This is the navigation skips to jump to main contents
Jump to main contents.
tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
Top
|
Keyword
|
BLAST
|
Download
|
HOW TO USE
tRNA gene List
[OHDO] human gut metagenome; feces
HIT:
15 sequence(s).
Download Sequence
View ClustalW result
The reliable tRNA genes
All candidate tRNA genes
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
>WENV182042822
OHDO01000259
[OHDO] human gut metagenome; feces
110
23
-
Leu
CAA
[ENA]
¢þ
>WENV182042827
OHDO01000570
[OHDO] human gut metagenome; feces
187
260
+
Trp
CCA
[ENA]
¢þ
>WENV182042825
OHDO01000564
[OHDO] human gut metagenome; feces
207
295
+
Ser
TGA
[ENA]
¢þ
>WENV182042829
OHDO01000707
[OHDO] human gut metagenome; feces
251
178
-
Trp
CCA
[ENA]
¢þ
>WENV182042823
OHDO01000394
[OHDO] human gut metagenome; feces
288
363
+
Lys
CTT
[ENA]
¢þ
>WENV182042830
OHDO01000712
[OHDO] human gut metagenome; feces
289
361
+
Thr
GGT
[ENA]
¢þ
>WENV182042820
OHDO01000038
[OHDO] human gut metagenome; feces
316
391
+
Ala
TGC
[ENA]
¢þ
>WENV182042826
OHDO01000564
[OHDO] human gut metagenome; feces
319
411
+
Ser
GCT
[ENA]
¢þ
>WENV182042831
OHDO01000837
[OHDO] human gut metagenome; feces
344
419
+
Ala
GGC
[ENA]
¢þ
>WENV182042828
OHDO01000657
[OHDO] human gut metagenome; feces
361
288
-
Trp
CCA
[ENA]
¢þ
>WENV182042824
OHDO01000394
[OHDO] human gut metagenome; feces
408
482
+
Glu
CTC
[ENA]
¢þ
>WENV182042821
OHDO01000038
[OHDO] human gut metagenome; feces
411
487
+
Ile
GAT
[ENA]
¢þ
>WENV182042819
OHDO01000020
[OHDO] human gut metagenome; feces
2260
2186
-
Pro
GGG
[ENA]
¢þ
>WENV182042818
OHDO01000006
[OHDO] human gut metagenome; feces
2748
2674
-
Ala
TGC
[ENA]
¢þ
>WENV182042817
OHDO01000006
[OHDO] human gut metagenome; feces
2839
2765
-
Ile
GAT
[ENA]
¢þ
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
View ClustalW result
BACK