This is the navigation skips to jump to main contents
Jump to main contents.
tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
Top
|
Keyword
|
BLAST
|
Download
|
HOW TO USE
tRNA gene List
[OGSW] human gut metagenome; fecal sample 5 from infant 2
HIT:
127 sequence(s).
Download Sequence
View ClustalW result
The reliable tRNA genes
All candidate tRNA genes
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
>WENV181810846
OGSW01002304
[OGSW] human gut metagenome; fecal sample 5 from infant 2
2
76
+
Asn
GTT
[ENA]
¢þ
>WENV181810866
OGSW01002807
[OGSW] human gut metagenome; fecal sample 5 from infant 2
59
133
+
Lys
TTT
[ENA]
¢þ
>WENV181810835
OGSW01001735
[OGSW] human gut metagenome; fecal sample 5 from infant 2
67
141
+
Ala
TGC
[ENA]
¢þ
>WENV181810782
OGSW01000008
[OGSW] human gut metagenome; fecal sample 5 from infant 2
68
143
+
Lys
TTT
[ENA]
¢þ
>WENV181810834
OGSW01000813
[OGSW] human gut metagenome; fecal sample 5 from infant 2
71
161
+
Ser
GCT
[ENA]
¢þ
>WENV181810859
OGSW01002806
[OGSW] human gut metagenome; fecal sample 5 from infant 2
80
156
+
Arg
TCT
[ENA]
¢þ
>WENV181810847
OGSW01002304
[OGSW] human gut metagenome; fecal sample 5 from infant 2
82
168
+
Leu
TAA
[ENA]
¢þ
>WENV181810826
OGSW01000042
[OGSW] human gut metagenome; fecal sample 5 from infant 2
86
161
+
Lys
TTT
[ENA]
¢þ
>WENV181810830
OGSW01000455
[OGSW] human gut metagenome; fecal sample 5 from infant 2
104
179
+
Ala
TGC
[ENA]
¢þ
>WENV181810805
OGSW01000025
[OGSW] human gut metagenome; fecal sample 5 from infant 2
104
180
+
Asp
GTC
[ENA]
¢þ
>WENV181810883
OGSW01003804
[OGSW] human gut metagenome; fecal sample 5 from infant 2
115
42
-
His
GTG
[ENA]
¢þ
>WENV181810858
OGSW01002707
[OGSW] human gut metagenome; fecal sample 5 from infant 2
130
40
-
Ser
GCT
[ENA]
¢þ
>WENV181810829
OGSW01000161
[OGSW] human gut metagenome; fecal sample 5 from infant 2
134
59
-
Lys
TTT
[ENA]
¢þ
>WENV181810876
OGSW01003451
[OGSW] human gut metagenome; fecal sample 5 from infant 2
138
62
-
Glu
CTC
[ENA]
¢þ
>WENV181810867
OGSW01002807
[OGSW] human gut metagenome; fecal sample 5 from infant 2
148
231
+
Leu
TAG
[ENA]
¢þ
>WENV181810836
OGSW01001735
[OGSW] human gut metagenome; fecal sample 5 from infant 2
163
238
+
Met
CAT
[ENA]
¢þ
>WENV181810860
OGSW01002806
[OGSW] human gut metagenome; fecal sample 5 from infant 2
166
241
+
Gln
TTG
[ENA]
¢þ
>WENV181810848
OGSW01002304
[OGSW] human gut metagenome; fecal sample 5 from infant 2
183
258
+
fMet
CAT
[ENA]
¢þ
>WENV181810882
OGSW01003804
[OGSW] human gut metagenome; fecal sample 5 from infant 2
225
152
-
Trp
CCA
[ENA]
¢þ
>WENV181810868
OGSW01002807
[OGSW] human gut metagenome; fecal sample 5 from infant 2
237
312
+
Thr
TGT
[ENA]
¢þ
>WENV181810806
OGSW01000025
[OGSW] human gut metagenome; fecal sample 5 from infant 2
237
312
+
Trp
CCA
[ENA]
¢þ
>WENV181810875
OGSW01003451
[OGSW] human gut metagenome; fecal sample 5 from infant 2
243
170
-
Gln
CTG
[ENA]
¢þ
>WENV181810861
OGSW01002806
[OGSW] human gut metagenome; fecal sample 5 from infant 2
253
328
+
Lys
TTT
[ENA]
¢þ
>WENV181810837
OGSW01001735
[OGSW] human gut metagenome; fecal sample 5 from infant 2
257
332
+
Ile2
CAT
[ENA]
¢þ
>WENV181810796
OGSW01000018
[OGSW] human gut metagenome; fecal sample 5 from infant 2
261
186
-
Lys
TTT
[ENA]
¢þ
>WENV181810849
OGSW01002304
[OGSW] human gut metagenome; fecal sample 5 from infant 2
266
340
+
Glu
TTC
[ENA]
¢þ
>WENV181810874
OGSW01003405
[OGSW] human gut metagenome; fecal sample 5 from infant 2
278
196
-
Leu
CAA
[ENA]
¢þ
>WENV181810881
OGSW01003804
[OGSW] human gut metagenome; fecal sample 5 from infant 2
311
229
-
Tyr
GTA
[ENA]
¢þ
>WENV181810869
OGSW01002807
[OGSW] human gut metagenome; fecal sample 5 from infant 2
317
388
+
Gly
GCC
[ENA]
¢þ
>WENV181810862
OGSW01002806
[OGSW] human gut metagenome; fecal sample 5 from infant 2
331
419
+
Ser
TGA
[ENA]
¢þ
>WENV181810850
OGSW01002304
[OGSW] human gut metagenome; fecal sample 5 from infant 2
350
423
+
Gly
TCC
[ENA]
¢þ
>WENV181810838
OGSW01001735
[OGSW] human gut metagenome; fecal sample 5 from infant 2
365
454
+
Ser
TGA
[ENA]
¢þ
>WENV181810884
OGSW01004263
[OGSW] human gut metagenome; fecal sample 5 from infant 2
372
300
-
Thr
GGT
[ENA]
¢þ
>WENV181810880
OGSW01003804
[OGSW] human gut metagenome; fecal sample 5 from infant 2
388
316
-
Phe
GAA
[ENA]
¢þ
>WENV181810870
OGSW01002807
[OGSW] human gut metagenome; fecal sample 5 from infant 2
404
489
+
Leu
TAA
[ENA]
¢þ
>WENV181810863
OGSW01002806
[OGSW] human gut metagenome; fecal sample 5 from infant 2
423
498
+
Phe
GAA
[ENA]
¢þ
>WENV181810851
OGSW01002304
[OGSW] human gut metagenome; fecal sample 5 from infant 2
429
504
+
Val
TAC
[ENA]
¢þ
>WENV181810873
OGSW01003189
[OGSW] human gut metagenome; fecal sample 5 from infant 2
436
512
+
Asp
GTC
[ENA]
¢þ
>WENV181810856
OGSW01002680
[OGSW] human gut metagenome; fecal sample 5 from infant 2
446
537
+
Ser
GGA
[ENA]
¢þ
>WENV181810839
OGSW01001735
[OGSW] human gut metagenome; fecal sample 5 from infant 2
487
562
+
fMet
CAT
[ENA]
¢þ
>WENV181810845
OGSW01002275
[OGSW] human gut metagenome; fecal sample 5 from infant 2
493
402
-
Ser
GGA
[ENA]
¢þ
>WENV181810871
OGSW01002807
[OGSW] human gut metagenome; fecal sample 5 from infant 2
504
577
+
Arg
ACG
[ENA]
¢þ
>WENV181810878
OGSW01003727
[OGSW] human gut metagenome; fecal sample 5 from infant 2
505
579
+
Val
TAC
[ENA]
¢þ
>WENV181810864
OGSW01002806
[OGSW] human gut metagenome; fecal sample 5 from infant 2
506
580
+
Met
CAT
[ENA]
¢þ
>WENV181810879
OGSW01003804
[OGSW] human gut metagenome; fecal sample 5 from infant 2
509
434
-
Asp
GTC
[ENA]
¢þ
>WENV181810852
OGSW01002304
[OGSW] human gut metagenome; fecal sample 5 from infant 2
510
586
+
Asp
GTC
[ENA]
¢þ
>WENV181810877
OGSW01003611
[OGSW] human gut metagenome; fecal sample 5 from infant 2
587
512
-
Phe
GAA
[ENA]
¢þ
>WENV181810865
OGSW01002806
[OGSW] human gut metagenome; fecal sample 5 from infant 2
594
670
+
Ile2
CAT
[ENA]
¢þ
>WENV181810857
OGSW01002680
[OGSW] human gut metagenome; fecal sample 5 from infant 2
595
687
+
Ser
CGA
[ENA]
¢þ
>WENV181810853
OGSW01002304
[OGSW] human gut metagenome; fecal sample 5 from infant 2
596
670
+
Thr
TGT
[ENA]
¢þ
>WENV181810840
OGSW01001735
[OGSW] human gut metagenome; fecal sample 5 from infant 2
610
686
+
Asp
GTC
[ENA]
¢þ
>WENV181810831
OGSW01000585
[OGSW] human gut metagenome; fecal sample 5 from infant 2
655
744
+
Ser
CGA
[ENA]
¢þ
>WENV181810872
OGSW01002807
[OGSW] human gut metagenome; fecal sample 5 from infant 2
667
740
+
Pro
TGG
[ENA]
¢þ
>WENV181810854
OGSW01002304
[OGSW] human gut metagenome; fecal sample 5 from infant 2
685
769
+
Tyr
GTA
[ENA]
¢þ
>WENV181810841
OGSW01001735
[OGSW] human gut metagenome; fecal sample 5 from infant 2
688
758
+
Gly
TCC
[ENA]
¢þ
>WENV181810832
OGSW01000605
[OGSW] human gut metagenome; fecal sample 5 from infant 2
729
654
-
Arg
TCT
[ENA]
¢þ
>WENV181810842
OGSW01001735
[OGSW] human gut metagenome; fecal sample 5 from infant 2
767
842
+
Ile
GAT
[ENA]
¢þ
>WENV181810855
OGSW01002304
[OGSW] human gut metagenome; fecal sample 5 from infant 2
779
862
+
Leu
TAG
[ENA]
¢þ
>WENV181810823
OGSW01000036
[OGSW] human gut metagenome; fecal sample 5 from infant 2
796
723
-
Thr
CGT
[ENA]
¢þ
>WENV181810843
OGSW01001735
[OGSW] human gut metagenome; fecal sample 5 from infant 2
851
940
+
Ser
GCT
[ENA]
¢þ
>WENV181810833
OGSW01000669
[OGSW] human gut metagenome; fecal sample 5 from infant 2
916
843
-
Arg
CCG
[ENA]
¢þ
>WENV181810844
OGSW01001735
[OGSW] human gut metagenome; fecal sample 5 from infant 2
954
1027
+
Glu
TTC
[ENA]
¢þ
>WENV181810827
OGSW01000101
[OGSW] human gut metagenome; fecal sample 5 from infant 2
1760
1836
+
Ile
GAT
[ENA]
¢þ
>WENV181810828
OGSW01000101
[OGSW] human gut metagenome; fecal sample 5 from infant 2
1879
1954
+
Ala
TGC
[ENA]
¢þ
>WENV181810824
OGSW01000037
[OGSW] human gut metagenome; fecal sample 5 from infant 2
2751
2826
+
Ala
GGC
[ENA]
¢þ
>WENV181810825
OGSW01000037
[OGSW] human gut metagenome; fecal sample 5 from infant 2
2868
2943
+
Ala
GGC
[ENA]
¢þ
>WENV181810820
OGSW01000028
[OGSW] human gut metagenome; fecal sample 5 from infant 2
5643
5558
-
Leu
CAG
[ENA]
¢þ
>WENV181810819
OGSW01000028
[OGSW] human gut metagenome; fecal sample 5 from infant 2
5763
5677
-
Leu
CAG
[ENA]
¢þ
>WENV181810818
OGSW01000028
[OGSW] human gut metagenome; fecal sample 5 from infant 2
5883
5797
-
Leu
CAG
[ENA]
¢þ
>WENV181810817
OGSW01000028
[OGSW] human gut metagenome; fecal sample 5 from infant 2
6003
5917
-
Leu
CAG
[ENA]
¢þ
>WENV181810816
OGSW01000028
[OGSW] human gut metagenome; fecal sample 5 from infant 2
6123
6037
-
Leu
CAG
[ENA]
¢þ
>WENV181810815
OGSW01000028
[OGSW] human gut metagenome; fecal sample 5 from infant 2
6243
6157
-
Leu
CAG
[ENA]
¢þ
>WENV181810814
OGSW01000028
[OGSW] human gut metagenome; fecal sample 5 from infant 2
6363
6277
-
Leu
CAG
[ENA]
¢þ
>WENV181810813
OGSW01000028
[OGSW] human gut metagenome; fecal sample 5 from infant 2
6483
6397
-
Leu
CAG
[ENA]
¢þ
>WENV181810812
OGSW01000028
[OGSW] human gut metagenome; fecal sample 5 from infant 2
6603
6517
-
Leu
CAG
[ENA]
¢þ
>WENV181810811
OGSW01000028
[OGSW] human gut metagenome; fecal sample 5 from infant 2
6723
6637
-
Leu
CAG
[ENA]
¢þ
>WENV181810804
OGSW01000022
[OGSW] human gut metagenome; fecal sample 5 from infant 2
30399
30324
-
Thr
GGT
[ENA]
¢þ
>WENV181810822
OGSW01000036
[OGSW] human gut metagenome; fecal sample 5 from infant 2
30459
30383
-
Asp
GTC
[ENA]
¢þ
>WENV181810803
OGSW01000022
[OGSW] human gut metagenome; fecal sample 5 from infant 2
30480
30406
-
Gly
TCC
[ENA]
¢þ
>WENV181810802
OGSW01000022
[OGSW] human gut metagenome; fecal sample 5 from infant 2
30682
30598
-
Tyr
GTA
[ENA]
¢þ
>WENV181810801
OGSW01000022
[OGSW] human gut metagenome; fecal sample 5 from infant 2
30766
30691
-
Thr
TGT
[ENA]
¢þ
>WENV181810807
OGSW01000025
[OGSW] human gut metagenome; fecal sample 5 from infant 2
33203
33279
+
Arg
CCG
[ENA]
¢þ
>WENV181810808
OGSW01000025
[OGSW] human gut metagenome; fecal sample 5 from infant 2
33335
33410
+
His
GTG
[ENA]
¢þ
>WENV181810809
OGSW01000025
[OGSW] human gut metagenome; fecal sample 5 from infant 2
33433
33518
+
Leu
CAG
[ENA]
¢þ
>WENV181810810
OGSW01000025
[OGSW] human gut metagenome; fecal sample 5 from infant 2
33564
33640
+
Pro
TGG
[ENA]
¢þ
>WENV181810786
OGSW01000012
[OGSW] human gut metagenome; fecal sample 5 from infant 2
35106
35033
-
Gly
CCC
[ENA]
¢þ
>WENV181810800
OGSW01000022
[OGSW] human gut metagenome; fecal sample 5 from infant 2
38478
38402
-
Pro
TGG
[ENA]
¢þ
>WENV181810821
OGSW01000036
[OGSW] human gut metagenome; fecal sample 5 from infant 2
39889
39813
-
Asp
GTC
[ENA]
¢þ
>WENV181810799
OGSW01000021
[OGSW] human gut metagenome; fecal sample 5 from infant 2
49678
49603
-
Gly
GCC
[ENA]
¢þ
>WENV181810798
OGSW01000021
[OGSW] human gut metagenome; fecal sample 5 from infant 2
49790
49715
-
Gly
GCC
[ENA]
¢þ
>WENV181810784
OGSW01000011
[OGSW] human gut metagenome; fecal sample 5 from infant 2
56011
55935
-
Val
GAC
[ENA]
¢þ
>WENV181810783
OGSW01000011
[OGSW] human gut metagenome; fecal sample 5 from infant 2
56092
56016
-
Val
GAC
[ENA]
¢þ
>WENV181810769
OGSW01000004
[OGSW] human gut metagenome; fecal sample 5 from infant 2
56706
56781
+
Ile2
CAT
[ENA]
¢þ
>WENV181810781
OGSW01000007
[OGSW] human gut metagenome; fecal sample 5 from infant 2
62561
62655
+
SeC
TCA
[ENA]
¢þ
>WENV181810788
OGSW01000018
[OGSW] human gut metagenome; fecal sample 5 from infant 2
63469
63545
+
Met
CAT
[ENA]
¢þ
>WENV181810789
OGSW01000018
[OGSW] human gut metagenome; fecal sample 5 from infant 2
63554
63638
+
Leu
TAG
[ENA]
¢þ
>WENV181810790
OGSW01000018
[OGSW] human gut metagenome; fecal sample 5 from infant 2
63662
63736
+
Gln
TTG
[ENA]
¢þ
>WENV181810791
OGSW01000018
[OGSW] human gut metagenome; fecal sample 5 from infant 2
63769
63843
+
Gln
TTG
[ENA]
¢þ
>WENV181810792
OGSW01000018
[OGSW] human gut metagenome; fecal sample 5 from infant 2
63876
63950
+
Gln
TTG
[ENA]
¢þ
>WENV181810793
OGSW01000018
[OGSW] human gut metagenome; fecal sample 5 from infant 2
63968
64044
+
Met
CAT
[ENA]
¢þ
>WENV181810794
OGSW01000018
[OGSW] human gut metagenome; fecal sample 5 from infant 2
64085
64159
+
Gln
CTG
[ENA]
¢þ
>WENV181810795
OGSW01000018
[OGSW] human gut metagenome; fecal sample 5 from infant 2
64196
64270
+
Gln
CTG
[ENA]
¢þ
>WENV181810787
OGSW01000015
[OGSW] human gut metagenome; fecal sample 5 from infant 2
67923
68007
+
Leu
CAA
[ENA]
¢þ
>WENV181810797
OGSW01000021
[OGSW] human gut metagenome; fecal sample 5 from infant 2
78847
78922
+
Phe
GAA
[ENA]
¢þ
>WENV181810766
OGSW01000001
[OGSW] human gut metagenome; fecal sample 5 from infant 2
82314
82228
-
Leu
TAA
[ENA]
¢þ
>WENV181810765
OGSW01000001
[OGSW] human gut metagenome; fecal sample 5 from infant 2
82400
82327
-
Cys
GCA
[ENA]
¢þ
>WENV181810764
OGSW01000001
[OGSW] human gut metagenome; fecal sample 5 from infant 2
82522
82447
-
Gly
GCC
[ENA]
¢þ
>WENV181810777
OGSW01000006
[OGSW] human gut metagenome; fecal sample 5 from infant 2
88214
88301
+
Ser
GGA
[ENA]
¢þ
>WENV181810776
OGSW01000005
[OGSW] human gut metagenome; fecal sample 5 from infant 2
90692
90616
-
Arg
ACG
[ENA]
¢þ
>WENV181810775
OGSW01000005
[OGSW] human gut metagenome; fecal sample 5 from infant 2
90833
90757
-
Arg
ACG
[ENA]
¢þ
>WENV181810774
OGSW01000005
[OGSW] human gut metagenome; fecal sample 5 from infant 2
90974
90898
-
Arg
ACG
[ENA]
¢þ
>WENV181810773
OGSW01000005
[OGSW] human gut metagenome; fecal sample 5 from infant 2
91115
91039
-
Arg
ACG
[ENA]
¢þ
>WENV181810772
OGSW01000005
[OGSW] human gut metagenome; fecal sample 5 from infant 2
91212
91120
-
Ser
GCT
[ENA]
¢þ
>WENV181810778
OGSW01000006
[OGSW] human gut metagenome; fecal sample 5 from infant 2
91719
91806
+
Ser
GGA
[ENA]
¢þ
>WENV181810785
OGSW01000012
[OGSW] human gut metagenome; fecal sample 5 from infant 2
109671
109746
+
Phe
GAA
[ENA]
¢þ
>WENV181810767
OGSW01000002
[OGSW] human gut metagenome; fecal sample 5 from infant 2
120761
120845
+
Tyr
GTA
[ENA]
¢þ
>WENV181810780
OGSW01000006
[OGSW] human gut metagenome; fecal sample 5 from infant 2
141858
141771
-
Ser
TGA
[ENA]
¢þ
>WENV181810758
OGSW01000001
[OGSW] human gut metagenome; fecal sample 5 from infant 2
147722
147797
+
Asn
GTT
[ENA]
¢þ
>WENV181810779
OGSW01000006
[OGSW] human gut metagenome; fecal sample 5 from infant 2
148670
148583
-
Ser
TGA
[ENA]
¢þ
>WENV181810759
OGSW01000001
[OGSW] human gut metagenome; fecal sample 5 from infant 2
154247
154322
+
Asn
GTT
[ENA]
¢þ
>WENV181810771
OGSW01000004
[OGSW] human gut metagenome; fecal sample 5 from infant 2
169098
169022
-
fMet
CAT
[ENA]
¢þ
>WENV181810763
OGSW01000001
[OGSW] human gut metagenome; fecal sample 5 from infant 2
169785
169710
-
Asn
GTT
[ENA]
¢þ
>WENV181810770
OGSW01000004
[OGSW] human gut metagenome; fecal sample 5 from infant 2
171004
170918
-
Leu
GAG
[ENA]
¢þ
>WENV181810760
OGSW01000001
[OGSW] human gut metagenome; fecal sample 5 from infant 2
171505
171580
+
Asn
GTT
[ENA]
¢þ
>WENV181810768
OGSW01000003
[OGSW] human gut metagenome; fecal sample 5 from infant 2
183899
183975
+
Arg
TCT
[ENA]
¢þ
>WENV181810761
OGSW01000001
[OGSW] human gut metagenome; fecal sample 5 from infant 2
352530
352606
+
Pro
GGG
[ENA]
¢þ
>WENV181810762
OGSW01000001
[OGSW] human gut metagenome; fecal sample 5 from infant 2
469362
469434
+
Arg
CCT
[ENA]
¢þ
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
View ClustalW result
BACK