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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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HOW TO USE
tRNA gene List
[OELD] metagenome; 1998
HIT:
23 sequence(s).
Download Sequence
View ClustalW result
The reliable tRNA genes
All candidate tRNA genes
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
>WENV181185149
OELD01001023
[OELD] metagenome; 1998
26
100
+
Pro
TGG
[ENA]
¢þ
>WENV181185141
OELD01000503
[OELD] metagenome; 1998
29
102
+
Arg
CCG
[ENA]
¢þ
>WENV181185131
OELD01000220
[OELD] metagenome; 1998
95
167
+
Thr
CGT
[ENA]
¢þ
>WENV181185127
OELD01000022
[OELD] metagenome; 1998
279
206
-
Thr
TGT
[ENA]
¢þ
>WENV181185148
OELD01000958
[OELD] metagenome; 1998
352
434
+
Ser
TGA
[ENA]
¢þ
>WENV181185147
OELD01000939
[OELD] metagenome; 1998
572
490
-
Leu
TAG
[ENA]
¢þ
>WENV181185140
OELD01000467
[OELD] metagenome; 1998
745
671
-
Arg
TCT
[ENA]
¢þ
>WENV181185145
OELD01000703
[OELD] metagenome; 1998
753
827
+
Asn
GTT
[ENA]
¢þ
>WENV181185134
OELD01000394
[OELD] metagenome; 1998
931
1003
+
Cys
GCA
[ENA]
¢þ
>WENV181185133
OELD01000378
[OELD] metagenome; 1998
997
923
-
Lys
CTT
[ENA]
¢þ
>WENV181185137
OELD01000443
[OELD] metagenome; 1998
1614
1529
-
Leu
TAA
[ENA]
¢þ
>WENV181185135
OELD01000397
[OELD] metagenome; 1998
1874
1802
-
Ile2
CAT
[ENA]
¢þ
>WENV181185144
OELD01000688
[OELD] metagenome; 1998
2019
2105
+
Ser
GGA
[ENA]
¢þ
>WENV181185128
OELD01000040
[OELD] metagenome; 1998
2351
2281
-
Gln
TTG
[ENA]
¢þ
>WENV181185129
OELD01000096
[OELD] metagenome; 1998
2388
2480
+
Ser
GCT
[ENA]
¢þ
>WENV181185139
OELD01000463
[OELD] metagenome; 1998
2513
2425
-
Ser
CGA
[ENA]
¢þ
>WENV181185142
OELD01000579
[OELD] metagenome; 1998
2677
2752
+
His
GTG
[ENA]
¢þ
>WENV181185143
OELD01000579
[OELD] metagenome; 1998
2862
2935
+
Trp
CCA
[ENA]
¢þ
>WENV181185138
OELD01000456
[OELD] metagenome; 1998
3401
3475
+
Arg
CCT
[ENA]
¢þ
>WENV181185132
OELD01000280
[OELD] metagenome; 1998
3449
3542
+
SeC
TCA
[ENA]
¢þ
>WENV181185146
OELD01000796
[OELD] metagenome; 1998
4935
5007
+
Glu
CTC
[ENA]
¢þ
>WENV181185130
OELD01000141
[OELD] metagenome; 1998
6187
6103
-
Leu
CAG
[ENA]
¢þ
>WENV181185136
OELD01000402
[OELD] metagenome; 1998
14773
14856
+
Leu
CAA
[ENA]
¢þ
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
View ClustalW result
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