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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
Top
|
Keyword
|
BLAST
|
Download
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HOW TO USE
tRNA gene List
[OEAI] human metagenome; G_DNA_Stool
HIT:
62 sequence(s).
Download Sequence
View ClustalW result
The reliable tRNA genes
All candidate tRNA genes
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
>WENV181071248
OEAI01006125
[OEAI] human metagenome; G_DNA_Stool
31
104
+
Val
CAC
[ENA]
¢þ
>WENV181071258
OEAI01009834
[OEAI] human metagenome; G_DNA_Stool
33
106
+
Gln
TTG
[ENA]
¢þ
>WENV181071240
OEAI01002415
[OEAI] human metagenome; G_DNA_Stool
36
108
+
Val
GAC
[ENA]
¢þ
>WENV181071250
OEAI01006723
[OEAI] human metagenome; G_DNA_Stool
43
117
+
Glu
TTC
[ENA]
¢þ
>WENV181071225
OEAI01001199
[OEAI] human metagenome; G_DNA_Stool
75
157
+
Tyr
GTA
[ENA]
¢þ
>WENV181071235
OEAI01001582
[OEAI] human metagenome; G_DNA_Stool
81
7
-
Val
TAC
[ENA]
¢þ
>WENV181071255
OEAI01008646
[OEAI] human metagenome; G_DNA_Stool
92
167
+
Thr
CGT
[ENA]
¢þ
>WENV181071257
OEAI01009597
[OEAI] human metagenome; G_DNA_Stool
101
25
-
fMet
CAT
[ENA]
¢þ
>WENV181071243
OEAI01002634
[OEAI] human metagenome; G_DNA_Stool
101
28
-
Arg
ACG
[ENA]
¢þ
>WENV181071254
OEAI01008183
[OEAI] human metagenome; G_DNA_Stool
110
34
-
Arg
ACG
[ENA]
¢þ
>WENV181071259
OEAI01009834
[OEAI] human metagenome; G_DNA_Stool
118
190
+
Cys
GCA
[ENA]
¢þ
>WENV181071221
OEAI01000726
[OEAI] human metagenome; G_DNA_Stool
120
45
-
Glu
TTC
[ENA]
¢þ
>WENV181071251
OEAI01006723
[OEAI] human metagenome; G_DNA_Stool
122
197
+
Val
TAC
[ENA]
¢þ
>WENV181071230
OEAI01001346
[OEAI] human metagenome; G_DNA_Stool
129
58
-
Cys
GCA
[ENA]
¢þ
>WENV181071198
OEAI01000023
[OEAI] human metagenome; G_DNA_Stool
135
207
+
Asn
GTT
[ENA]
¢þ
>WENV181071252
OEAI01007775
[OEAI] human metagenome; G_DNA_Stool
138
64
-
Pro
GGG
[ENA]
¢þ
>WENV181071256
OEAI01008728
[OEAI] human metagenome; G_DNA_Stool
146
73
-
Gly
TCC
[ENA]
¢þ
>WENV181071237
OEAI01001721
[OEAI] human metagenome; G_DNA_Stool
173
247
+
Ala
TGC
[ENA]
¢þ
>WENV181071242
OEAI01002602
[OEAI] human metagenome; G_DNA_Stool
178
253
+
Thr
TGT
[ENA]
¢þ
>WENV181071249
OEAI01006503
[OEAI] human metagenome; G_DNA_Stool
180
88
-
Ser
TGA
[ENA]
¢þ
>WENV181071213
OEAI01000429
[OEAI] human metagenome; G_DNA_Stool
196
122
-
Ala
TGC
[ENA]
¢þ
>WENV181071253
OEAI01008183
[OEAI] human metagenome; G_DNA_Stool
211
123
-
Leu
TAA
[ENA]
¢þ
>WENV181071223
OEAI01001032
[OEAI] human metagenome; G_DNA_Stool
217
290
+
Trp
CCA
[ENA]
¢þ
>WENV181071247
OEAI01003947
[OEAI] human metagenome; G_DNA_Stool
226
142
-
Leu
TAG
[ENA]
¢þ
>WENV181071229
OEAI01001346
[OEAI] human metagenome; G_DNA_Stool
230
157
-
Gly
GCC
[ENA]
¢þ
>WENV181071245
OEAI01003389
[OEAI] human metagenome; G_DNA_Stool
231
303
+
Thr
GGT
[ENA]
¢þ
>WENV181071246
OEAI01003907
[OEAI] human metagenome; G_DNA_Stool
234
310
+
Ile2
CAT
[ENA]
¢þ
>WENV181071232
OEAI01001403
[OEAI] human metagenome; G_DNA_Stool
244
169
-
Glu
CTC
[ENA]
¢þ
>WENV181071233
OEAI01001408
[OEAI] human metagenome; G_DNA_Stool
263
346
+
Leu
CAG
[ENA]
¢þ
>WENV181071220
OEAI01000726
[OEAI] human metagenome; G_DNA_Stool
274
199
-
Ala
GGC
[ENA]
¢þ
>WENV181071241
OEAI01002487
[OEAI] human metagenome; G_DNA_Stool
279
364
+
Ser
TGA
[ENA]
¢þ
>WENV181071244
OEAI01002917
[OEAI] human metagenome; G_DNA_Stool
296
370
+
Lys
CTT
[ENA]
¢þ
>WENV181071219
OEAI01000693
[OEAI] human metagenome; G_DNA_Stool
315
239
-
Pro
CGG
[ENA]
¢þ
>WENV181071239
OEAI01001853
[OEAI] human metagenome; G_DNA_Stool
334
249
-
Ser
TGA
[ENA]
¢þ
>WENV181071226
OEAI01001199
[OEAI] human metagenome; G_DNA_Stool
358
431
+
Thr
GGT
[ENA]
¢þ
>WENV181071228
OEAI01001268
[OEAI] human metagenome; G_DNA_Stool
366
441
+
Trp
CCA
[ENA]
¢þ
>WENV181071203
OEAI01000061
[OEAI] human metagenome; G_DNA_Stool
381
311
-
Met
CAT
[ENA]
¢þ
>WENV181071208
OEAI01000316
[OEAI] human metagenome; G_DNA_Stool
384
458
+
Asp
GTC
[ENA]
¢þ
>WENV181071238
OEAI01001853
[OEAI] human metagenome; G_DNA_Stool
440
358
-
Tyr
GTA
[ENA]
¢þ
>WENV181071231
OEAI01001403
[OEAI] human metagenome; G_DNA_Stool
452
380
-
Gln
CTG
[ENA]
¢þ
>WENV181071222
OEAI01001011
[OEAI] human metagenome; G_DNA_Stool
469
393
-
fMet
CAT
[ENA]
¢þ
>WENV181071224
OEAI01001097
[OEAI] human metagenome; G_DNA_Stool
484
557
+
Asn
GTT
[ENA]
¢þ
>WENV181071236
OEAI01001663
[OEAI] human metagenome; G_DNA_Stool
492
407
-
Ser
GGA
[ENA]
¢þ
>WENV181071227
OEAI01001199
[OEAI] human metagenome; G_DNA_Stool
496
570
+
Met
CAT
[ENA]
¢þ
>WENV181071209
OEAI01000316
[OEAI] human metagenome; G_DNA_Stool
519
594
+
Phe
GAA
[ENA]
¢þ
>WENV181071211
OEAI01000353
[OEAI] human metagenome; G_DNA_Stool
529
604
+
Lys
TTT
[ENA]
¢þ
>WENV181071234
OEAI01001520
[OEAI] human metagenome; G_DNA_Stool
545
470
-
Asn
GTT
[ENA]
¢þ
>WENV181071201
OEAI01000059
[OEAI] human metagenome; G_DNA_Stool
548
618
+
Val
TAC
[ENA]
¢þ
>WENV181071218
OEAI01000587
[OEAI] human metagenome; G_DNA_Stool
555
481
-
Lys
TTT
[ENA]
¢þ
>WENV181071216
OEAI01000538
[OEAI] human metagenome; G_DNA_Stool
632
715
+
Leu
TAG
[ENA]
¢þ
>WENV181071215
OEAI01000494
[OEAI] human metagenome; G_DNA_Stool
709
782
+
Ala
GGC
[ENA]
¢þ
>WENV181071217
OEAI01000553
[OEAI] human metagenome; G_DNA_Stool
815
890
+
His
GTG
[ENA]
¢þ
>WENV181071206
OEAI01000151
[OEAI] human metagenome; G_DNA_Stool
941
1016
+
Arg
TCT
[ENA]
¢þ
>WENV181071214
OEAI01000482
[OEAI] human metagenome; G_DNA_Stool
1069
996
-
Arg
CCT
[ENA]
¢þ
>WENV181071212
OEAI01000353
[OEAI] human metagenome; G_DNA_Stool
1209
1136
-
Thr
TGT
[ENA]
¢þ
>WENV181071210
OEAI01000318
[OEAI] human metagenome; G_DNA_Stool
1263
1188
-
Ala
TGC
[ENA]
¢þ
>WENV181071207
OEAI01000219
[OEAI] human metagenome; G_DNA_Stool
1359
1284
-
Thr
CGT
[ENA]
¢þ
>WENV181071202
OEAI01000061
[OEAI] human metagenome; G_DNA_Stool
1607
1680
+
His
GTG
[ENA]
¢þ
>WENV181071199
OEAI01000038
[OEAI] human metagenome; G_DNA_Stool
1632
1716
+
Leu
TAG
[ENA]
¢þ
>WENV181071205
OEAI01000143
[OEAI] human metagenome; G_DNA_Stool
1643
1570
-
Gly
TCC
[ENA]
¢þ
>WENV181071204
OEAI01000063
[OEAI] human metagenome; G_DNA_Stool
1966
2053
+
Ser
CGA
[ENA]
¢þ
>WENV181071200
OEAI01000038
[OEAI] human metagenome; G_DNA_Stool
2093
2168
+
Arg
TCG
[ENA]
¢þ
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
View ClustalW result
BACK