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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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|
Keyword
|
BLAST
|
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HOW TO USE
tRNA gene List
[OEDJ] human gut metagenome; human gut
HIT:
17 sequence(s).
Download Sequence
View ClustalW result
The reliable tRNA genes
All candidate tRNA genes
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
>WENV181104324
OEDJ01004417
[OEDJ] human gut metagenome; human gut
10
94
+
Leu
GAG
[ENA]
¢þ
>WENV181104320
OEDJ01000466
[OEDJ] human gut metagenome; human gut
35
109
+
Ala
TGC
[ENA]
¢þ
>WENV181104332
OEDJ01010151
[OEDJ] human gut metagenome; human gut
91
17
-
Asp
GTC
[ENA]
¢þ
>WENV181104325
OEDJ01004417
[OEDJ] human gut metagenome; human gut
110
183
+
Gly
GCC
[ENA]
¢þ
>WENV181104331
OEDJ01009066
[OEDJ] human gut metagenome; human gut
117
44
-
Pro
CGG
[ENA]
¢þ
>WENV181104328
OEDJ01004886
[OEDJ] human gut metagenome; human gut
118
45
-
Lys
CTT
[ENA]
¢þ
>WENV181104329
OEDJ01006643
[OEDJ] human gut metagenome; human gut
127
202
+
Lys
CTT
[ENA]
¢þ
>WENV181104330
OEDJ01007096
[OEDJ] human gut metagenome; human gut
132
206
+
Met
CAT
[ENA]
¢þ
>WENV181104322
OEDJ01001949
[OEDJ] human gut metagenome; human gut
150
224
+
His
GTG
[ENA]
¢þ
>WENV181104319
OEDJ01000150
[OEDJ] human gut metagenome; human gut
161
85
-
Ile
GAT
[ENA]
¢þ
>WENV181104323
OEDJ01002430
[OEDJ] human gut metagenome; human gut
173
247
+
Thr
TGT
[ENA]
¢þ
>WENV181104326
OEDJ01004606
[OEDJ] human gut metagenome; human gut
197
124
-
Lys
TTT
[ENA]
¢þ
>WENV181104327
OEDJ01004886
[OEDJ] human gut metagenome; human gut
211
122
-
Ser
GCT
[ENA]
¢þ
>WENV181104318
OEDJ01000150
[OEDJ] human gut metagenome; human gut
240
165
-
Ala
TGC
[ENA]
¢þ
>WENV181104321
OEDJ01001788
[OEDJ] human gut metagenome; human gut
305
223
-
Leu
TAG
[ENA]
¢þ
>WENV181104317
OEDJ01000023
[OEDJ] human gut metagenome; human gut
633
559
-
Ala
TGC
[ENA]
¢þ
>WENV181104316
OEDJ01000023
[OEDJ] human gut metagenome; human gut
797
723
-
Ile
GAT
[ENA]
¢þ
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
View ClustalW result
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