This is the navigation skips to jump to main contents
Jump to main contents.
tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
Top
|
Keyword
|
BLAST
|
Download
|
HOW TO USE
tRNA gene List
[OHDM] human gut metagenome; feces
HIT:
11 sequence(s).
Download Sequence
View ClustalW result
The reliable tRNA genes
All candidate tRNA genes
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
>WENV182041720
OHDM01000415
[OHDM] human gut metagenome; feces
131
204
+
fMet
CAT
[ENA]
¢þ
>WENV182041722
OHDM01000653
[OHDM] human gut metagenome; feces
160
233
+
Trp
CCA
[ENA]
¢þ
>WENV182041724
OHDM01001663
[OHDM] human gut metagenome; feces
324
396
+
Arg
CCT
[ENA]
¢þ
>WENV182041719
OHDM01000332
[OHDM] human gut metagenome; feces
376
300
-
Arg
CCT
[ENA]
¢þ
>WENV182041723
OHDM01000847
[OHDM] human gut metagenome; feces
380
305
-
Ala
GGC
[ENA]
¢þ
>WENV182041718
OHDM01000302
[OHDM] human gut metagenome; feces
553
479
-
Met
CAT
[ENA]
¢þ
>WENV182041721
OHDM01000578
[OHDM] human gut metagenome; feces
650
575
-
Arg
CCT
[ENA]
¢þ
>WENV182041717
OHDM01000133
[OHDM] human gut metagenome; feces
778
702
-
Ile
GAT
[ENA]
¢þ
>WENV182041716
OHDM01000133
[OHDM] human gut metagenome; feces
904
829
-
Ala
TGC
[ENA]
¢þ
>WENV182041715
OHDM01000077
[OHDM] human gut metagenome; feces
929
855
-
Ala
TGC
[ENA]
¢þ
>WENV182041714
OHDM01000077
[OHDM] human gut metagenome; feces
1093
1019
-
Ile
GAT
[ENA]
¢þ
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
View ClustalW result
BACK