This is the navigation skips to jump to main contents
Jump to main contents.
tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
Top
|
Keyword
|
BLAST
|
Download
|
HOW TO USE
tRNA gene List
[OHDK] human gut metagenome; feces
HIT:
14 sequence(s).
Download Sequence
View ClustalW result
The reliable tRNA genes
All candidate tRNA genes
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
>WENV182041662
OHDK01000434
[OHDK] human gut metagenome; feces
50
135
+
Ser
TGA
[ENA]
¢þ
>WENV182041664
OHDK01000777
[OHDK] human gut metagenome; feces
94
19
-
Val
TAC
[ENA]
¢þ
>WENV182041663
OHDK01000701
[OHDK] human gut metagenome; feces
134
61
-
Gln
TTG
[ENA]
¢þ
>WENV182041661
OHDK01000396
[OHDK] human gut metagenome; feces
144
72
-
Glu
TTC
[ENA]
¢þ
>WENV182041665
OHDK01000909
[OHDK] human gut metagenome; feces
197
123
-
Ile2
CAT
[ENA]
¢þ
>WENV182041666
OHDK01000958
[OHDK] human gut metagenome; feces
271
196
-
Pro
TGG
[ENA]
¢þ
>WENV182041658
OHDK01000082
[OHDK] human gut metagenome; feces
323
397
+
Thr
TGT
[ENA]
¢þ
>WENV182041659
OHDK01000082
[OHDK] human gut metagenome; feces
415
499
+
Tyr
GTA
[ENA]
¢þ
>WENV182041660
OHDK01000082
[OHDK] human gut metagenome; feces
593
665
+
Thr
GGT
[ENA]
¢þ
>WENV182041657
OHDK01000026
[OHDK] human gut metagenome; feces
2033
2107
+
Ala
TGC
[ENA]
¢þ
>WENV182041655
OHDK01000019
[OHDK] human gut metagenome; feces
2139
2213
+
Ile
GAT
[ENA]
¢þ
>WENV182041656
OHDK01000019
[OHDK] human gut metagenome; feces
2223
2297
+
Ala
TGC
[ENA]
¢þ
>WENV182041653
OHDK01000009
[OHDK] human gut metagenome; feces
3195
3270
+
Asp
GTC
[ENA]
¢þ
>WENV182041654
OHDK01000009
[OHDK] human gut metagenome; feces
3277
3351
+
Val
TAC
[ENA]
¢þ
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
View ClustalW result
BACK