human gut
168
98
-
Gly
TCC
[ENA]
¢þ
>WENV181066362
ODZH01001487
[ODZH] human gut metagenome; human gut
207
132
-
Asp
GTC
[ENA]
¢þ
>WENV181066360
ODZH01001411
[ODZH] human gut metagenome; human gut
236
162
-
Thr
TGT
[ENA]
¢þ
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
View ClustalW result
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