This is the navigation skips to jump to main contents
Jump to main contents.
tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
Top
|
Keyword
|
BLAST
|
Download
|
HOW TO USE
tRNA gene List
[OHOY] human gut metagenome; feces
HIT:
29 sequence(s).
Download Sequence
View ClustalW result
The reliable tRNA genes
All candidate tRNA genes
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
>WENV182191725
OHOY01003132
[OHOY] human gut metagenome; feces
87
14
-
Asp
GTC
[ENA]
¢þ
>WENV182191728
OHOY01004089
[OHOY] human gut metagenome; feces
105
20
-
Ser
TGA
[ENA]
¢þ
>WENV182191715
OHOY01001125
[OHOY] human gut metagenome; feces
110
39
-
Gly
GCC
[ENA]
¢þ
>WENV182191720
OHOY01002169
[OHOY] human gut metagenome; feces
136
62
-
Asp
GTC
[ENA]
¢þ
>WENV182191729
OHOY01004915
[OHOY] human gut metagenome; feces
212
141
-
Gln
CTG
[ENA]
¢þ
>WENV182191723
OHOY01002812
[OHOY] human gut metagenome; feces
256
184
-
Glu
CTC
[ENA]
¢þ
>WENV182191721
OHOY01002518
[OHOY] human gut metagenome; feces
368
450
+
Leu
TAG
[ENA]
¢þ
>WENV182191710
OHOY01000238
[OHOY] human gut metagenome; feces
398
327
-
Gln
TTG
[ENA]
¢þ
>WENV182191718
OHOY01001720
[OHOY] human gut metagenome; feces
402
476
+
Thr
TGT
[ENA]
¢þ
>WENV182191722
OHOY01002812
[OHOY] human gut metagenome; feces
408
321
-
Ser
GCT
[ENA]
¢þ
>WENV182191726
OHOY01003658
[OHOY] human gut metagenome; feces
419
347
-
Glu
TTC
[ENA]
¢þ
>WENV182191731
OHOY01006049
[OHOY] human gut metagenome; feces
427
499
+
Cys
GCA
[ENA]
¢þ
>WENV182191730
OHOY01005419
[OHOY] human gut metagenome; feces
472
546
+
Ala
GGC
[ENA]
¢þ
>WENV182191712
OHOY01000303
[OHOY] human gut metagenome; feces
534
461
-
Pro
CGG
[ENA]
¢þ
>WENV182191714
OHOY01001069
[OHOY] human gut metagenome; feces
604
692
+
Ser
GGA
[ENA]
¢þ
>WENV182191727
OHOY01003716
[OHOY] human gut metagenome; feces
608
682
+
Gly
CCC
[ENA]
¢þ
>WENV182191711
OHOY01000303
[OHOY] human gut metagenome; feces
620
547
-
Phe
GAA
[ENA]
¢þ
>WENV182191706
OHOY01000068
[OHOY] human gut metagenome; feces
639
722
+
Tyr
GTA
[ENA]
¢þ
>WENV182191717
OHOY01001625
[OHOY] human gut metagenome; feces
696
769
+
Lys
TTT
[ENA]
¢þ
>WENV182191719
OHOY01002130
[OHOY] human gut metagenome; feces
760
834
+
Arg
TCT
[ENA]
¢þ
>WENV182191716
OHOY01001309
[OHOY] human gut metagenome; feces
764
689
-
Pro
TGG
[ENA]
¢þ
>WENV182191724
OHOY01003132
[OHOY] human gut metagenome; feces
768
697
-
Cys
GCA
[ENA]
¢þ
>WENV182191707
OHOY01000068
[OHOY] human gut metagenome; feces
813
885
+
Thr
GGT
[ENA]
¢þ
>WENV182191713
OHOY01000454
[OHOY] human gut metagenome; feces
870
946
+
His
GTG
[ENA]
¢þ
>WENV182191705
OHOY01000065
[OHOY] human gut metagenome; feces
1158
1083
-
Gly
GCC
[ENA]
¢þ
>WENV182191709
OHOY01000145
[OHOY] human gut metagenome; feces
1678
1753
+
Val
TAC
[ENA]
¢þ
>WENV182191704
OHOY01000022
[OHOY] human gut metagenome; feces
2153
2079
-
Ala
TGC
[ENA]
¢þ
>WENV182191708
OHOY01000068
[OHOY] human gut metagenome; feces
2174
2247
+
Trp
CCA
[ENA]
¢þ
>WENV182191703
OHOY01000022
[OHOY] human gut metagenome; feces
2244
2170
-
Ile
GAT
[ENA]
¢þ
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
View ClustalW result
BACK