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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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HOW TO USE
tRNA gene List
[OELH] metagenome; 1998
HIT:
23 sequence(s).
Download Sequence
View ClustalW result
The reliable tRNA genes
All candidate tRNA genes
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
>WENV181185282
OELH01000101
[OELH] metagenome; 1998
2
75
+
Thr
TGT
[ENA]
¢þ
>WENV181185283
OELH01000108
[OELH] metagenome; 1998
75
2
-
Gly
CCC
[ENA]
¢þ
>WENV181185289
OELH01000346
[OELH] metagenome; 1998
79
6
-
Arg
CCG
[ENA]
¢þ
>WENV181185294
OELH01000419
[OELH] metagenome; 1998
90
17
-
Thr
GGT
[ENA]
¢þ
>WENV181185288
OELH01000270
[OELH] metagenome; 1998
92
5
-
Ser
TGA
[ENA]
¢þ
>WENV181185287
OELH01000221
[OELH] metagenome; 1998
119
190
+
Gln
TTG
[ENA]
¢þ
>WENV181185299
OELH01000726
[OELH] metagenome; 1998
166
74
-
SeC
TCA
[ENA]
¢þ
>WENV181185285
OELH01000113
[OELH] metagenome; 1998
445
358
-
Ser
GGA
[ENA]
¢þ
>WENV181185295
OELH01000434
[OELH] metagenome; 1998
547
474
-
Arg
CCT
[ENA]
¢þ
>WENV181185284
OELH01000113
[OELH] metagenome; 1998
602
512
-
Ser
CGA
[ENA]
¢þ
>WENV181185291
OELH01000376
[OELH] metagenome; 1998
643
559
-
Tyr
GTA
[ENA]
¢þ
>WENV181185296
OELH01000516
[OELH] metagenome; 1998
712
786
+
Trp
CCA
[ENA]
¢þ
>WENV181185297
OELH01000572
[OELH] metagenome; 1998
1003
1077
+
His
GTG
[ENA]
¢þ
>WENV181185298
OELH01000572
[OELH] metagenome; 1998
1110
1184
+
Lys
CTT
[ENA]
¢þ
>WENV181185301
OELH01000955
[OELH] metagenome; 1998
1280
1206
-
Ala
CGC
[ENA]
¢þ
>WENV181185300
OELH01000733
[OELH] metagenome; 1998
1602
1678
+
fMet
CAT
[ENA]
¢þ
>WENV181185286
OELH01000129
[OELH] metagenome; 1998
1781
1867
+
Leu
TAA
[ENA]
¢þ
>WENV181185292
OELH01000383
[OELH] metagenome; 1998
1842
1913
+
Gln
CTG
[ENA]
¢þ
>WENV181185290
OELH01000356
[OELH] metagenome; 1998
1963
2039
+
Pro
CGG
[ENA]
¢þ
>WENV181185293
OELH01000402
[OELH] metagenome; 1998
3064
3152
+
Leu
GAG
[ENA]
¢þ
>WENV181185304
OELH01000990
[OELH] metagenome; 1998
3978
3905
-
Phe
GAA
[ENA]
¢þ
>WENV181185303
OELH01000990
[OELH] metagenome; 1998
4196
4123
-
Glu
TTC
[ENA]
¢þ
>WENV181185302
OELH01000990
[OELH] metagenome; 1998
4730
4654
-
Lys
TTT
[ENA]
¢þ
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
View ClustalW result
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