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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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|
Keyword
|
BLAST
|
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HOW TO USE
tRNA gene List
[OEJN] human gut metagenome; human gut
HIT:
45 sequence(s).
Download Sequence
View ClustalW result
The reliable tRNA genes
All candidate tRNA genes
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
>WENV181173783
OEJN01026953
[OEJN] human gut metagenome; human gut
7
83
+
Ile
GAT
[ENA]
¢þ
>WENV181173771
OEJN01016249
[OEJN] human gut metagenome; human gut
33
107
+
Thr
TGT
[ENA]
¢þ
>WENV181173752
OEJN01003846
[OEJN] human gut metagenome; human gut
33
116
+
Leu
CAG
[ENA]
¢þ
>WENV181173776
OEJN01018727
[OEJN] human gut metagenome; human gut
43
118
+
Lys
TTT
[ENA]
¢þ
>WENV181173770
OEJN01014677
[OEJN] human gut metagenome; human gut
71
145
+
Asn
GTT
[ENA]
¢þ
>WENV181173753
OEJN01003999
[OEJN] human gut metagenome; human gut
76
152
+
Ile2
CAT
[ENA]
¢þ
>WENV181173774
OEJN01017273
[OEJN] human gut metagenome; human gut
82
157
+
Arg
TCT
[ENA]
¢þ
>WENV181173766
OEJN01012530
[OEJN] human gut metagenome; human gut
106
31
-
Asn
GTT
[ENA]
¢þ
>WENV181173760
OEJN01010077
[OEJN] human gut metagenome; human gut
117
41
-
Arg
CCG
[ENA]
¢þ
>WENV181173778
OEJN01023410
[OEJN] human gut metagenome; human gut
118
45
-
Gly
CCC
[ENA]
¢þ
>WENV181173758
OEJN01009757
[OEJN] human gut metagenome; human gut
119
44
-
Arg
CCT
[ENA]
¢þ
>WENV181173784
OEJN01027240
[OEJN] human gut metagenome; human gut
119
193
+
Gln
CTG
[ENA]
¢þ
>WENV181173772
OEJN01016249
[OEJN] human gut metagenome; human gut
122
204
+
Tyr
GTA
[ENA]
¢þ
>WENV181173775
OEJN01017287
[OEJN] human gut metagenome; human gut
122
204
+
Tyr
GTA
[ENA]
¢þ
>WENV181173781
OEJN01025248
[OEJN] human gut metagenome; human gut
126
52
-
Arg
ACG
[ENA]
¢þ
>WENV181173762
OEJN01010560
[OEJN] human gut metagenome; human gut
132
46
-
Leu
CAA
[ENA]
¢þ
>WENV181173769
OEJN01013358
[OEJN] human gut metagenome; human gut
133
59
-
Gly
CCC
[ENA]
¢þ
>WENV181173767
OEJN01012727
[OEJN] human gut metagenome; human gut
136
216
+
Leu
TAG
[ENA]
¢þ
>WENV181173777
OEJN01019434
[OEJN] human gut metagenome; human gut
144
71
-
Thr
CGT
[ENA]
¢þ
>WENV181173756
OEJN01007980
[OEJN] human gut metagenome; human gut
146
73
-
Ala
TGC
[ENA]
¢þ
>WENV181173780
OEJN01023759
[OEJN] human gut metagenome; human gut
150
77
-
Lys
CTT
[ENA]
¢þ
>WENV181173782
OEJN01026656
[OEJN] human gut metagenome; human gut
155
81
-
Glu
CTC
[ENA]
¢þ
>WENV181173779
OEJN01023561
[OEJN] human gut metagenome; human gut
156
82
-
Pro
TGG
[ENA]
¢þ
>WENV181173768
OEJN01013307
[OEJN] human gut metagenome; human gut
156
85
-
Asn
GTT
[ENA]
¢þ
>WENV181173759
OEJN01009959
[OEJN] human gut metagenome; human gut
159
235
+
Ala
TGC
[ENA]
¢þ
>WENV181173754
OEJN01003999
[OEJN] human gut metagenome; human gut
166
241
+
Trp
CCA
[ENA]
¢þ
>WENV181173755
OEJN01004392
[OEJN] human gut metagenome; human gut
167
95
-
Ala
TGC
[ENA]
¢þ
>WENV181173761
OEJN01010236
[OEJN] human gut metagenome; human gut
189
115
-
Met
CAT
[ENA]
¢þ
>WENV181173765
OEJN01012530
[OEJN] human gut metagenome; human gut
200
124
-
Asp
GTC
[ENA]
¢þ
>WENV181173750
OEJN01001991
[OEJN] human gut metagenome; human gut
217
143
-
His
GTG
[ENA]
¢þ
>WENV181173764
OEJN01012435
[OEJN] human gut metagenome; human gut
221
146
-
Thr
GGT
[ENA]
¢þ
>WENV181173773
OEJN01016943
[OEJN] human gut metagenome; human gut
224
151
-
Gly
GCC
[ENA]
¢þ
>WENV181173757
OEJN01008697
[OEJN] human gut metagenome; human gut
249
165
-
Leu
GAG
[ENA]
¢þ
>WENV181173763
OEJN01010851
[OEJN] human gut metagenome; human gut
253
181
-
Glu
CTC
[ENA]
¢þ
>WENV181173749
OEJN01001991
[OEJN] human gut metagenome; human gut
339
264
-
Arg
TCT
[ENA]
¢þ
>WENV181173751
OEJN01003235
[OEJN] human gut metagenome; human gut
406
320
-
Leu
AAG
[ENA]
¢þ
>WENV181173748
OEJN01001991
[OEJN] human gut metagenome; human gut
440
370
-
Gly
TCC
[ENA]
¢þ
>WENV181173747
OEJN01001991
[OEJN] human gut metagenome; human gut
521
446
-
Pro
TGG
[ENA]
¢þ
>WENV181173746
OEJN01000559
[OEJN] human gut metagenome; human gut
573
490
-
Tyr
GTA
[ENA]
¢þ
>WENV181173741
OEJN01000169
[OEJN] human gut metagenome; human gut
627
702
+
Ala
TGC
[ENA]
¢þ
>WENV181173745
OEJN01000559
[OEJN] human gut metagenome; human gut
674
602
-
Thr
TGT
[ENA]
¢þ
>WENV181173742
OEJN01000169
[OEJN] human gut metagenome; human gut
736
812
+
Ile
GAT
[ENA]
¢þ
>WENV181173744
OEJN01000559
[OEJN] human gut metagenome; human gut
773
699
-
Val
TAC
[ENA]
¢þ
>WENV181173743
OEJN01000559
[OEJN] human gut metagenome; human gut
927
852
-
Asp
GTC
[ENA]
¢þ
>WENV181173740
OEJN01000083
[OEJN] human gut metagenome; human gut
1685
1760
+
Asn
GTT
[ENA]
¢þ
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
View ClustalW result
BACK