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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA gene List
[OEOX] activated sludge metagenome; activated sludge
HIT:
5 sequence(s).
Download Sequence
View ClustalW result
The reliable tRNA genes
All candidate tRNA genes
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
>WENV181190367
OEOX01000056
[OEOX] activated sludge metagenome; activated sludge
123
39
-
Leu
GAG
[ENA]
¢þ
>WENV181190368
OEOX01001618
[OEOX] activated sludge metagenome; activated sludge
208
135
-
Gly
CCC
[ENA]
¢þ
>WENV181190365
OEOX01000011
[OEOX] activated sludge metagenome; activated sludge
3371
3446
+
Asn
GTT
[ENA]
¢þ
>WENV181190366
OEOX01000014
[OEOX] activated sludge metagenome; activated sludge
3633
3558
-
Glu
TTC
[ENA]
¢þ
>WENV181190364
OEOX01000005
[OEOX] activated sludge metagenome; activated sludge
10911
10985
+
Pro
GGG
[ENA]
¢þ
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
View ClustalW result
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