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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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HOW TO USE
tRNA gene List
[OELX] metagenome; 1998
HIT:
24 sequence(s).
Download Sequence
View ClustalW result
The reliable tRNA genes
All candidate tRNA genes
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
>WENV181185737
OELX01001206
[OELX] metagenome; 1998
77
1
-
Arg
CCG
[ENA]
¢þ
>WENV181185725
OELX01000248
[OELX] metagenome; 1998
77
3
-
Thr
GGT
[ENA]
¢þ
>WENV181185715
OELX01000066
[OELX] metagenome; 1998
101
175
+
Gln
TTG
[ENA]
¢þ
>WENV181185728
OELX01000634
[OELX] metagenome; 1998
277
201
-
Met
CAT
[ENA]
¢þ
>WENV181185735
OELX01001063
[OELX] metagenome; 1998
355
280
-
Asn
GTT
[ENA]
¢þ
>WENV181185733
OELX01001040
[OELX] metagenome; 1998
448
523
+
Ile2
CAT
[ENA]
¢þ
>WENV181185721
OELX01000191
[OELX] metagenome; 1998
501
575
+
Lys
TTT
[ENA]
¢þ
>WENV181185726
OELX01000394
[OELX] metagenome; 1998
514
430
-
Leu
CAG
[ENA]
¢þ
>WENV181185724
OELX01000222
[OELX] metagenome; 1998
543
617
+
Gly
GCC
[ENA]
¢þ
>WENV181185718
OELX01000125
[OELX] metagenome; 1998
552
463
-
Ser
TGA
[ENA]
¢þ
>WENV181185719
OELX01000128
[OELX] metagenome; 1998
700
784
+
Leu
GAG
[ENA]
¢þ
>WENV181185738
OELX01001294
[OELX] metagenome; 1998
805
729
-
Asp
GTC
[ENA]
¢þ
>WENV181185734
OELX01001063
[OELX] metagenome; 1998
844
771
-
Cys
GCA
[ENA]
¢þ
>WENV181185717
OELX01000083
[OELX] metagenome; 1998
1109
1032
-
Arg
TCT
[ENA]
¢þ
>WENV181185722
OELX01000208
[OELX] metagenome; 1998
1297
1373
+
fMet
CAT
[ENA]
¢þ
>WENV181185731
OELX01000888
[OELX] metagenome; 1998
1308
1233
-
Ala
CGC
[ENA]
¢þ
>WENV181185727
OELX01000446
[OELX] metagenome; 1998
1353
1263
-
Ser
GGA
[ENA]
¢þ
>WENV181185723
OELX01000210
[OELX] metagenome; 1998
1393
1318
-
Val
TAC
[ENA]
¢þ
>WENV181185716
OELX01000083
[OELX] metagenome; 1998
1544
1468
-
Pro
TGG
[ENA]
¢þ
>WENV181185736
OELX01001094
[OELX] metagenome; 1998
1595
1670
+
Thr
CGT
[ENA]
¢þ
>WENV181185732
OELX01000900
[OELX] metagenome; 1998
1643
1567
-
Pro
GGG
[ENA]
¢þ
>WENV181185729
OELX01000834
[OELX] metagenome; 1998
2645
2571
-
Glu
CTC
[ENA]
¢þ
>WENV181185730
OELX01000847
[OELX] metagenome; 1998
3577
3503
-
Glu
TTC
[ENA]
¢þ
>WENV181185720
OELX01000170
[OELX] metagenome; 1998
4887
4963
+
His
GTG
[ENA]
¢þ
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
View ClustalW result
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