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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
Top
|
Keyword
|
BLAST
|
Download
|
HOW TO USE
tRNA gene List
[OEGB] human metagenome; G_DNA_Posterior fornix
HIT:
78 sequence(s).
Download Sequence
View ClustalW result
The reliable tRNA genes
All candidate tRNA genes
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
>WENV181131363
OEGB01000224
[OEGB] human metagenome; G_DNA_Posterior fornix
2
76
+
Val
TAC
[ENA]
¢þ
>WENV181131335
OEGB01000029
[OEGB] human metagenome; G_DNA_Posterior fornix
59
151
+
Ser
GGA
[ENA]
¢þ
>WENV181131312
OEGB01000009
[OEGB] human metagenome; G_DNA_Posterior fornix
63
146
+
Tyr
GTA
[ENA]
¢þ
>WENV181131357
OEGB01000043
[OEGB] human metagenome; G_DNA_Posterior fornix
73
148
+
Arg
ACG
[ENA]
¢þ
>WENV181131364
OEGB01000224
[OEGB] human metagenome; G_DNA_Posterior fornix
81
155
+
Lys
TTT
[ENA]
¢þ
>WENV181131369
OEGB01001918
[OEGB] human metagenome; G_DNA_Posterior fornix
97
6
-
Ser
GCT
[ENA]
¢þ
>WENV181131338
OEGB01000033
[OEGB] human metagenome; G_DNA_Posterior fornix
120
211
+
Ser
GGA
[ENA]
¢þ
>WENV181131313
OEGB01000009
[OEGB] human metagenome; G_DNA_Posterior fornix
149
221
+
Trp
CCA
[ENA]
¢þ
>WENV181131362
OEGB01000178
[OEGB] human metagenome; G_DNA_Posterior fornix
156
86
-
Cys
GCA
[ENA]
¢þ
>WENV181131365
OEGB01000224
[OEGB] human metagenome; G_DNA_Posterior fornix
169
250
+
Leu
TAG
[ENA]
¢þ
>WENV181131314
OEGB01000009
[OEGB] human metagenome; G_DNA_Posterior fornix
234
307
+
His
GTG
[ENA]
¢þ
>WENV181131336
OEGB01000029
[OEGB] human metagenome; G_DNA_Posterior fornix
236
309
+
Glu
TTC
[ENA]
¢þ
>WENV181131361
OEGB01000178
[OEGB] human metagenome; G_DNA_Posterior fornix
252
179
-
Gln
TTG
[ENA]
¢þ
>WENV181131368
OEGB01000791
[OEGB] human metagenome; G_DNA_Posterior fornix
257
183
-
Ala
TGC
[ENA]
¢þ
>WENV181131366
OEGB01000224
[OEGB] human metagenome; G_DNA_Posterior fornix
280
354
+
Thr
TGT
[ENA]
¢þ
>WENV181131339
OEGB01000033
[OEGB] human metagenome; G_DNA_Posterior fornix
309
382
+
Glu
TTC
[ENA]
¢þ
>WENV181131337
OEGB01000029
[OEGB] human metagenome; G_DNA_Posterior fornix
313
387
+
Val
TAC
[ENA]
¢þ
>WENV181131360
OEGB01000178
[OEGB] human metagenome; G_DNA_Posterior fornix
331
258
-
His
GTG
[ENA]
¢þ
>WENV181131315
OEGB01000009
[OEGB] human metagenome; G_DNA_Posterior fornix
359
429
+
Cys
GCA
[ENA]
¢þ
>WENV181131367
OEGB01000224
[OEGB] human metagenome; G_DNA_Posterior fornix
365
436
+
Gly
GCC
[ENA]
¢þ
>WENV181131340
OEGB01000033
[OEGB] human metagenome; G_DNA_Posterior fornix
385
459
+
Val
TAC
[ENA]
¢þ
>WENV181131359
OEGB01000178
[OEGB] human metagenome; G_DNA_Posterior fornix
417
345
-
Trp
CCA
[ENA]
¢þ
>WENV181131316
OEGB01000009
[OEGB] human metagenome; G_DNA_Posterior fornix
456
541
+
Leu
CAA
[ENA]
¢þ
>WENV181131342
OEGB01000039
[OEGB] human metagenome; G_DNA_Posterior fornix
3193
3110
-
Leu
CAG
[ENA]
¢þ
>WENV181131356
OEGB01000041
[OEGB] human metagenome; G_DNA_Posterior fornix
4314
4223
-
Ser
GCT
[ENA]
¢þ
>WENV181131355
OEGB01000041
[OEGB] human metagenome; G_DNA_Posterior fornix
4391
4316
-
Ile
GAT
[ENA]
¢þ
>WENV181131354
OEGB01000041
[OEGB] human metagenome; G_DNA_Posterior fornix
4554
4480
-
Phe
GAA
[ENA]
¢þ
>WENV181131353
OEGB01000041
[OEGB] human metagenome; G_DNA_Posterior fornix
4709
4634
-
fMet
CAT
[ENA]
¢þ
>WENV181131352
OEGB01000041
[OEGB] human metagenome; G_DNA_Posterior fornix
4819
4744
-
Ile2
CAT
[ENA]
¢þ
>WENV181131351
OEGB01000041
[OEGB] human metagenome; G_DNA_Posterior fornix
4906
4831
-
Met
CAT
[ENA]
¢þ
>WENV181131350
OEGB01000041
[OEGB] human metagenome; G_DNA_Posterior fornix
5006
4933
-
Pro
TGG
[ENA]
¢þ
>WENV181131358
OEGB01000043
[OEGB] human metagenome; G_DNA_Posterior fornix
5054
4981
-
Asn
GTT
[ENA]
¢þ
>WENV181131349
OEGB01000041
[OEGB] human metagenome; G_DNA_Posterior fornix
5086
5010
-
Arg
ACG
[ENA]
¢þ
>WENV181131348
OEGB01000041
[OEGB] human metagenome; G_DNA_Posterior fornix
5182
5095
-
Leu
TAA
[ENA]
¢þ
>WENV181131347
OEGB01000041
[OEGB] human metagenome; G_DNA_Posterior fornix
5265
5194
-
Gly
GCC
[ENA]
¢þ
>WENV181131346
OEGB01000041
[OEGB] human metagenome; G_DNA_Posterior fornix
5343
5270
-
Thr
TGT
[ENA]
¢þ
>WENV181131345
OEGB01000041
[OEGB] human metagenome; G_DNA_Posterior fornix
5458
5375
-
Leu
TAG
[ENA]
¢þ
>WENV181131344
OEGB01000041
[OEGB] human metagenome; G_DNA_Posterior fornix
5545
5473
-
Lys
TTT
[ENA]
¢þ
>WENV181131343
OEGB01000041
[OEGB] human metagenome; G_DNA_Posterior fornix
5621
5546
-
Val
TAC
[ENA]
¢þ
>WENV181131341
OEGB01000036
[OEGB] human metagenome; G_DNA_Posterior fornix
12076
12003
-
Asn
GTT
[ENA]
¢þ
>WENV181131332
OEGB01000026
[OEGB] human metagenome; G_DNA_Posterior fornix
19039
19112
+
Glu
CTC
[ENA]
¢þ
>WENV181131333
OEGB01000026
[OEGB] human metagenome; G_DNA_Posterior fornix
19116
19188
+
Gln
CTG
[ENA]
¢þ
>WENV181131299
OEGB01000004
[OEGB] human metagenome; G_DNA_Posterior fornix
20533
20606
+
Lys
CTT
[ENA]
¢þ
>WENV181131300
OEGB01000004
[OEGB] human metagenome; G_DNA_Posterior fornix
23530
23603
+
Lys
CTT
[ENA]
¢þ
>WENV181131330
OEGB01000023
[OEGB] human metagenome; G_DNA_Posterior fornix
25193
25106
-
Leu
AAG
[ENA]
¢þ
>WENV181131325
OEGB01000020
[OEGB] human metagenome; G_DNA_Posterior fornix
26767
26692
-
Pro
CGG
[ENA]
¢þ
>WENV181131324
OEGB01000020
[OEGB] human metagenome; G_DNA_Posterior fornix
26876
26805
-
Gly
GCC
[ENA]
¢þ
>WENV181131322
OEGB01000016
[OEGB] human metagenome; G_DNA_Posterior fornix
28090
28018
-
Thr
GGT
[ENA]
¢þ
>WENV181131295
OEGB01000002
[OEGB] human metagenome; G_DNA_Posterior fornix
33381
33309
-
Thr
AGT
[ENA]
¢þ
>WENV181131334
OEGB01000026
[OEGB] human metagenome; G_DNA_Posterior fornix
35031
34957
-
Thr
CGT
[ENA]
¢þ
>WENV181131298
OEGB01000003
[OEGB] human metagenome; G_DNA_Posterior fornix
35365
35279
-
Ser
CGA
[ENA]
¢þ
>WENV181131331
OEGB01000025
[OEGB] human metagenome; G_DNA_Posterior fornix
36047
36130
+
Leu
CAG
[ENA]
¢þ
>WENV181131329
OEGB01000023
[OEGB] human metagenome; G_DNA_Posterior fornix
38719
38646
-
Gln
TTG
[ENA]
¢þ
>WENV181131328
OEGB01000023
[OEGB] human metagenome; G_DNA_Posterior fornix
38806
38724
-
Tyr
GTA
[ENA]
¢þ
>WENV181131327
OEGB01000023
[OEGB] human metagenome; G_DNA_Posterior fornix
39928
39855
-
Gln
TTG
[ENA]
¢þ
>WENV181131326
OEGB01000023
[OEGB] human metagenome; G_DNA_Posterior fornix
42144
42216
+
Thr
CGT
[ENA]
¢þ
>WENV181131321
OEGB01000014
[OEGB] human metagenome; G_DNA_Posterior fornix
43210
43135
-
Arg
CCT
[ENA]
¢þ
>WENV181131297
OEGB01000003
[OEGB] human metagenome; G_DNA_Posterior fornix
48644
48571
-
Arg
TCT
[ENA]
¢þ
>WENV181131323
OEGB01000018
[OEGB] human metagenome; G_DNA_Posterior fornix
53741
53668
-
Asn
GTT
[ENA]
¢þ
>WENV181131320
OEGB01000013
[OEGB] human metagenome; G_DNA_Posterior fornix
54746
54673
-
Arg
CCG
[ENA]
¢þ
>WENV181131317
OEGB01000009
[OEGB] human metagenome; G_DNA_Posterior fornix
59178
59254
+
Arg
TCT
[ENA]
¢þ
>WENV181131301
OEGB01000004
[OEGB] human metagenome; G_DNA_Posterior fornix
61015
60941
-
Thr
AGT
[ENA]
¢þ
>WENV181131311
OEGB01000007
[OEGB] human metagenome; G_DNA_Posterior fornix
62829
62744
-
Leu
AAG
[ENA]
¢þ
>WENV181131294
OEGB01000002
[OEGB] human metagenome; G_DNA_Posterior fornix
69693
69619
-
Lys
CTT
[ENA]
¢þ
>WENV181131306
OEGB01000006
[OEGB] human metagenome; G_DNA_Posterior fornix
69960
69888
-
Gly
GCC
[ENA]
¢þ
>WENV181131305
OEGB01000006
[OEGB] human metagenome; G_DNA_Posterior fornix
70094
70019
-
Pro
CGG
[ENA]
¢þ
>WENV181131304
OEGB01000006
[OEGB] human metagenome; G_DNA_Posterior fornix
70210
70136
-
Gly
GCC
[ENA]
¢þ
>WENV181131310
OEGB01000007
[OEGB] human metagenome; G_DNA_Posterior fornix
77610
77537
-
Gln
TTG
[ENA]
¢þ
>WENV181131309
OEGB01000007
[OEGB] human metagenome; G_DNA_Posterior fornix
77699
77616
-
Tyr
GTA
[ENA]
¢þ
>WENV181131308
OEGB01000007
[OEGB] human metagenome; G_DNA_Posterior fornix
78903
78830
-
Gln
TTG
[ENA]
¢þ
>WENV181131319
OEGB01000009
[OEGB] human metagenome; G_DNA_Posterior fornix
91215
91143
-
Gln
CTG
[ENA]
¢þ
>WENV181131318
OEGB01000009
[OEGB] human metagenome; G_DNA_Posterior fornix
91293
91220
-
Glu
CTC
[ENA]
¢þ
>WENV181131307
OEGB01000007
[OEGB] human metagenome; G_DNA_Posterior fornix
102668
102739
+
Arg
CCG
[ENA]
¢þ
>WENV181131296
OEGB01000003
[OEGB] human metagenome; G_DNA_Posterior fornix
107976
108048
+
Arg
CCT
[ENA]
¢þ
>WENV181131302
OEGB01000006
[OEGB] human metagenome; G_DNA_Posterior fornix
138664
138734
+
Gly
CCC
[ENA]
¢þ
>WENV181131303
OEGB01000006
[OEGB] human metagenome; G_DNA_Posterior fornix
146024
145952
-
Thr
GGT
[ENA]
¢þ
>WENV181131293
OEGB01000002
[OEGB] human metagenome; G_DNA_Posterior fornix
158199
158127
-
Gly
CCC
[ENA]
¢þ
>WENV181131292
OEGB01000001
[OEGB] human metagenome; G_DNA_Posterior fornix
263084
262998
-
Ser
CGA
[ENA]
¢þ
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
View ClustalW result
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