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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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HOW TO USE
tRNA gene List
[OFQQ] wastewater metagenome; River Agogna
HIT:
6 sequence(s).
Download Sequence
View ClustalW result
The reliable tRNA genes
All candidate tRNA genes
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
>WENV181369742
OFQQ01000005
[OFQQ] wastewater metagenome; River Agogna
118
43
-
Ala
TGC
[ENA]
¢þ
>WENV181369744
OFQQ01001139
[OFQQ] wastewater metagenome; River Agogna
184
269
+
Tyr
GTA
[ENA]
¢þ
>WENV181369741
OFQQ01000005
[OFQQ] wastewater metagenome; River Agogna
217
141
-
Ile
GAT
[ENA]
¢þ
>WENV181369743
OFQQ01000889
[OFQQ] wastewater metagenome; River Agogna
305
224
-
Tyr
GTA
[ENA]
¢þ
>WENV181369740
OFQQ01000005
[OFQQ] wastewater metagenome; River Agogna
322
247
-
Ala
TGC
[ENA]
¢þ
>WENV181369745
OFQQ01001408
[OFQQ] wastewater metagenome; River Agogna
393
477
+
Leu
CAG
[ENA]
¢þ
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
View ClustalW result
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