This is the navigation skips to jump to main contents
Jump to main contents.
tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
Top
|
Keyword
|
BLAST
|
Download
|
HOW TO USE
tRNA gene List
[OHGE] human gut metagenome; feces
HIT:
46 sequence(s).
Download Sequence
View ClustalW result
The reliable tRNA genes
All candidate tRNA genes
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
>WENV182078992
OHGE01002899
[OHGE] human gut metagenome; feces
87
163
+
Asp
GTC
[ENA]
¢þ
>WENV182078987
OHGE01002210
[OHGE] human gut metagenome; feces
96
22
-
fMet
CAT
[ENA]
¢þ
>WENV182079002
OHGE01004043
[OHGE] human gut metagenome; feces
140
69
-
Gln
CTG
[ENA]
¢þ
>WENV182078975
OHGE01001046
[OHGE] human gut metagenome; feces
177
250
+
Phe
GAA
[ENA]
¢þ
>WENV182078993
OHGE01002899
[OHGE] human gut metagenome; feces
180
255
+
Phe
GAA
[ENA]
¢þ
>WENV182078996
OHGE01003384
[OHGE] human gut metagenome; feces
190
117
-
Pro
CGG
[ENA]
¢þ
>WENV182078988
OHGE01002328
[OHGE] human gut metagenome; feces
202
276
+
Val
TAC
[ENA]
¢þ
>WENV182078971
OHGE01000892
[OHGE] human gut metagenome; feces
220
303
+
Tyr
GTA
[ENA]
¢þ
>WENV182078994
OHGE01002899
[OHGE] human gut metagenome; feces
265
340
+
Gly
GCC
[ENA]
¢þ
>WENV182078981
OHGE01001527
[OHGE] human gut metagenome; feces
271
345
+
Arg
TCT
[ENA]
¢þ
>WENV182078978
OHGE01001067
[OHGE] human gut metagenome; feces
272
197
-
Thr
GGT
[ENA]
¢þ
>WENV182078997
OHGE01003737
[OHGE] human gut metagenome; feces
273
357
+
Leu
CAG
[ENA]
¢þ
>WENV182078989
OHGE01002328
[OHGE] human gut metagenome; feces
287
359
+
Thr
TGT
[ENA]
¢þ
>WENV182078999
OHGE01003878
[OHGE] human gut metagenome; feces
288
214
-
Glu
TTC
[ENA]
¢þ
>WENV182079001
OHGE01004015
[OHGE] human gut metagenome; feces
300
212
-
Ser
TGA
[ENA]
¢þ
>WENV182079003
OHGE01004256
[OHGE] human gut metagenome; feces
341
259
-
Leu
TAG
[ENA]
¢þ
>WENV182079000
OHGE01003926
[OHGE] human gut metagenome; feces
345
419
+
Pro
CGG
[ENA]
¢þ
>WENV182078995
OHGE01002899
[OHGE] human gut metagenome; feces
349
422
+
Cys
GCA
[ENA]
¢þ
>WENV182078986
OHGE01002151
[OHGE] human gut metagenome; feces
352
427
+
Asn
GTT
[ENA]
¢þ
>WENV182078984
OHGE01001635
[OHGE] human gut metagenome; feces
359
433
+
Asn
GTT
[ENA]
¢þ
>WENV182078982
OHGE01001527
[OHGE] human gut metagenome; feces
371
445
+
Arg
TCT
[ENA]
¢þ
>WENV182078974
OHGE01000952
[OHGE] human gut metagenome; feces
394
468
+
Trp
CCA
[ENA]
¢þ
>WENV182078972
OHGE01000905
[OHGE] human gut metagenome; feces
405
480
+
Lys
TTT
[ENA]
¢þ
>WENV182079004
OHGE01004533
[OHGE] human gut metagenome; feces
415
488
+
fMet
CAT
[ENA]
¢þ
>WENV182079005
OHGE01004639
[OHGE] human gut metagenome; feces
425
352
-
Thr
TGT
[ENA]
¢þ
>WENV182078973
OHGE01000945
[OHGE] human gut metagenome; feces
441
529
+
Ser
CGA
[ENA]
¢þ
>WENV182078998
OHGE01003878
[OHGE] human gut metagenome; feces
456
380
-
Met
CAT
[ENA]
¢þ
>WENV182078965
OHGE01000187
[OHGE] human gut metagenome; feces
473
545
+
Glu
TTC
[ENA]
¢þ
>WENV182078990
OHGE01002328
[OHGE] human gut metagenome; feces
491
565
+
fMet
CAT
[ENA]
¢þ
>WENV182078977
OHGE01001067
[OHGE] human gut metagenome; feces
505
423
-
Leu
TAG
[ENA]
¢þ
>WENV182078991
OHGE01002328
[OHGE] human gut metagenome; feces
596
670
+
Phe
GAA
[ENA]
¢þ
>WENV182078985
OHGE01001812
[OHGE] human gut metagenome; feces
617
691
+
His
GTG
[ENA]
¢þ
>WENV182078967
OHGE01000468
[OHGE] human gut metagenome; feces
620
704
+
Leu
CAA
[ENA]
¢þ
>WENV182078976
OHGE01001067
[OHGE] human gut metagenome; feces
630
539
-
Ser
GGA
[ENA]
¢þ
>WENV182078983
OHGE01001597
[OHGE] human gut metagenome; feces
678
592
-
Leu
CAG
[ENA]
¢þ
>WENV182078979
OHGE01001163
[OHGE] human gut metagenome; feces
691
761
+
Gly
TCC
[ENA]
¢þ
>WENV182078970
OHGE01000532
[OHGE] human gut metagenome; feces
701
777
+
Pro
GGG
[ENA]
¢þ
>WENV182078966
OHGE01000291
[OHGE] human gut metagenome; feces
749
675
-
Ile2
CAT
[ENA]
¢þ
>WENV182078962
OHGE01000073
[OHGE] human gut metagenome; feces
773
698
-
Ala
TGC
[ENA]
¢þ
>WENV182078980
OHGE01001163
[OHGE] human gut metagenome; feces
794
869
+
Arg
TCT
[ENA]
¢þ
>WENV182078969
OHGE01000483
[OHGE] human gut metagenome; feces
891
818
-
Lys
CTT
[ENA]
¢þ
>WENV182078968
OHGE01000483
[OHGE] human gut metagenome; feces
978
904
-
Cys
GCA
[ENA]
¢þ
>WENV182078963
OHGE01000076
[OHGE] human gut metagenome; feces
1120
1191
+
Gln
TTG
[ENA]
¢þ
>WENV182078964
OHGE01000106
[OHGE] human gut metagenome; feces
1855
1783
-
Arg
CCT
[ENA]
¢þ
>WENV182078960
OHGE01000019
[OHGE] human gut metagenome; feces
3524
3601
+
Ile
GAT
[ENA]
¢þ
>WENV182078961
OHGE01000019
[OHGE] human gut metagenome; feces
3682
3756
+
Ala
TGC
[ENA]
¢þ
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
View ClustalW result
BACK