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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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|
Keyword
|
BLAST
|
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|
HOW TO USE
tRNA gene List
[OEDH] human gut metagenome; human gut
HIT:
127 sequence(s).
Download Sequence
View ClustalW result
The reliable tRNA genes
All candidate tRNA genes
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
>WENV181104291
OEDH01021402
[OEDH] human gut metagenome; human gut
12
87
+
Lys
TTT
[ENA]
¢þ
>WENV181104258
OEDH01007650
[OEDH] human gut metagenome; human gut
14
86
+
Trp
CCA
[ENA]
¢þ
>WENV181104304
OEDH01027166
[OEDH] human gut metagenome; human gut
19
92
+
Pro
CGG
[ENA]
¢þ
>WENV181104309
OEDH01028496
[OEDH] human gut metagenome; human gut
21
97
+
Asp
GTC
[ENA]
¢þ
>WENV181104307
OEDH01028456
[OEDH] human gut metagenome; human gut
24
99
+
Val
TAC
[ENA]
¢þ
>WENV181104252
OEDH01007274
[OEDH] human gut metagenome; human gut
26
101
+
Thr
CGT
[ENA]
¢þ
>WENV181104290
OEDH01020942
[OEDH] human gut metagenome; human gut
29
115
+
Ser
TGA
[ENA]
¢þ
>WENV181104294
OEDH01021526
[OEDH] human gut metagenome; human gut
33
109
+
Arg
TCT
[ENA]
¢þ
>WENV181104226
OEDH01003188
[OEDH] human gut metagenome; human gut
37
108
+
Gln
TTG
[ENA]
¢þ
>WENV181104302
OEDH01026282
[OEDH] human gut metagenome; human gut
42
116
+
Pro
CGG
[ENA]
¢þ
>WENV181104206
OEDH01000924
[OEDH] human gut metagenome; human gut
42
117
+
Met
CAT
[ENA]
¢þ
>WENV181104296
OEDH01021940
[OEDH] human gut metagenome; human gut
43
130
+
Leu
TAA
[ENA]
¢þ
>WENV181104311
OEDH01028690
[OEDH] human gut metagenome; human gut
49
123
+
His
GTG
[ENA]
¢þ
>WENV181104287
OEDH01019784
[OEDH] human gut metagenome; human gut
50
125
+
Pro
GGG
[ENA]
¢þ
>WENV181104244
OEDH01005773
[OEDH] human gut metagenome; human gut
51
125
+
Met
CAT
[ENA]
¢þ
>WENV181104288
OEDH01019970
[OEDH] human gut metagenome; human gut
52
125
+
Lys
CTT
[ENA]
¢þ
>WENV181104275
OEDH01015733
[OEDH] human gut metagenome; human gut
56
130
+
Phe
GAA
[ENA]
¢þ
>WENV181104312
OEDH01028800
[OEDH] human gut metagenome; human gut
73
2
-
Glu
TTC
[ENA]
¢þ
>WENV181104233
OEDH01003760
[OEDH] human gut metagenome; human gut
78
3
-
Val
CAC
[ENA]
¢þ
>WENV181104216
OEDH01001567
[OEDH] human gut metagenome; human gut
78
151
+
Glu
CTC
[ENA]
¢þ
>WENV181104251
OEDH01006880
[OEDH] human gut metagenome; human gut
78
152
+
Asp
GTC
[ENA]
¢þ
>WENV181104279
OEDH01016519
[OEDH] human gut metagenome; human gut
79
152
+
Gly
CCC
[ENA]
¢þ
>WENV181104295
OEDH01021894
[OEDH] human gut metagenome; human gut
80
154
+
Thr
TGT
[ENA]
¢þ
>WENV181104241
OEDH01005700
[OEDH] human gut metagenome; human gut
83
159
+
Met
CAT
[ENA]
¢þ
>WENV181104306
OEDH01028281
[OEDH] human gut metagenome; human gut
84
155
+
Gln
TTG
[ENA]
¢þ
>WENV181104297
OEDH01022053
[OEDH] human gut metagenome; human gut
86
12
-
Arg
CCG
[ENA]
¢þ
>WENV181104220
OEDH01001602
[OEDH] human gut metagenome; human gut
90
15
-
His
GTG
[ENA]
¢þ
>WENV181104222
OEDH01002398
[OEDH] human gut metagenome; human gut
90
17
-
Glu
TTC
[ENA]
¢þ
>WENV181104299
OEDH01024781
[OEDH] human gut metagenome; human gut
93
18
-
Trp
CCA
[ENA]
¢þ
>WENV181104266
OEDH01009847
[OEDH] human gut metagenome; human gut
93
167
+
Thr
GGT
[ENA]
¢þ
>WENV181104292
OEDH01021402
[OEDH] human gut metagenome; human gut
95
169
+
Cys
GCA
[ENA]
¢þ
>WENV181104227
OEDH01003330
[OEDH] human gut metagenome; human gut
95
170
+
Pro
TGG
[ENA]
¢þ
>WENV181104259
OEDH01007650
[OEDH] human gut metagenome; human gut
96
170
+
His
GTG
[ENA]
¢þ
>WENV181104315
OEDH01030242
[OEDH] human gut metagenome; human gut
97
170
+
Asn
GTT
[ENA]
¢þ
>WENV181104272
OEDH01014905
[OEDH] human gut metagenome; human gut
99
8
-
Ser
GGA
[ENA]
¢þ
>WENV181104310
OEDH01028496
[OEDH] human gut metagenome; human gut
101
176
+
Thr
GGT
[ENA]
¢þ
>WENV181104267
OEDH01010852
[OEDH] human gut metagenome; human gut
103
28
-
Lys
CTT
[ENA]
¢þ
>WENV181104202
OEDH01000725
[OEDH] human gut metagenome; human gut
105
30
-
fMet
CAT
[ENA]
¢þ
>WENV181104305
OEDH01027456
[OEDH] human gut metagenome; human gut
106
32
-
Arg
CCT
[ENA]
¢þ
>WENV181104300
OEDH01025868
[OEDH] human gut metagenome; human gut
108
32
-
Arg
CCG
[ENA]
¢þ
>WENV181104314
OEDH01029744
[OEDH] human gut metagenome; human gut
108
35
-
Ala
GGC
[ENA]
¢þ
>WENV181104254
OEDH01007386
[OEDH] human gut metagenome; human gut
109
182
+
Gln
CTG
[ENA]
¢þ
>WENV181104284
OEDH01017912
[OEDH] human gut metagenome; human gut
110
183
+
Lys
TTT
[ENA]
¢þ
>WENV181104308
OEDH01028456
[OEDH] human gut metagenome; human gut
113
188
+
Thr
TGT
[ENA]
¢þ
>WENV181104286
OEDH01018808
[OEDH] human gut metagenome; human gut
118
192
+
Ala
GGC
[ENA]
¢þ
>WENV181104289
OEDH01020310
[OEDH] human gut metagenome; human gut
118
193
+
Phe
GAA
[ENA]
¢þ
>WENV181104270
OEDH01013533
[OEDH] human gut metagenome; human gut
125
37
-
Ser
GCT
[ENA]
¢þ
>WENV181104301
OEDH01026013
[OEDH] human gut metagenome; human gut
128
205
+
Thr
CGT
[ENA]
¢þ
>WENV181104245
OEDH01005777
[OEDH] human gut metagenome; human gut
129
222
+
Ser
GCT
[ENA]
¢þ
>WENV181104207
OEDH01000924
[OEDH] human gut metagenome; human gut
130
205
+
Ile2
CAT
[ENA]
¢þ
>WENV181104277
OEDH01016047
[OEDH] human gut metagenome; human gut
132
50
-
Tyr
GTA
[ENA]
¢þ
>WENV181104274
OEDH01015672
[OEDH] human gut metagenome; human gut
133
208
+
Phe
GAA
[ENA]
¢þ
>WENV181104261
OEDH01007802
[OEDH] human gut metagenome; human gut
136
222
+
Leu
CAG
[ENA]
¢þ
>WENV181104303
OEDH01026725
[OEDH] human gut metagenome; human gut
144
72
-
Glu
CTC
[ENA]
¢þ
>WENV181104293
OEDH01021430
[OEDH] human gut metagenome; human gut
146
71
-
Met
CAT
[ENA]
¢þ
>WENV181104271
OEDH01013608
[OEDH] human gut metagenome; human gut
146
74
-
Glu
TTC
[ENA]
¢þ
>WENV181104218
OEDH01001581
[OEDH] human gut metagenome; human gut
149
59
-
Leu
GAG
[ENA]
¢þ
>WENV181104246
OEDH01006003
[OEDH] human gut metagenome; human gut
151
226
+
Thr
GGT
[ENA]
¢þ
>WENV181104283
OEDH01017788
[OEDH] human gut metagenome; human gut
153
77
-
Ile
GAT
[ENA]
¢þ
>WENV181104268
OEDH01011922
[OEDH] human gut metagenome; human gut
159
81
-
Leu
CAA
[ENA]
¢þ
>WENV181104250
OEDH01006397
[OEDH] human gut metagenome; human gut
160
86
-
Val
TAC
[ENA]
¢þ
>WENV181104238
OEDH01004920
[OEDH] human gut metagenome; human gut
160
87
-
Ala
TGC
[ENA]
¢þ
>WENV181104237
OEDH01004415
[OEDH] human gut metagenome; human gut
161
236
+
Ala
GGC
[ENA]
¢þ
>WENV181104236
OEDH01003998
[OEDH] human gut metagenome; human gut
164
90
-
Gly
GCC
[ENA]
¢þ
>WENV181104281
OEDH01017089
[OEDH] human gut metagenome; human gut
164
90
-
Met
CAT
[ENA]
¢þ
>WENV181104196
OEDH01000482
[OEDH] human gut metagenome; human gut
166
84
-
Tyr
GTA
[ENA]
¢þ
>WENV181104257
OEDH01007634
[OEDH] human gut metagenome; human gut
167
81
-
Leu
TAA
[ENA]
¢þ
>WENV181104221
OEDH01002398
[OEDH] human gut metagenome; human gut
167
93
-
Asn
GTT
[ENA]
¢þ
>WENV181104253
OEDH01007274
[OEDH] human gut metagenome; human gut
169
250
+
Leu
TAG
[ENA]
¢þ
>WENV181104219
OEDH01001602
[OEDH] human gut metagenome; human gut
172
97
-
Arg
TCT
[ENA]
¢þ
>WENV181104248
OEDH01006127
[OEDH] human gut metagenome; human gut
175
99
-
Asn
GTT
[ENA]
¢þ
>WENV181104260
OEDH01007650
[OEDH] human gut metagenome; human gut
175
248
+
Gln
TTG
[ENA]
¢þ
>WENV181104228
OEDH01003330
[OEDH] human gut metagenome; human gut
176
246
+
Gly
TCC
[ENA]
¢þ
>WENV181104313
OEDH01029744
[OEDH] human gut metagenome; human gut
182
109
-
Ala
TGC
[ENA]
¢þ
>WENV181104232
OEDH01003760
[OEDH] human gut metagenome; human gut
182
110
-
Val
GAC
[ENA]
¢þ
>WENV181104298
OEDH01023717
[OEDH] human gut metagenome; human gut
182
111
-
Gln
TTG
[ENA]
¢þ
>WENV181104278
OEDH01016135
[OEDH] human gut metagenome; human gut
189
116
-
Pro
GGG
[ENA]
¢þ
>WENV181104217
OEDH01001567
[OEDH] human gut metagenome; human gut
189
263
+
Gln
CTG
[ENA]
¢þ
>WENV181104262
OEDH01008211
[OEDH] human gut metagenome; human gut
194
266
+
Val
TAC
[ENA]
¢þ
>WENV181104280
OEDH01016940
[OEDH] human gut metagenome; human gut
200
125
-
Lys
CTT
[ENA]
¢þ
>WENV181104265
OEDH01009353
[OEDH] human gut metagenome; human gut
200
126
-
Ala
TGC
[ENA]
¢þ
>WENV181104243
OEDH01005744
[OEDH] human gut metagenome; human gut
202
127
-
Arg
CCT
[ENA]
¢þ
>WENV181104264
OEDH01008810
[OEDH] human gut metagenome; human gut
202
128
-
Lys
CTT
[ENA]
¢þ
>WENV181104198
OEDH01000571
[OEDH] human gut metagenome; human gut
204
278
+
Thr
TGT
[ENA]
¢þ
>WENV181104201
OEDH01000725
[OEDH] human gut metagenome; human gut
205
133
-
Thr
TGT
[ENA]
¢þ
>WENV181104273
OEDH01015196
[OEDH] human gut metagenome; human gut
206
132
-
Cys
GCA
[ENA]
¢þ
>WENV181104263
OEDH01008243
[OEDH] human gut metagenome; human gut
210
134
-
fMet
CAT
[ENA]
¢þ
>WENV181104276
OEDH01016047
[OEDH] human gut metagenome; human gut
211
137
-
Val
TAC
[ENA]
¢þ
>WENV181104255
OEDH01007386
[OEDH] human gut metagenome; human gut
214
289
+
Pro
CGG
[ENA]
¢þ
>WENV181104285
OEDH01018106
[OEDH] human gut metagenome; human gut
223
150
-
Pro
CGG
[ENA]
¢þ
>WENV181104208
OEDH01000924
[OEDH] human gut metagenome; human gut
223
314
+
Ser
TGA
[ENA]
¢þ
>WENV181104213
OEDH01000993
[OEDH] human gut metagenome; human gut
228
304
+
Arg
CCT
[ENA]
¢þ
>WENV181104205
OEDH01000895
[OEDH] human gut metagenome; human gut
229
138
-
Ser
CGA
[ENA]
¢þ
>WENV181104282
OEDH01017788
[OEDH] human gut metagenome; human gut
232
157
-
Ala
TGC
[ENA]
¢þ
>WENV181104240
OEDH01005534
[OEDH] human gut metagenome; human gut
243
168
-
Pro
TGG
[ENA]
¢þ
>WENV181104269
OEDH01013340
[OEDH] human gut metagenome; human gut
243
170
-
Gly
TCC
[ENA]
¢þ
>WENV181104223
OEDH01002436
[OEDH] human gut metagenome; human gut
244
316
+
Ala
TGC
[ENA]
¢þ
>WENV181104235
OEDH01003998
[OEDH] human gut metagenome; human gut
245
170
-
Phe
GAA
[ENA]
¢þ
>WENV181104242
OEDH01005700
[OEDH] human gut metagenome; human gut
251
322
+
Glu
TTC
[ENA]
¢þ
>WENV181104256
OEDH01007634
[OEDH] human gut metagenome; human gut
253
170
-
Tyr
GTA
[ENA]
¢þ
>WENV181104249
OEDH01006397
[OEDH] human gut metagenome; human gut
265
190
-
Asp
GTC
[ENA]
¢þ
>WENV181104229
OEDH01003330
[OEDH] human gut metagenome; human gut
272
347
+
Arg
TCT
[ENA]
¢þ
>WENV181104195
OEDH01000482
[OEDH] human gut metagenome; human gut
288
216
-
Thr
TGT
[ENA]
¢þ
>WENV181104247
OEDH01006127
[OEDH] human gut metagenome; human gut
289
215
-
Glu
CTC
[ENA]
¢þ
>WENV181104231
OEDH01003760
[OEDH] human gut metagenome; human gut
292
221
-
Cys
GCA
[ENA]
¢þ
>WENV181104200
OEDH01000725
[OEDH] human gut metagenome; human gut
303
231
-
Glu
TTC
[ENA]
¢þ
>WENV181104239
OEDH01005534
[OEDH] human gut metagenome; human gut
323
250
-
Arg
ACG
[ENA]
¢þ
>WENV181104209
OEDH01000924
[OEDH] human gut metagenome; human gut
323
396
+
fMet
CAT
[ENA]
¢þ
>WENV181104234
OEDH01003998
[OEDH] human gut metagenome; human gut
329
253
-
Asp
GTC
[ENA]
¢þ
>WENV181104224
OEDH01002436
[OEDH] human gut metagenome; human gut
353
427
+
Ile
GAT
[ENA]
¢þ
>WENV181104194
OEDH01000482
[OEDH] human gut metagenome; human gut
381
308
-
Val
TAC
[ENA]
¢þ
>WENV181104192
OEDH01000082
[OEDH] human gut metagenome; human gut
393
468
+
Ala
TGC
[ENA]
¢þ
>WENV181104230
OEDH01003760
[OEDH] human gut metagenome; human gut
395
322
-
Gly
GCC
[ENA]
¢þ
>WENV181104210
OEDH01000924
[OEDH] human gut metagenome; human gut
399
473
+
Phe
GAA
[ENA]
¢þ
>WENV181104199
OEDH01000725
[OEDH] human gut metagenome; human gut
429
358
-
Asn
GTT
[ENA]
¢þ
>WENV181104225
OEDH01002984
[OEDH] human gut metagenome; human gut
442
368
-
Arg
ACG
[ENA]
¢þ
>WENV181104215
OEDH01001258
[OEDH] human gut metagenome; human gut
471
395
-
Val
CAC
[ENA]
¢þ
>WENV181104193
OEDH01000482
[OEDH] human gut metagenome; human gut
481
407
-
Asp
GTC
[ENA]
¢þ
>WENV181104204
OEDH01000758
[OEDH] human gut metagenome; human gut
483
408
-
Lys
CTT
[ENA]
¢þ
>WENV181104211
OEDH01000924
[OEDH] human gut metagenome; human gut
484
556
+
Gly
TCC
[ENA]
¢þ
>WENV181104203
OEDH01000758
[OEDH] human gut metagenome; human gut
561
487
-
Glu
CTC
[ENA]
¢þ
>WENV181104212
OEDH01000924
[OEDH] human gut metagenome; human gut
588
663
+
Ile
GAT
[ENA]
¢þ
>WENV181104214
OEDH01001256
[OEDH] human gut metagenome; human gut
637
552
-
Tyr
GTA
[ENA]
¢þ
>WENV181104190
OEDH01000018
[OEDH] human gut metagenome; human gut
718
793
+
Ala
TGC
[ENA]
¢þ
>WENV181104197
OEDH01000514
[OEDH] human gut metagenome; human gut
745
673
-
Gln
CTG
[ENA]
¢þ
>WENV181104191
OEDH01000018
[OEDH] human gut metagenome; human gut
797
873
+
Ile
GAT
[ENA]
¢þ
>WENV181104189
OEDH01000004
[OEDH] human gut metagenome; human gut
3039
2965
-
Ala
TGC
[ENA]
¢þ
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
View ClustalW result
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