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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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|
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HOW TO USE
tRNA gene List
[OEES] human metagenome; G_DNA_Anterior nares
HIT:
43 sequence(s).
Download Sequence
View ClustalW result
The reliable tRNA genes
All candidate tRNA genes
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
>WENV181115895
OEES01004242
[OEES] human metagenome; G_DNA_Anterior nares
27
100
+
Glu
CTC
[ENA]
¢þ
>WENV181115891
OEES01002274
[OEES] human metagenome; G_DNA_Anterior nares
31
106
+
Thr
TGT
[ENA]
¢þ
>WENV181115894
OEES01004089
[OEES] human metagenome; G_DNA_Anterior nares
55
130
+
Thr
CGT
[ENA]
¢þ
>WENV181115903
OEES01008984
[OEES] human metagenome; G_DNA_Anterior nares
82
9
-
His
GTG
[ENA]
¢þ
>WENV181115902
OEES01008157
[OEES] human metagenome; G_DNA_Anterior nares
82
155
+
Met
CAT
[ENA]
¢þ
>WENV181115896
OEES01004447
[OEES] human metagenome; G_DNA_Anterior nares
89
163
+
Ile
GAT
[ENA]
¢þ
>WENV181115898
OEES01004937
[OEES] human metagenome; G_DNA_Anterior nares
93
19
-
Leu
CAA
[ENA]
¢þ
>WENV181115904
OEES01009847
[OEES] human metagenome; G_DNA_Anterior nares
93
20
-
Arg
ACG
[ENA]
¢þ
>WENV181115889
OEES01001670
[OEES] human metagenome; G_DNA_Anterior nares
101
183
+
Tyr
GTA
[ENA]
¢þ
>WENV181115869
OEES01000004
[OEES] human metagenome; G_DNA_Anterior nares
102
173
+
Gln
TTG
[ENA]
¢þ
>WENV181115901
OEES01007851
[OEES] human metagenome; G_DNA_Anterior nares
104
30
-
Arg
CCG
[ENA]
¢þ
>WENV181115905
OEES01010322
[OEES] human metagenome; G_DNA_Anterior nares
104
195
+
Glu
CTC
[ENA]
¢þ
>WENV181115899
OEES01005086
[OEES] human metagenome; G_DNA_Anterior nares
116
26
-
Thr
TGT
[ENA]
¢þ
>WENV181115907
OEES01010659
[OEES] human metagenome; G_DNA_Anterior nares
117
190
+
Lys
TTT
[ENA]
¢þ
>WENV181115906
OEES01010441
[OEES] human metagenome; G_DNA_Anterior nares
122
197
+
Gly
GCC
[ENA]
¢þ
>WENV181115890
OEES01002211
[OEES] human metagenome; G_DNA_Anterior nares
131
58
-
Gly
CCC
[ENA]
¢þ
>WENV181115887
OEES01001130
[OEES] human metagenome; G_DNA_Anterior nares
135
62
-
Lys
CTT
[ENA]
¢þ
>WENV181115893
OEES01003013
[OEES] human metagenome; G_DNA_Anterior nares
149
239
+
Ser
GGA
[ENA]
¢þ
>WENV181115908
OEES01011138
[OEES] human metagenome; G_DNA_Anterior nares
156
68
-
Ser
GCT
[ENA]
¢þ
>WENV181115867
OEES01000003
[OEES] human metagenome; G_DNA_Anterior nares
172
247
+
Arg
TCG
[ENA]
¢þ
>WENV181115884
OEES01000659
[OEES] human metagenome; G_DNA_Anterior nares
181
108
-
Asn
GTT
[ENA]
¢þ
>WENV181115892
OEES01002548
[OEES] human metagenome; G_DNA_Anterior nares
186
114
-
Gln
CTG
[ENA]
¢þ
>WENV181115877
OEES01000042
[OEES] human metagenome; G_DNA_Anterior nares
235
160
-
Trp
CCA
[ENA]
¢þ
>WENV181115900
OEES01007085
[OEES] human metagenome; G_DNA_Anterior nares
247
174
-
Ala
TGC
[ENA]
¢þ
>WENV181115888
OEES01001651
[OEES] human metagenome; G_DNA_Anterior nares
257
348
+
Pro
AGG
[ENA]
¢þ
>WENV181115897
OEES01004821
[OEES] human metagenome; G_DNA_Anterior nares
258
170
-
Ser
TGA
[ENA]
¢þ
>WENV181115886
OEES01000803
[OEES] human metagenome; G_DNA_Anterior nares
286
370
+
Leu
TAG
[ENA]
¢þ
>WENV181115885
OEES01000735
[OEES] human metagenome; G_DNA_Anterior nares
353
423
+
Val
TAC
[ENA]
¢þ
>WENV181115882
OEES01000411
[OEES] human metagenome; G_DNA_Anterior nares
364
290
-
Pro
GGG
[ENA]
¢þ
>WENV181115879
OEES01000048
[OEES] human metagenome; G_DNA_Anterior nares
380
307
-
Arg
CCT
[ENA]
¢þ
>WENV181115878
OEES01000045
[OEES] human metagenome; G_DNA_Anterior nares
603
533
-
Met
CAT
[ENA]
¢þ
>WENV181115873
OEES01000004
[OEES] human metagenome; G_DNA_Anterior nares
621
546
-
Lys
TTT
[ENA]
¢þ
>WENV181115883
OEES01000583
[OEES] human metagenome; G_DNA_Anterior nares
635
561
-
Ile2
CAT
[ENA]
¢þ
>WENV181115876
OEES01000042
[OEES] human metagenome; G_DNA_Anterior nares
782
708
-
Met
CAT
[ENA]
¢þ
>WENV181115881
OEES01000066
[OEES] human metagenome; G_DNA_Anterior nares
846
773
-
Ala
TGC
[ENA]
¢þ
>WENV181115880
OEES01000066
[OEES] human metagenome; G_DNA_Anterior nares
949
873
-
Ile
GAT
[ENA]
¢þ
>WENV181115875
OEES01000042
[OEES] human metagenome; G_DNA_Anterior nares
961
888
-
Thr
GGT
[ENA]
¢þ
>WENV181115874
OEES01000042
[OEES] human metagenome; G_DNA_Anterior nares
1279
1197
-
Tyr
GTA
[ENA]
¢þ
>WENV181115866
OEES01000001
[OEES] human metagenome; G_DNA_Anterior nares
2629
2555
-
Asn
GTT
[ENA]
¢þ
>WENV181115870
OEES01000004
[OEES] human metagenome; G_DNA_Anterior nares
2977
3051
+
Ala
TGC
[ENA]
¢þ
>WENV181115871
OEES01000004
[OEES] human metagenome; G_DNA_Anterior nares
3143
3225
+
Tyr
GTA
[ENA]
¢þ
>WENV181115872
OEES01000004
[OEES] human metagenome; G_DNA_Anterior nares
3263
3347
+
Ser
TGA
[ENA]
¢þ
>WENV181115868
OEES01000003
[OEES] human metagenome; G_DNA_Anterior nares
3504
3431
-
Asp
GTC
[ENA]
¢þ
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
View ClustalW result
BACK