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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
|
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HOW TO USE
tRNA gene List
[OFEI] insect metagenome; insect
HIT:
121 sequence(s).
Download Sequence
View ClustalW result
The reliable tRNA genes
All candidate tRNA genes
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
>WENV181228848
OFEI01000006
[OFEI] insect metagenome; insect
50
126
+
Asp
GTC
[ENA]
¢þ
>WENV181228935
OFEI01009163
[OFEI] insect metagenome; insect
93
10
-
Leu
TAA
[ENA]
¢þ
>WENV181228938
OFEI01010836
[OFEI] insect metagenome; insect
121
36
-
Ser
GGA
[ENA]
¢þ
>WENV181228940
OFEI01011582
[OFEI] insect metagenome; insect
125
200
+
Phe
GAA
[ENA]
¢þ
>WENV181228870
OFEI01000026
[OFEI] insect metagenome; insect
134
209
+
Thr
GGT
[ENA]
¢þ
>WENV181228849
OFEI01000006
[OFEI] insect metagenome; insect
134
209
+
Trp
CCA
[ENA]
¢þ
>WENV181228929
OFEI01006146
[OFEI] insect metagenome; insect
141
217
+
Ile
GAT
[ENA]
¢þ
>WENV181228943
OFEI01014542
[OFEI] insect metagenome; insect
164
235
+
Thr
TGT
[ENA]
¢þ
>WENV181228942
OFEI01012831
[OFEI] insect metagenome; insect
167
248
+
Leu
AAG
[ENA]
¢þ
>WENV181228937
OFEI01010295
[OFEI] insect metagenome; insect
175
89
-
Leu
CAG
[ENA]
¢þ
>WENV181228933
OFEI01007827
[OFEI] insect metagenome; insect
175
90
-
Leu
CAG
[ENA]
¢þ
>WENV181228936
OFEI01009648
[OFEI] insect metagenome; insect
176
102
-
Thr
AGT
[ENA]
¢þ
>WENV181228924
OFEI01004414
[OFEI] insect metagenome; insect
195
265
+
Gly
GCC
[ENA]
¢þ
>WENV181228941
OFEI01011832
[OFEI] insect metagenome; insect
199
110
-
Ser
GGA
[ENA]
¢þ
>WENV181228944
OFEI01014600
[OFEI] insect metagenome; insect
213
288
+
Arg
ACG
[ENA]
¢þ
>WENV181228855
OFEI01000007
[OFEI] insect metagenome; insect
214
290
+
Asp
GTC
[ENA]
¢þ
>WENV181228920
OFEI01002099
[OFEI] insect metagenome; insect
235
308
+
Lys
CTT
[ENA]
¢þ
>WENV181228919
OFEI01001949
[OFEI] insect metagenome; insect
274
345
+
Asp
GTC
[ENA]
¢þ
>WENV181228931
OFEI01007102
[OFEI] insect metagenome; insect
287
357
+
Gly
GCC
[ENA]
¢þ
>WENV181228922
OFEI01002829
[OFEI] insect metagenome; insect
312
386
+
Lys
TTT
[ENA]
¢þ
>WENV181228932
OFEI01007827
[OFEI] insect metagenome; insect
329
405
+
Arg
CCT
[ENA]
¢þ
>WENV181228939
OFEI01011156
[OFEI] insect metagenome; insect
350
423
+
Arg
TCG
[ENA]
¢þ
>WENV181228928
OFEI01006115
[OFEI] insect metagenome; insect
362
434
+
Arg
TCT
[ENA]
¢þ
>WENV181228923
OFEI01003676
[OFEI] insect metagenome; insect
375
451
+
Val
GAC
[ENA]
¢þ
>WENV181228934
OFEI01009095
[OFEI] insect metagenome; insect
376
302
-
Thr
TGT
[ENA]
¢þ
>WENV181228925
OFEI01004588
[OFEI] insect metagenome; insect
377
306
-
Glu
TTC
[ENA]
¢þ
>WENV181228930
OFEI01006146
[OFEI] insect metagenome; insect
378
453
+
Ala
TGC
[ENA]
¢þ
>WENV181228916
OFEI01000728
[OFEI] insect metagenome; insect
385
460
+
Ala
GGC
[ENA]
¢þ
>WENV181228917
OFEI01000998
[OFEI] insect metagenome; insect
389
464
+
Phe
GAA
[ENA]
¢þ
>WENV181228914
OFEI01000636
[OFEI] insect metagenome; insect
451
375
-
Pro
TGG
[ENA]
¢þ
>WENV181228926
OFEI01004821
[OFEI] insect metagenome; insect
475
548
+
Thr
AGT
[ENA]
¢þ
>WENV181228927
OFEI01005246
[OFEI] insect metagenome; insect
503
577
+
Val
TAC
[ENA]
¢þ
>WENV181228913
OFEI01000636
[OFEI] insect metagenome; insect
569
483
-
Leu
CAG
[ENA]
¢þ
>WENV181228912
OFEI01000636
[OFEI] insect metagenome; insect
672
597
-
His
GTG
[ENA]
¢þ
>WENV181228921
OFEI01002785
[OFEI] insect metagenome; insect
704
633
-
Gly
TCC
[ENA]
¢þ
>WENV181228911
OFEI01000636
[OFEI] insect metagenome; insect
841
765
-
Arg
CCG
[ENA]
¢þ
>WENV181228876
OFEI01000030
[OFEI] insect metagenome; insect
921
846
-
Asn
GTT
[ENA]
¢þ
>WENV181228918
OFEI01001170
[OFEI] insect metagenome; insect
1058
982
-
Ile2
CAT
[ENA]
¢þ
>WENV181228915
OFEI01000705
[OFEI] insect metagenome; insect
1076
1001
-
Asn
GTT
[ENA]
¢þ
>WENV181228889
OFEI01000162
[OFEI] insect metagenome; insect
1339
1263
-
Pro
GGG
[ENA]
¢þ
>WENV181228908
OFEI01000393
[OFEI] insect metagenome; insect
1507
1594
+
Ser
GGA
[ENA]
¢þ
>WENV181228903
OFEI01000306
[OFEI] insect metagenome; insect
1695
1621
-
Gln
CTG
[ENA]
¢þ
>WENV181228902
OFEI01000306
[OFEI] insect metagenome; insect
1779
1703
-
Met
CAT
[ENA]
¢þ
>WENV181228895
OFEI01000280
[OFEI] insect metagenome; insect
1857
1932
+
Glu
TTC
[ENA]
¢þ
>WENV181228901
OFEI01000306
[OFEI] insect metagenome; insect
1894
1822
-
Gln
TTG
[ENA]
¢þ
>WENV181228900
OFEI01000306
[OFEI] insect metagenome; insect
2002
1918
-
Leu
TAG
[ENA]
¢þ
>WENV181228904
OFEI01000376
[OFEI] insect metagenome; insect
2865
2940
+
Lys
TTT
[ENA]
¢þ
>WENV181228905
OFEI01000376
[OFEI] insect metagenome; insect
2987
3062
+
Val
TAC
[ENA]
¢þ
>WENV181228910
OFEI01000395
[OFEI] insect metagenome; insect
3013
2938
-
Trp
CCA
[ENA]
¢þ
>WENV181228909
OFEI01000395
[OFEI] insect metagenome; insect
3097
3021
-
Asp
GTC
[ENA]
¢þ
>WENV181228906
OFEI01000376
[OFEI] insect metagenome; insect
3177
3252
+
Val
TAC
[ENA]
¢þ
>WENV181228907
OFEI01000376
[OFEI] insect metagenome; insect
3257
3332
+
Lys
TTT
[ENA]
¢þ
>WENV181228871
OFEI01000027
[OFEI] insect metagenome; insect
3380
3454
+
Arg
CCT
[ENA]
¢þ
>WENV181228896
OFEI01000283
[OFEI] insect metagenome; insect
3827
3902
+
Thr
TGT
[ENA]
¢þ
>WENV181228897
OFEI01000283
[OFEI] insect metagenome; insect
3913
3997
+
Tyr
GTA
[ENA]
¢þ
>WENV181228891
OFEI01000273
[OFEI] insect metagenome; insect
3967
4042
+
Thr
TGT
[ENA]
¢þ
>WENV181228892
OFEI01000273
[OFEI] insect metagenome; insect
4063
4147
+
Tyr
GTA
[ENA]
¢þ
>WENV181228898
OFEI01000283
[OFEI] insect metagenome; insect
4181
4255
+
Gly
TCC
[ENA]
¢þ
>WENV181228899
OFEI01000283
[OFEI] insect metagenome; insect
4261
4336
+
Thr
GGT
[ENA]
¢þ
>WENV181228893
OFEI01000273
[OFEI] insect metagenome; insect
4362
4436
+
Gly
TCC
[ENA]
¢þ
>WENV181228886
OFEI01000121
[OFEI] insect metagenome; insect
4421
4335
-
Leu
TAA
[ENA]
¢þ
>WENV181228894
OFEI01000273
[OFEI] insect metagenome; insect
4443
4518
+
Thr
GGT
[ENA]
¢þ
>WENV181228885
OFEI01000121
[OFEI] insect metagenome; insect
4507
4434
-
Cys
GCA
[ENA]
¢þ
>WENV181228888
OFEI01000158
[OFEI] insect metagenome; insect
5501
5577
+
fMet
CAT
[ENA]
¢þ
>WENV181228880
OFEI01000051
[OFEI] insect metagenome; insect
5853
5939
+
Leu
GAG
[ENA]
¢þ
>WENV181228890
OFEI01000209
[OFEI] insect metagenome; insect
5863
5780
-
Leu
CAA
[ENA]
¢þ
>WENV181228881
OFEI01000051
[OFEI] insect metagenome; insect
5988
6064
+
fMet
CAT
[ENA]
¢þ
>WENV181228887
OFEI01000151
[OFEI] insect metagenome; insect
6668
6743
+
Gly
GCC
[ENA]
¢þ
>WENV181228883
OFEI01000079
[OFEI] insect metagenome; insect
9071
9163
+
Ser
GCT
[ENA]
¢þ
>WENV181228884
OFEI01000079
[OFEI] insect metagenome; insect
9168
9244
+
Arg
ACG
[ENA]
¢þ
>WENV181228882
OFEI01000075
[OFEI] insect metagenome; insect
9653
9566
-
Ser
TGA
[ENA]
¢þ
>WENV181228856
OFEI01000007
[OFEI] insect metagenome; insect
16375
16451
+
Asp
GTC
[ENA]
¢þ
>WENV181228839
OFEI01000003
[OFEI] insect metagenome; insect
17422
17337
-
Leu
CAA
[ENA]
¢þ
>WENV181228879
OFEI01000048
[OFEI] insect metagenome; insect
20191
20278
+
Ser
GGA
[ENA]
¢þ
>WENV181228873
OFEI01000028
[OFEI] insect metagenome; insect
20341
20428
+
Ser
TGA
[ENA]
¢þ
>WENV181228878
OFEI01000042
[OFEI] insect metagenome; insect
22664
22588
-
Ile2
CAT
[ENA]
¢þ
>WENV181228874
OFEI01000028
[OFEI] insect metagenome; insect
26150
26223
+
Cys
GCA
[ENA]
¢þ
>WENV181228875
OFEI01000028
[OFEI] insect metagenome; insect
26230
26316
+
Leu
TAA
[ENA]
¢þ
>WENV181228872
OFEI01000027
[OFEI] insect metagenome; insect
26624
26548
-
Arg
TCT
[ENA]
¢þ
>WENV181228877
OFEI01000031
[OFEI] insect metagenome; insect
40549
40473
-
Arg
TCT
[ENA]
¢þ
>WENV181228867
OFEI01000025
[OFEI] insect metagenome; insect
42712
42804
+
Ser
GCT
[ENA]
¢þ
>WENV181228868
OFEI01000025
[OFEI] insect metagenome; insect
42810
42886
+
Arg
ACG
[ENA]
¢þ
>WENV181228869
OFEI01000025
[OFEI] insect metagenome; insect
42934
43010
+
Arg
ACG
[ENA]
¢þ
>WENV181228847
OFEI01000005
[OFEI] insect metagenome; insect
44806
44731
-
Lys
TTT
[ENA]
¢þ
>WENV181228846
OFEI01000005
[OFEI] insect metagenome; insect
44886
44811
-
Val
TAC
[ENA]
¢þ
>WENV181228845
OFEI01000005
[OFEI] insect metagenome; insect
44994
44919
-
Val
TAC
[ENA]
¢þ
>WENV181228844
OFEI01000005
[OFEI] insect metagenome; insect
45110
45035
-
Val
TAC
[ENA]
¢þ
>WENV181228865
OFEI01000016
[OFEI] insect metagenome; insect
46851
46767
-
Tyr
GTA
[ENA]
¢þ
>WENV181228840
OFEI01000005
[OFEI] insect metagenome; insect
47466
47541
+
Ala
GGC
[ENA]
¢þ
>WENV181228841
OFEI01000005
[OFEI] insect metagenome; insect
47590
47665
+
Ala
GGC
[ENA]
¢þ
>WENV181228864
OFEI01000015
[OFEI] insect metagenome; insect
55275
55199
-
fMet
CAT
[ENA]
¢þ
>WENV181228863
OFEI01000015
[OFEI] insect metagenome; insect
55377
55301
-
fMet
CAT
[ENA]
¢þ
>WENV181228866
OFEI01000020
[OFEI] insect metagenome; insect
58927
58851
-
Ile2
CAT
[ENA]
¢þ
>WENV181228838
OFEI01000003
[OFEI] insect metagenome; insect
60069
59993
-
fMet
CAT
[ENA]
¢þ
>WENV181228861
OFEI01000011
[OFEI] insect metagenome; insect
66448
66373
-
Phe
GAA
[ENA]
¢þ
>WENV181228843
OFEI01000005
[OFEI] insect metagenome; insect
67285
67211
-
Arg
CCT
[ENA]
¢þ
>WENV181228850
OFEI01000006
[OFEI] insect metagenome; insect
67508
67584
+
Pro
TGG
[ENA]
¢þ
>WENV181228862
OFEI01000014
[OFEI] insect metagenome; insect
71647
71722
+
Phe
GAA
[ENA]
¢þ
>WENV181228837
OFEI01000003
[OFEI] insect metagenome; insect
72811
72724
-
Leu
GAG
[ENA]
¢þ
>WENV181228859
OFEI01000011
[OFEI] insect metagenome; insect
84839
84914
+
Gly
GCC
[ENA]
¢þ
>WENV181228860
OFEI01000011
[OFEI] insect metagenome; insect
84957
85032
+
Gly
GCC
[ENA]
¢þ
>WENV181228834
OFEI01000002
[OFEI] insect metagenome; insect
86092
86167
+
Asn
GTT
[ENA]
¢þ
>WENV181228858
OFEI01000010
[OFEI] insect metagenome; insect
94563
94487
-
Val
GAC
[ENA]
¢þ
>WENV181228857
OFEI01000010
[OFEI] insect metagenome; insect
94657
94581
-
Val
GAC
[ENA]
¢þ
>WENV181228851
OFEI01000006
[OFEI] insect metagenome; insect
95672
95748
+
Arg
CCG
[ENA]
¢þ
>WENV181228852
OFEI01000006
[OFEI] insect metagenome; insect
95832
95907
+
His
GTG
[ENA]
¢þ
>WENV181228853
OFEI01000006
[OFEI] insect metagenome; insect
95923
96009
+
Leu
CAG
[ENA]
¢þ
>WENV181228854
OFEI01000006
[OFEI] insect metagenome; insect
96041
96117
+
Pro
TGG
[ENA]
¢þ
>WENV181228835
OFEI01000002
[OFEI] insect metagenome; insect
96159
96234
+
Asn
GTT
[ENA]
¢þ
>WENV181228836
OFEI01000002
[OFEI] insect metagenome; insect
121454
121529
+
Asn
GTT
[ENA]
¢þ
>WENV181228833
OFEI01000001
[OFEI] insect metagenome; insect
135985
135909
-
Arg
TCT
[ENA]
¢þ
>WENV181228832
OFEI01000001
[OFEI] insect metagenome; insect
161443
161369
-
Gln
TTG
[ENA]
¢þ
>WENV181228831
OFEI01000001
[OFEI] insect metagenome; insect
161560
161476
-
Leu
TAG
[ENA]
¢þ
>WENV181228830
OFEI01000001
[OFEI] insect metagenome; insect
161646
161570
-
Met
CAT
[ENA]
¢þ
>WENV181228829
OFEI01000001
[OFEI] insect metagenome; insect
161744
161670
-
Gln
TTG
[ENA]
¢þ
>WENV181228828
OFEI01000001
[OFEI] insect metagenome; insect
161845
161771
-
Gln
TTG
[ENA]
¢þ
>WENV181228827
OFEI01000001
[OFEI] insect metagenome; insect
161960
161876
-
Leu
TAG
[ENA]
¢þ
>WENV181228826
OFEI01000001
[OFEI] insect metagenome; insect
162046
161970
-
Met
CAT
[ENA]
¢þ
>WENV181228842
OFEI01000005
[OFEI] insect metagenome; insect
166535
166459
-
Pro
GGG
[ENA]
¢þ
>WENV181228824
OFEI01000001
[OFEI] insect metagenome; insect
208427
208502
+
Lys
TTT
[ENA]
¢þ
>WENV181228825
OFEI01000001
[OFEI] insect metagenome; insect
208541
208616
+
Lys
TTT
[ENA]
¢þ
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
View ClustalW result
BACK