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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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HOW TO USE
tRNA gene List
[OGCD] insect metagenome; haemolymph
HIT:
65 sequence(s).
Download Sequence
View ClustalW result
The reliable tRNA genes
All candidate tRNA genes
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
>WENV181405333
OGCD01022842
[OGCD] insect metagenome; haemolymph
215
290
+
Arg
TCT
[ENA]
¢þ
>WENV181405295
OGCD01000134
[OGCD] insect metagenome; haemolymph
224
149
-
Ala
TGC
[ENA]
¢þ
>WENV181405314
OGCD01000467
[OGCD] insect metagenome; haemolymph
258
341
+
Leu
GAG
[ENA]
¢þ
>WENV181405330
OGCD01007185
[OGCD] insect metagenome; haemolymph
275
358
+
Leu
TAA
[ENA]
¢þ
>WENV181405292
OGCD01000059
[OGCD] insect metagenome; haemolymph
304
211
-
Ser
GCT
[ENA]
¢þ
>WENV181405332
OGCD01014883
[OGCD] insect metagenome; haemolymph
304
221
-
Ser
TGA
[ENA]
¢þ
>WENV181405317
OGCD01000510
[OGCD] insect metagenome; haemolymph
330
258
-
Ala
TGC
[ENA]
¢þ
>WENV181405320
OGCD01000535
[OGCD] insect metagenome; haemolymph
331
405
+
Phe
GAA
[ENA]
¢þ
>WENV181405304
OGCD01000303
[OGCD] insect metagenome; haemolymph
359
283
-
Gly
GCC
[ENA]
¢þ
>WENV181405331
OGCD01009792
[OGCD] insect metagenome; haemolymph
366
437
+
Glu
TTC
[ENA]
¢þ
>WENV181405316
OGCD01000510
[OGCD] insect metagenome; haemolymph
438
362
-
Ile
GAT
[ENA]
¢þ
>WENV181405329
OGCD01001196
[OGCD] insect metagenome; haemolymph
474
401
-
Thr
GGT
[ENA]
¢þ
>WENV181405324
OGCD01000749
[OGCD] insect metagenome; haemolymph
729
813
+
Ser
GGA
[ENA]
¢þ
>WENV181405279
OGCD01000014
[OGCD] insect metagenome; haemolymph
787
714
-
Phe
GAA
[ENA]
¢þ
>WENV181405328
OGCD01001092
[OGCD] insect metagenome; haemolymph
928
854
-
Thr
GGT
[ENA]
¢þ
>WENV181405296
OGCD01000136
[OGCD] insect metagenome; haemolymph
956
881
-
Arg
TCT
[ENA]
¢þ
>WENV181405277
OGCD01000013
[OGCD] insect metagenome; haemolymph
1000
928
-
Cys
GCA
[ENA]
¢þ
>WENV181405327
OGCD01001092
[OGCD] insect metagenome; haemolymph
1006
936
-
Gly
TCC
[ENA]
¢þ
>WENV181405326
OGCD01001092
[OGCD] insect metagenome; haemolymph
1114
1033
-
Tyr
GTA
[ENA]
¢þ
>WENV181405315
OGCD01000500
[OGCD] insect metagenome; haemolymph
1131
1056
-
Asp
GTC
[ENA]
¢þ
>WENV181405303
OGCD01000250
[OGCD] insect metagenome; haemolymph
1133
1060
-
Gln
TTG
[ENA]
¢þ
>WENV181405325
OGCD01001092
[OGCD] insect metagenome; haemolymph
1201
1129
-
Thr
TGT
[ENA]
¢þ
>WENV181405302
OGCD01000250
[OGCD] insect metagenome; haemolymph
1244
1161
-
Leu
TAG
[ENA]
¢þ
>WENV181405287
OGCD01000030
[OGCD] insect metagenome; haemolymph
1282
1358
+
Pro
TGG
[ENA]
¢þ
>WENV181405294
OGCD01000127
[OGCD] insect metagenome; haemolymph
1282
1367
+
Leu
TAA
[ENA]
¢þ
>WENV181405301
OGCD01000250
[OGCD] insect metagenome; haemolymph
1331
1255
-
Met
CAT
[ENA]
¢þ
>WENV181405323
OGCD01000586
[OGCD] insect metagenome; haemolymph
1569
1645
+
fMet
CAT
[ENA]
¢þ
>WENV181405310
OGCD01000369
[OGCD] insect metagenome; haemolymph
1579
1504
-
Pro
TGG
[ENA]
¢þ
>WENV181405309
OGCD01000369
[OGCD] insect metagenome; haemolymph
1667
1594
-
His
GTG
[ENA]
¢þ
>WENV181405308
OGCD01000369
[OGCD] insect metagenome; haemolymph
1799
1724
-
Arg
CCG
[ENA]
¢þ
>WENV181405321
OGCD01000566
[OGCD] insect metagenome; haemolymph
1989
2070
+
Tyr
GTA
[ENA]
¢þ
>WENV181405313
OGCD01000442
[OGCD] insect metagenome; haemolymph
2066
1980
-
Ser
TGA
[ENA]
¢þ
>WENV181405322
OGCD01000566
[OGCD] insect metagenome; haemolymph
2074
2146
+
Gly
TCC
[ENA]
¢þ
>WENV181405319
OGCD01000523
[OGCD] insect metagenome; haemolymph
2175
2099
-
Arg
ACG
[ENA]
¢þ
>WENV181405311
OGCD01000442
[OGCD] insect metagenome; haemolymph
2218
2289
+
Cys
GCA
[ENA]
¢þ
>WENV181405318
OGCD01000523
[OGCD] insect metagenome; haemolymph
2289
2198
-
Ser
GCT
[ENA]
¢þ
>WENV181405312
OGCD01000442
[OGCD] insect metagenome; haemolymph
2306
2389
+
Leu
TAA
[ENA]
¢þ
>WENV181405305
OGCD01000323
[OGCD] insect metagenome; haemolymph
2353
2427
+
Gln
TTG
[ENA]
¢þ
>WENV181405293
OGCD01000070
[OGCD] insect metagenome; haemolymph
2458
2382
-
Met
CAT
[ENA]
¢þ
>WENV181405307
OGCD01000331
[OGCD] insect metagenome; haemolymph
2505
2430
-
Asn
GTT
[ENA]
¢þ
>WENV181405282
OGCD01000016
[OGCD] insect metagenome; haemolymph
2554
2479
-
Thr
TGT
[ENA]
¢þ
>WENV181405306
OGCD01000331
[OGCD] insect metagenome; haemolymph
2640
2712
+
Ile2
CAT
[ENA]
¢þ
>WENV181405300
OGCD01000234
[OGCD] insect metagenome; haemolymph
3011
2937
-
Trp
CCA
[ENA]
¢þ
>WENV181405290
OGCD01000046
[OGCD] insect metagenome; haemolymph
3084
2998
-
Leu
GAG
[ENA]
¢þ
>WENV181405299
OGCD01000227
[OGCD] insect metagenome; haemolymph
3266
3191
-
Lys
CTT
[ENA]
¢þ
>WENV181405298
OGCD01000210
[OGCD] insect metagenome; haemolymph
3644
3572
-
Glu
TTC
[ENA]
¢þ
>WENV181405286
OGCD01000029
[OGCD] insect metagenome; haemolymph
4044
3972
-
Lys
TTT
[ENA]
¢þ
>WENV181405285
OGCD01000029
[OGCD] insect metagenome; haemolymph
4126
4052
-
Val
TAC
[ENA]
¢þ
>WENV181405297
OGCD01000144
[OGCD] insect metagenome; haemolymph
4892
4965
+
Ile
GAT
[ENA]
¢þ
>WENV181405283
OGCD01000028
[OGCD] insect metagenome; haemolymph
5066
4992
-
Met
CAT
[ENA]
¢þ
>WENV181405274
OGCD01000008
[OGCD] insect metagenome; haemolymph
5124
5209
+
Leu
CAG
[ENA]
¢þ
>WENV181405284
OGCD01000029
[OGCD] insect metagenome; haemolymph
6036
6110
+
Ala
GGC
[ENA]
¢þ
>WENV181405278
OGCD01000014
[OGCD] insect metagenome; haemolymph
6149
6225
+
Asp
GTC
[ENA]
¢þ
>WENV181405280
OGCD01000015
[OGCD] insect metagenome; haemolymph
6925
6998
+
Lys
TTT
[ENA]
¢þ
>WENV181405288
OGCD01000041
[OGCD] insect metagenome; haemolymph
8081
8155
+
Arg
CCG
[ENA]
¢þ
>WENV181405276
OGCD01000013
[OGCD] insect metagenome; haemolymph
8317
8400
+
Leu
TAG
[ENA]
¢þ
>WENV181405291
OGCD01000051
[OGCD] insect metagenome; haemolymph
8895
8820
-
His
GTG
[ENA]
¢þ
>WENV181405281
OGCD01000015
[OGCD] insect metagenome; haemolymph
9614
9687
+
Val
GAC
[ENA]
¢þ
>WENV181405289
OGCD01000041
[OGCD] insect metagenome; haemolymph
9843
9915
+
Val
TAC
[ENA]
¢þ
>WENV181405275
OGCD01000008
[OGCD] insect metagenome; haemolymph
10408
10491
+
Leu
CAA
[ENA]
¢þ
>WENV181405269
OGCD01000001
[OGCD] insect metagenome; haemolymph
14500
14576
+
fMet
CAT
[ENA]
¢þ
>WENV181405272
OGCD01000002
[OGCD] insect metagenome; haemolymph
20516
20442
-
Arg
ACG
[ENA]
¢þ
>WENV181405271
OGCD01000002
[OGCD] insect metagenome; haemolymph
20762
20690
-
Glu
TTC
[ENA]
¢þ
>WENV181405270
OGCD01000001
[OGCD] insect metagenome; haemolymph
21513
21440
-
Gly
GCC
[ENA]
¢þ
>WENV181405273
OGCD01000003
[OGCD] insect metagenome; haemolymph
26487
26559
+
Asn
GTT
[ENA]
¢þ
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
View ClustalW result
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