This is the navigation skips to jump to main contents
Jump to main contents.
tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
Top
|
Keyword
|
BLAST
|
Download
|
HOW TO USE
tRNA gene List
[OHJV] human gut metagenome; feces
HIT:
19 sequence(s).
Download Sequence
View ClustalW result
The reliable tRNA genes
All candidate tRNA genes
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
>WENV182127610
OHJV01001441
[OHJV] human gut metagenome; feces
82
157
+
Pro
TGG
[ENA]
¢þ
>WENV182127612
OHJV01001701
[OHJV] human gut metagenome; feces
97
23
-
Cys
GCA
[ENA]
¢þ
>WENV182127597
OHJV01000067
[OHJV] human gut metagenome; feces
100
175
+
Ala
TGC
[ENA]
¢þ
>WENV182127609
OHJV01001157
[OHJV] human gut metagenome; feces
107
181
+
Ala
GGC
[ENA]
¢þ
>WENV182127604
OHJV01000388
[OHJV] human gut metagenome; feces
155
231
+
Met
CAT
[ENA]
¢þ
>WENV182127608
OHJV01000596
[OHJV] human gut metagenome; feces
221
296
+
Pro
GGG
[ENA]
¢þ
>WENV182127611
OHJV01001615
[OHJV] human gut metagenome; feces
246
328
+
Leu
TAG
[ENA]
¢þ
>WENV182127607
OHJV01000573
[OHJV] human gut metagenome; feces
282
354
+
Gly
CCC
[ENA]
¢þ
>WENV182127600
OHJV01000287
[OHJV] human gut metagenome; feces
333
241
-
Ser
GCT
[ENA]
¢þ
>WENV182127606
OHJV01000480
[OHJV] human gut metagenome; feces
406
334
-
Thr
GGT
[ENA]
¢þ
>WENV182127599
OHJV01000287
[OHJV] human gut metagenome; feces
451
364
-
Ser
TGA
[ENA]
¢þ
>WENV182127601
OHJV01000316
[OHJV] human gut metagenome; feces
512
437
-
Thr
CGT
[ENA]
¢þ
>WENV182127598
OHJV01000242
[OHJV] human gut metagenome; feces
561
490
-
Gln
TTG
[ENA]
¢þ
>WENV182127605
OHJV01000480
[OHJV] human gut metagenome; feces
580
497
-
Tyr
GTA
[ENA]
¢þ
>WENV182127596
OHJV01000047
[OHJV] human gut metagenome; feces
593
679
+
Leu
CAG
[ENA]
¢þ
>WENV182127603
OHJV01000387
[OHJV] human gut metagenome; feces
646
717
+
Gln
CTG
[ENA]
¢þ
>WENV182127602
OHJV01000320
[OHJV] human gut metagenome; feces
740
813
+
Ile2
CAT
[ENA]
¢þ
>WENV182127594
OHJV01000028
[OHJV] human gut metagenome; feces
1345
1421
+
Ile
GAT
[ENA]
¢þ
>WENV182127595
OHJV01000028
[OHJV] human gut metagenome; feces
1450
1524
+
Ala
TGC
[ENA]
¢þ
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
View ClustalW result
BACK