This is the navigation skips to jump to main contents
Jump to main contents.
tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
Top
|
Keyword
|
BLAST
|
Download
|
HOW TO USE
tRNA gene List
[OHTP] human gut metagenome; feces
HIT:
13 sequence(s).
Download Sequence
View ClustalW result
The reliable tRNA genes
All candidate tRNA genes
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
>WENV182263183
OHTP01000193
[OHTP] human gut metagenome; feces
36
109
+
Thr
TGT
[ENA]
¢þ
>WENV182263188
OHTP01001659
[OHTP] human gut metagenome; feces
125
52
-
Phe
GAA
[ENA]
¢þ
>WENV182263185
OHTP01000427
[OHTP] human gut metagenome; feces
135
207
+
Arg
CCT
[ENA]
¢þ
>WENV182263187
OHTP01001486
[OHTP] human gut metagenome; feces
140
213
+
Lys
TTT
[ENA]
¢þ
>WENV182263189
OHTP01002157
[OHTP] human gut metagenome; feces
377
450
+
Gly
CCC
[ENA]
¢þ
>WENV182263186
OHTP01001331
[OHTP] human gut metagenome; feces
393
322
-
Gln
TTG
[ENA]
¢þ
>WENV182263184
OHTP01000193
[OHTP] human gut metagenome; feces
848
935
+
Leu
TAA
[ENA]
¢þ
>WENV182263182
OHTP01000151
[OHTP] human gut metagenome; feces
971
883
-
Leu
TAA
[ENA]
¢þ
>WENV182263181
OHTP01000151
[OHTP] human gut metagenome; feces
1064
990
-
Val
TAC
[ENA]
¢þ
>WENV182263180
OHTP01000151
[OHTP] human gut metagenome; feces
1167
1094
-
Asp
GTC
[ENA]
¢þ
>WENV182263179
OHTP01000009
[OHTP] human gut metagenome; feces
2319
2393
+
Ile
GAT
[ENA]
¢þ
>WENV182263177
OHTP01000003
[OHTP] human gut metagenome; feces
3570
3646
+
Ile
GAT
[ENA]
¢þ
>WENV182263178
OHTP01000003
[OHTP] human gut metagenome; feces
3675
3749
+
Ala
TGC
[ENA]
¢þ
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
View ClustalW result
BACK