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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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HOW TO USE
tRNA gene List
[OELS] metagenome; 1998
HIT:
23 sequence(s).
Download Sequence
View ClustalW result
The reliable tRNA genes
All candidate tRNA genes
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
>WENV181185557
OELS01000181
[OELS] metagenome; 1998
126
36
-
Ser
CGA
[ENA]
¢þ
>WENV181185571
OELS01001391
[OELS] metagenome; 1998
193
268
+
Thr
TGT
[ENA]
¢þ
>WENV181185558
OELS01000222
[OELS] metagenome; 1998
214
288
+
Val
CAC
[ENA]
¢þ
>WENV181185566
OELS01000724
[OELS] metagenome; 1998
243
167
-
Pro
TGG
[ENA]
¢þ
>WENV181185567
OELS01000804
[OELS] metagenome; 1998
471
387
-
Leu
TAG
[ENA]
¢þ
>WENV181185572
OELS01001578
[OELS] metagenome; 1998
541
616
+
Glu
CTC
[ENA]
¢þ
>WENV181185563
OELS01000519
[OELS] metagenome; 1998
635
559
-
Pro
GGG
[ENA]
¢þ
>WENV181185575
OELS01002242
[OELS] metagenome; 1998
699
608
-
Ile
TAT
[ENA]
¢þ
>WENV181185574
OELS01002143
[OELS] metagenome; 1998
760
846
+
Leu
CAG
[ENA]
¢þ
>WENV181185561
OELS01000379
[OELS] metagenome; 1998
1084
1159
+
Ala
CGC
[ENA]
¢þ
>WENV181185573
OELS01001679
[OELS] metagenome; 1998
1800
1876
+
Pro
CGG
[ENA]
¢þ
>WENV181185570
OELS01001375
[OELS] metagenome; 1998
2125
2049
-
Met
CAT
[ENA]
¢þ
>WENV181185556
OELS01000141
[OELS] metagenome; 1998
2265
2192
-
Cys
GCA
[ENA]
¢þ
>WENV181185578
OELS01002815
[OELS] metagenome; 1998
2366
2443
+
His
GTG
[ENA]
¢þ
>WENV181185564
OELS01000557
[OELS] metagenome; 1998
2421
2346
-
Arg
CCT
[ENA]
¢þ
>WENV181185576
OELS01002489
[OELS] metagenome; 1998
2558
2632
+
Gln
TTG
[ENA]
¢þ
>WENV181185565
OELS01000687
[OELS] metagenome; 1998
2803
2877
+
Val
GAC
[ENA]
¢þ
>WENV181185559
OELS01000277
[OELS] metagenome; 1998
3153
3229
+
Ile2
CAT
[ENA]
¢þ
>WENV181185562
OELS01000475
[OELS] metagenome; 1998
3435
3509
+
Gly
GCC
[ENA]
¢þ
>WENV181185577
OELS01002802
[OELS] metagenome; 1998
3803
3876
+
Gln
CTG
[ENA]
¢þ
>WENV181185568
OELS01001020
[OELS] metagenome; 1998
4512
4438
-
Asn
GTT
[ENA]
¢þ
>WENV181185560
OELS01000313
[OELS] metagenome; 1998
5280
5366
+
Leu
CAA
[ENA]
¢þ
>WENV181185569
OELS01001165
[OELS] metagenome; 1998
9871
9945
+
Gly
CCC
[ENA]
¢þ
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
View ClustalW result
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