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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
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HOW TO USE
tRNA gene List
[OEJG] human gut metagenome; human gut
HIT:
17 sequence(s).
Download Sequence
View ClustalW result
The reliable tRNA genes
All candidate tRNA genes
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
>WENV181173501
OEJG01000863
[OEJG] human gut metagenome; human gut
80
8
-
Gln
CTG
[ENA]
¢þ
>WENV181173503
OEJG01001253
[OEJG] human gut metagenome; human gut
113
189
+
Leu
CAA
[ENA]
¢þ
>WENV181173508
OEJG01003046
[OEJG] human gut metagenome; human gut
125
38
-
Ser
GCT
[ENA]
¢þ
>WENV181173507
OEJG01002294
[OEJG] human gut metagenome; human gut
129
54
-
Trp
CCA
[ENA]
¢þ
>WENV181173502
OEJG01000892
[OEJG] human gut metagenome; human gut
141
67
-
Ile
GAT
[ENA]
¢þ
>WENV181173505
OEJG01002194
[OEJG] human gut metagenome; human gut
148
65
-
Leu
CAG
[ENA]
¢þ
>WENV181173504
OEJG01001730
[OEJG] human gut metagenome; human gut
153
241
+
Ser
GGA
[ENA]
¢þ
>WENV181173509
OEJG01003291
[OEJG] human gut metagenome; human gut
166
81
-
Ser
TGA
[ENA]
¢þ
>WENV181173500
OEJG01000863
[OEJG] human gut metagenome; human gut
192
119
-
Glu
CTC
[ENA]
¢þ
>WENV181173506
OEJG01002231
[OEJG] human gut metagenome; human gut
239
164
-
His
GTG
[ENA]
¢þ
>WENV181173493
OEJG01000072
[OEJG] human gut metagenome; human gut
559
632
+
Gly
GCC
[ENA]
¢þ
>WENV181173494
OEJG01000072
[OEJG] human gut metagenome; human gut
678
750
+
Val
GAC
[ENA]
¢þ
>WENV181173497
OEJG01000102
[OEJG] human gut metagenome; human gut
679
597
-
Leu
TAG
[ENA]
¢þ
>WENV181173499
OEJG01000132
[OEJG] human gut metagenome; human gut
681
754
+
Arg
CCT
[ENA]
¢þ
>WENV181173498
OEJG01000110
[OEJG] human gut metagenome; human gut
742
815
+
Thr
CGT
[ENA]
¢þ
>WENV181173495
OEJG01000072
[OEJG] human gut metagenome; human gut
798
871
+
Val
CAC
[ENA]
¢þ
>WENV181173496
OEJG01000102
[OEJG] human gut metagenome; human gut
839
766
-
Thr
CGT
[ENA]
¢þ
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
View ClustalW result
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