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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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HOW TO USE
tRNA gene List
[OECH] human gut metagenome; human gut
HIT:
14 sequence(s).
Download Sequence
View ClustalW result
The reliable tRNA genes
All candidate tRNA genes
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
>WENV181098380
OECH01005534
[OECH] human gut metagenome; human gut
12
85
+
Gln
TTG
[ENA]
¢þ
>WENV181098370
OECH01000246
[OECH] human gut metagenome; human gut
33
105
+
Asn
GTT
[ENA]
¢þ
>WENV181098378
OECH01005347
[OECH] human gut metagenome; human gut
45
121
+
Asp
GTC
[ENA]
¢þ
>WENV181098377
OECH01005327
[OECH] human gut metagenome; human gut
104
29
-
Asp
GTC
[ENA]
¢þ
>WENV181098371
OECH01000246
[OECH] human gut metagenome; human gut
110
183
+
Glu
TTC
[ENA]
¢þ
>WENV181098381
OECH01005534
[OECH] human gut metagenome; human gut
119
191
+
Lys
TTT
[ENA]
¢þ
>WENV181098375
OECH01001527
[OECH] human gut metagenome; human gut
122
52
-
Gly
TCC
[ENA]
¢þ
>WENV181098379
OECH01005347
[OECH] human gut metagenome; human gut
131
205
+
Thr
TGT
[ENA]
¢þ
>WENV181098382
OECH01005897
[OECH] human gut metagenome; human gut
137
63
-
Met
CAT
[ENA]
¢þ
>WENV181098383
OECH01006655
[OECH] human gut metagenome; human gut
149
76
-
Ile
GAT
[ENA]
¢þ
>WENV181098376
OECH01002323
[OECH] human gut metagenome; human gut
157
230
+
Arg
CCT
[ENA]
¢þ
>WENV181098372
OECH01000246
[OECH] human gut metagenome; human gut
217
289
+
Thr
TGT
[ENA]
¢þ
>WENV181098374
OECH01001527
[OECH] human gut metagenome; human gut
236
160
-
Pro
TGG
[ENA]
¢þ
>WENV181098373
OECH01000246
[OECH] human gut metagenome; human gut
293
376
+
Tyr
GTA
[ENA]
¢þ
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
View ClustalW result
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