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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA gene List
[OECR] human gut metagenome; human gut
HIT:
22 sequence(s).
Download Sequence
View ClustalW result
The reliable tRNA genes
All candidate tRNA genes
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
>WENV181101358
OECR01015104
[OECR] human gut metagenome; human gut
37
110
+
Lys
CTT
[ENA]
¢þ
>WENV181101355
OECR01008511
[OECR] human gut metagenome; human gut
55
130
+
Ala
TGC
[ENA]
¢þ
>WENV181101353
OECR01005393
[OECR] human gut metagenome; human gut
70
146
+
Ile
GAT
[ENA]
¢þ
>WENV181101357
OECR01014446
[OECR] human gut metagenome; human gut
71
146
+
Ile
GAT
[ENA]
¢þ
>WENV181101350
OECR01003623
[OECR] human gut metagenome; human gut
96
13
-
Leu
TAG
[ENA]
¢þ
>WENV181101352
OECR01005227
[OECR] human gut metagenome; human gut
104
31
-
Gly
GCC
[ENA]
¢þ
>WENV181101347
OECR01002964
[OECR] human gut metagenome; human gut
129
211
+
Leu
TAG
[ENA]
¢þ
>WENV181101354
OECR01005894
[OECR] human gut metagenome; human gut
136
207
+
Gln
TTG
[ENA]
¢þ
>WENV181101345
OECR01002050
[OECR] human gut metagenome; human gut
159
88
-
Cys
GCA
[ENA]
¢þ
>WENV181101359
OECR01015291
[OECR] human gut metagenome; human gut
169
99
-
Gly
TCC
[ENA]
¢þ
>WENV181101351
OECR01005227
[OECR] human gut metagenome; human gut
185
110
-
Asp
GTC
[ENA]
¢þ
>WENV181101356
OECR01010249
[OECR] human gut metagenome; human gut
185
112
-
Gly
GCC
[ENA]
¢þ
>WENV181101342
OECR01000903
[OECR] human gut metagenome; human gut
188
116
-
Thr
TGT
[ENA]
¢þ
>WENV181101349
OECR01003623
[OECR] human gut metagenome; human gut
195
111
-
Tyr
GTA
[ENA]
¢þ
>WENV181101346
OECR01002325
[OECR] human gut metagenome; human gut
210
284
+
Asp
GTC
[ENA]
¢þ
>WENV181101344
OECR01002050
[OECR] human gut metagenome; human gut
272
200
-
Glu
TTC
[ENA]
¢þ
>WENV181101348
OECR01003623
[OECR] human gut metagenome; human gut
275
201
-
Thr
TGT
[ENA]
¢þ
>WENV181101341
OECR01000903
[OECR] human gut metagenome; human gut
299
218
-
Tyr
GTA
[ENA]
¢þ
>WENV181101343
OECR01002050
[OECR] human gut metagenome; human gut
350
278
-
Asn
GTT
[ENA]
¢þ
>WENV181101340
OECR01000903
[OECR] human gut metagenome; human gut
384
311
-
Val
TAC
[ENA]
¢þ
>WENV181101339
OECR01000903
[OECR] human gut metagenome; human gut
467
392
-
Asp
GTC
[ENA]
¢þ
>WENV181101338
OECR01000115
[OECR] human gut metagenome; human gut
1168
1241
+
Asn
GTT
[ENA]
¢þ
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
View ClustalW result
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